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author cpt
date Fri, 17 Jun 2022 13:00:50 +0000
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<?xml version="1.0"?>
<macros>
  <xml name="requirements">
    <requirements>
		<requirement type="package" version="3.8.13">python</requirement>
		<requirement type="package" version="1.79">biopython</requirement>
		<requirement type="package" version="1.2.2">cpt_gffparser</requirement>  
		<yield/>
    </requirements>
  </xml>
  <xml name="genome_selector">
	    <param name="genome_fasta" type="data" format="fasta" label="Source FASTA Sequence"/>
  </xml>
  <xml name="gff3_input">
    <param label="GFF3 Annotations" name="gff3_data" type="data" format="gff3"/>
  </xml>
  <token name="@GENOME_SELECTOR_PRE@">
		ln -s $genome_fasta genomeref.fa;
	</token>
	<token name="@GENOME_SELECTOR@">
		genomeref.fa
	</token>
</macros>