diff test-data/2.xmfa @ 1:bd1901839519 draft

planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:46:06 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/2.xmfa	Mon Jun 05 02:46:06 2023 +0000
@@ -0,0 +1,6309 @@
+#FormatVersion Mauve1
+#Sequence1File	dataset_662722.dat
+#Sequence1Entry	1
+#Sequence1Format	FastA
+#Sequence2File	dataset_662722.dat
+#Sequence2Entry	2
+#Sequence2Format	FastA
+#BackboneFile	/galaxy/database/files/000/662/dataset_662723.dat.bbcols
+> 1:83043-149557 - dataset_662722.dat
+acagtagtacctaacccgactccgaatatagttgtgtaatccttattcttgttcagtctaaaactaatcgcagtaggtaa
+gttggccttaatccgcccgcttacaatatctgcactaggatactgggtagccaccactaaatgtatacctgttttc-ctt
+gccttctgccctaaccgagcaatataatcttctacccctttgtcaacagcacgtaaatctgcatattcatctacaataca
+cactagatagggtaacggctcctccgctacttcattatacaaagataacaacttcgtacctttttccttcataagagcat
+atcgcttatccatctccattgtcagccctgctaatacttggcaagcttctttagcatctgtcactacgtctagtacgtgt
+ggactatcctcatacttacttagctctaccatagccgggtcaatcataataaactgtagcttttcaggtggatacattaa
+catcatgcttacaataatcacatttacgaagaccgacttaccgctacctgttgtccctgccaccaataaatgtacacatt
+cagtcaaagatagatagatcggctcccctagtgtatctacaccagccacgaacattaattctttttcttctaccatactg
+ataaactcctcggtttcaaccagttcacggagactaataaccggtgaagcagctaaaggaaccgtaaacttaaccgtgtc
+ggcaatatccccattctcaacacctaacccgctaatacctgttgcagctcgtaagtcattaatggacttttcaatcttag
+aaaaggttacatctttaggtatacttacctggacaacccctaaccgcaccccacagtcaatccgttcattgtataaccta
+gccgtatcaatcaattttacccgcttcataccttccgctagcttactaactattccttcatctagagtaccttgctctcg
+cttatacataggtaacagatcaaatgggtacgccttacgctccactacctcttctaatactttttccgttttctctactg
+taccacctaataaggagaatacttcgtttaagctaagtagttgatcttttgtgtaagctgctaatacacagtcagtatag
+ttagtaataaattgtttatctgacgacttaaccagtttcaactcgtttaaagccgtataagaccctagagcgtattgaat
+atactggatgatatcgtttaccctctcggacttaactgctattctgagctgaaattggaagcactcactctttatcttct
+cttctgctaacggttcgtaaggcttgtaatcctctggctgtattttgtttaacactcgaacagctttatcctgcagttta
+cgactccatctagaccaagaaggtttttcgttcccttgaatatagctatcgtacatatcaattgcgcgatcttgccaacc
+ataccgcctgcgtaataaccattgcgcatgtacctcttcatcaggatgtaaagccaagtccagtaaatcagtaaggaaga
+ggccgttcttatcctgtctgagagggagaaagaacgcttccgataaatacccctcgaagaaattaaaaccctctgtaggc
+gcttctcgatgtcttagaacaagttctgccccggtttcgatatgagagggtgcaatgacaaaagtattagccccctcacc
+ggttaaatgggtctctactccgaataccgaatcgttaatctgttcaaggatatcgacaaagtgaccttctatatcttcta
+caggcataaacaagttagctaggttatggtaatttgcagaaagctttttcatcttctctcccccttaatatgcttcataa
+ccattaaactgtttgcgatctgcatcccgctgctgaaaacaagcgaggtaagattaatgataattaatactgatactgta
+ctcatgttattcactccttattttctttttggtttaggcgtagacttacctggttttggtactggcgggtggaaacgttg
+catacgagtcttacctacccgctcaggagtttgtaatcgctcgtgtaccttctttacaacagtagtaggtttacggataa
+tgtccactgtatctcggaagttacgaactgttttagagactgtatctttagctggtgtatatactgagtcaaaccctgat
+ccattatctaagtgtttacttacaaattttggaggagagcttaactttgagaacccgccaatggtgaccagtagctttaa
+gataaatccagtgaagctcgcaggggtcggtgtgccgaacaatacccaaccgatcactagaagaaaaatagaatagtata
+cttgaacaagagacaagtgtttaacatttcccaaccatgtgttaaaataatttctatagctgtcaaatatccagcaggtg
+caggcgagaggacttactagcccgagcactaacaaatcaaagaaccggcgaccgtttttccacagc--------------
+--------------------------------------------------------------------------------
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+---------------------attggtacgattgttgagatgagcacgatatcgaataagac----aagggtagttactt
+cgaatgcactgatagtagaagggagacta--atattggtcatcgtcttagcacccatacccgagatcatatcggatactt
+tattcaacaattg--aaaacctttttgaaacacaatcggtaaaacagttgtgaatccagctaccacaaaccaccgtttca
+taatggtctgtaattccattggttgactatttctagtacctttcttgcgaagaccggaaatcatacgtttcatagcttcc
+aggatagtaaggacagatactaatccaatagataataagctaaacatataggtagtattttcgaaccattcattatcgaa
+taaccataaaggcgtcttcaatattaagtctgaacataactcatacagccatgccattaaatcaactgagccttgagcaa
+tgttgtgaggtaggttatgccaccattcctgtacactggtaatcatatcaccgatttgtcgcattacgtttggggcttct
+ttagcgttttcgattactttcttagtagaatgaatgtgtgctttcaaacctgtaggattatcaacaatagctgcgaacgc
+ttgggaggaatttgcggtgatgaaggttgaggatagtactgca-------------------------------------
+--------------------------------------------------------------------------------
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+-------------------------------------------aacgggacaacaagtaatcgagttaaagactgcctag
+agaaggtaaatttttgaatacgatttgagctaggtaaaacaagatacttaccaacggtacggctactaaggactgtacta
+aaccttttagaatg--tcgctgctccattggtcggctttttcgccctttctcatcattttgtagaaactggctacgatta
+acattatcatagagagacttacacttgcgcttact--ccga-gtaaagctagagatgacccccattttagcaccatactt
+ggagttattgtttgacttgctatatccgttccagcagctaaggctttgggagctacctgggcacttgccactaacactgc
+cataacccctcttagaatctgttttgtctttctggtttgtcgaggatgagacccttcttgaatttctttctgaagagcct
+ctagggtaaaaaccatatctttctccacatcatttactaatgaaacttctttcaccggctgaatataacgaacgccttct
+gttaaccctctagattgaatatttattttcatgttaatctctccttataagttagttgattttacttaatgtttgttccg
+ttattcttgcgcatttcagatatacgctgcctatgtgagtctccgtaaccgcctggagagtatgaagaaccttcagatcg
+tctctttttgctgaaatcgacctcgtaactgttaaaccattttagcgctgctactgccccactacctactgccatcatta
+agctaattccgcctgcgatagtaactaaacctgttgtaatcattataaatctccccttattatcagaatggtaaaactaa
+gttaataataaaacctaatgtgtctaatgaatattgaagaagtaaatctataaagttagtagtcatctcagatagccctt
+cgttaaatcgctgcattgtactattaaatatctctgcaccatctaatttgtcatatatgctacatccatcagttgaaggt
+atctcaacttgaggaatcctatcgttactagctaggtaaggctcggggtttacaaactggccttcctcattctttacccc
+aaagtggaggtggggcccggtacttctccctgtgtttcctgaaagagctaataaatctccctcattaatgtgttgcccaa
+cgtgaacttttgtattgtctgaaaggtgaccaaatatcaaatggttaccttgctcatctcgcataatcacccctttacct
+atattctgactgtggtaatcgacaattttttctatgactccattagctggagcctttatttcactgcctaaatccatcgc
+aagatcgagaccggtatggccgctagggtgtagtgcatctttagccccaaactgggttgttactcgataaagatcatttc
+cgtttaatctaacttgcattgtaaacaccccttagttaattttataaagttatagcttaggttattccttaaaagttttt
+tatttactttaaacaagccctatgatataatcttgttatagccaaatcataaataggaggagaaacaatggaagaaatgt
+ggaaaccgcttaaagatattgttgaaaacggtgacaactatgagataagcaacttaggtaaggtgcgaaatattaagaca
+ggtaggctgctatcccttaagtccggtcgcacaggttacgtttctgtaatgttatcactaaaagctaaaaataaaaccta
+tagagtacatcgtttagtgacactagcttttttacccaacccaacaagtaaaacccaggtgaaccacaaagatggggtaa
+aagacaataatgtgcttagtaatcttgagtgggccacccctctcgagaatattcaacatgcttctgagaccggcttacgt
+gatggaacaaaaggatctggtaactatcaagctaaactgacagaagatcaggtggtggatattaaacaaaggttaatggc
+cggagaaactattgtgtcactagcagagcgttataaagtgtcagtagccactatctcttacattcaccaaggtagggttt
+ggtctcaagtaaaggtaaaaggtttcaccgagatcaaaggaagagctgtgggtgaacgtgcttctacggcagtgttgacc
+gcaaagcaggttaaagagataaggagagtatattcgataggaattcttgattgtcgacaactttctgaaatgtttaacgt
+tagctttcaaactatatggaacgtagttaactacaaaacttggaaacatgttgagtaatcttcatgttcctttttttcgt
+ttaattttaccttaaaattgacccctatctagctatccaatgactccatattcctgcgtaatcctggtgctgatatacac
+cctttctttggctctaggagtgggtttgtagcgttggattatgtgatcctaaacggactacgggagcacaggactacggg
+agcacaggactacgtatttttactctattactggctcagctataaacagctccttaaaaatcatctaaccgagctttaat
+ttcctcgtccgctacttcttttttagttagttttatatctgaaaagtccaggttcctactttgtaataccggagaagttt
+cgacatttctaggtacaaactgggcagtagcaccacctgcccggaacttaatcccttcccttatcaatccccttactaca
+gaggagaagtcctccatctcgattaaaggttccaaatactcgataatatcctgatccttcttgtctcgtaggtacagtgt
+gcgacgaatagccatctcatctagcccctcttgctggtttcttagattttctaacaccgtacttgcgtagcccactaaca
+tttgaatagcgccctagaaactttacatttactttatcaagcgcatctctaaggtaaggttgcagtacttccgctccacc
+gccagtaaacacaatgttatccacaaaagcccaagagtctaataaaatcgtgtgtagcgtagagatgatgctatctgcgt
+gatcccggaacacccggtctacgataggtgaaatgtctcgacctcttatctccctgttcttaataatggaagggagttta
+ccattagggatagttgctttaaactcctgttctaagaatctgccaatctgaatataagatttaaacatgccttgattgtc
+ttggagagataatgattcctgctcctctagagcatctactgtgagaatattaagtgtacgggagccgatgtctaccagta
+cgttaaacccttttgctacctccatatcgatcatatccccattatggtctagaatgatgtcacataagcttccaaaaggc
+tgcttcttaatgtctaggttctcgatgtttactactttatcgaagaagtgaaccccgtctgtggaaattctaaaatcatg
+ggtacgtactactcgctggattaaatcgaaacgtctttcaggagtatcgaagtttagtggtaagttcatcataagcatat
+tgattacttctttattaccagagcacataagccctagggacgtttttaaaaggacatcgaagttatctgtattgtgttta
+tgatctgctgcgttccatctaatgtccggatcaagtttagtagcataatcgcctactacatagcgttgaccttctatctc
+tatggcaacatatttcaacttattgtcttttccgaagtcttctttaggcttaggtctgaatgaggtgacgaatgaaggga
+tatgttccggctctcctttactatcaaacttagtgtccccgtacccatcatctaaagcgtaagttgttaaagtatcctct
+tttttcatataaatcgctccttttgtgtgaggaagtatgagtgataattacttcctcagattttgtattactttctatac
+ttcatatatacggagaagttcacaaatattgcgtgtaccaataaaaaaaaattaaaaaaaaagaagaggactaaatccct
+cccctccttacatttccctataatagtaaactactgattgaccatcttcagataaccgttgcattaacacatatcgggta
+gtaggtatggtaagctccggagaaggctctgaaacccactctgtaggttttctagtatgggccgcttcgaacatttcacc
+tttcttatagcggcattcctcacaagcacactttatatcatggagaatcggagtcgttgattccccaatactacgtctct
+gctccctgaacgcagtaaagatgaaatcaaaaccgttcgtacccattagagatagataacgattaattacttccttcata
+cttaggcgacttgagtagtgtttactatcgttcaactcttctacactaatgtcatgtatagcagcaacatcgatcatttg
+ctgtcttaacctatctgcgtgacgactagcaagcgatttatccgctgggtgtcttataataactgagtccggatcattag
+gtgatgggtgactgctacgtaagtttttatcgaacatttccgtgttaaactggtaccagagccataaacggtcaatcatg
+tctcgcttcttagcttcatagtgcatacctagataatggttttcaaacttcattgaactccaccccaatctcttgtatgc
+gcaattgtatttccttttgtaatcgactcaatacgctccatagggatcagaacaacaaagtcagtattaacaaaccgctc
+tgttgatcctttcgctgctttacctctattatacttagaaagttcgatgtagctgaaatacactctaacatggccatgcg
+gatcggccattgacttgatattgtgtcgagggtcttctttacactttttcgtatagtctgctacaatctgttggattcgt
+tcaacgatattactcattggctatactcctggtaactaatctcaatcttttcgcctgtaacaggttcttttgtgtctttg
+taacaaagcattttccaaaaggaggagaaggatatatgcatcccatccccctgttcacctctacccgtcatccagaaagt
+ttctctcattattcttcatcctcctcataattatctaatgtccattcgaatcctacagctttcattagcatattcatggt
+tgtaacaccaggaataacatctcccgcaaagatagctgctacggtgtcgtaaggtaaacctgatttatcggctagctggt
+ctcttgttaagcctaatcgatcctggcgagccattatacgtcctagcgagtccaagacaaatttctggtaagggtctacc
+tcgtgtaattccttttgtacgtctgcgaatgttttaatcttagtcattgcttttctcctcttctggtatttccatgtctt
+taatgaagtcttcaacaagtacgtgaaacttaaagtatttctcatggacaactgttatcgcttcttgtatagctatatcc
+atctccttcgggatatctacggagtttttccgctcggagttgtaccaggaggtcattgcgagatactttctacgtagttc
+gtctctttctcttatggcatcggtcagtctcatttctttttctcct----------------------------------
+--------------------------------------------------------------------------------
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+---------------------------------------------cttttttcttagt--gaccgagggctttttaccct
+cggatggtttactttcactgagtct--agatgttaaatatttatgta---gtttaccagtgaatga-ccccattatacat
+caccgccttagtgtaagacaagcctt--atttacttttagtca------cggaaaacgaagtagccaataccaagaccga
+tcattacgtggtaaaaatcattccaatatgcagctgctctagggaagtttaactcacctaaaatcgcccagatcatcgaa
+ccaacaaatgaagatacaactaaccagattattagtttaccataactcatgcgtgttcccctcctcagtcaataataacg
+tatattttctttaactctttttctagttctacttcccaggatcgtaactcacttctaagtgcgtataatgccacggttgg
+gaggttatttcgttcttcgactaaacgtaccccctcctttaggcctgctatgccctgtcgtatggaacttatggagctac
+acacctgaatacctgttgttagcctcttttcgaaatttgcaagagacaagtcaccttcccagtgaattactcgggaagca
+catacagcctggtaattttcctctgcttccttctctgctttcgcatcatttccttggtagttgcctcgcatactacgcca
+aaactctatacgatcgtgtagctggtgccctgtaatttgctcaagattcactcacttacacctccttaaaggtaacttta
+gcaaaattgtctaattcttctactgcagaaacgtgagccccttttataagctcgtaggctaggctatcaaaacctagttt
+ggattctgcctccaccgatgctttctccgttatatgcactctgttctctaattcctcatatgttttaactatctgcccta
+cagtcattgtacgttgcctcatattaactctcctccatttcttcttcttcttgtaaaataattcggtacttttcacgagt
+aagacgctcaatatatgcttcgacatcggatatataagcctctagtagcggtggcgttttattttcgatgcaaccaccat
+acctgtacttatgctcaacctctcgtaacgtagccaaatcgtcttgagccatttcgagtgccttctctatacccttcttg
+cctagcgcttgtatagcttctctgcttgccttagtatcatatttacggataatagcctcaagcacaccaatatggtgctg
+taatgttgctatctgcttcttcaactcgtatattgtttgtgaagcgcttttctctttttctgctttcgcatcatttcctt
+ggtagttgcctcgcatactacgccaaaactctatacgatcgtgtagctggtgccctgtaatttgctcaaaattcattcgt
+ctaccccccgaaacaataacatattttttccgcttctctttttctgctttgttatctctactattgaacataattaattc
+tcctcctttgtcggtgtaaacctcactaacgcataatccgcagcacatagtccatttaactcttgttctagtcgagatag
+ctccctgtttaacgtttgtgtagctgcattgatttgaggtagtctagtattagctatagcatctttaccctctaatagtt
+gttctttcttcttataggctgagtaaatgctaaagtagatgtcataagcgtttcggtcaggtacacctagaactaagcta
+cctcctggtttatcagctaaatgatacacatgtgcctctgctgcctccttaactttcattagcttatctcgttcctctag
+gagcacctgcgatccttttgataatcctcctcgtttctctactacatacattcttgccacttcaatttccttaatatcct
+ccatcgtatgacgtagtgcctgataaatttcaatacctgttgtcagtttttcgaatttcatattatttgtcctcctctaa
+tttagctattcttttttcaaggctcgctatacacttagcttgctcgctcattaaagccataacatcgtcaaatgtatctg
+ttaatttatcaagtatgatagtcatttttaacatgttaaactctgttgtcggttccatattagttatcctcctaggggac
+tacttagtttaagcatcccgtatagtgtaaatattcctgttaaaggtagtaaagggtcgagggccggagccttaaaaggg
+ttatgttcctcgactggttgggttgttacactcggctcctggactttcttttgtacaacgggttctttatatgtaggttg
+ttgctctaaggtggcgatccgctgctctaactcgatggtgttggtatggtaagctttcctggtagcatccatttggagtg
+ctagtctattgatctggtaatcttggtacttttgatgttgcataagataagcgtacttccctgcaatcatatttgctgta
+acaaagagtaacaatattagtaagagtatgagaagacgcttaaaccattttcgcttagttggtttgcgtttcttctgcat
+aaggtttacttctcctttctgcggtgactggccatgtaacctagtgtataagcgcctagaaaagtaatcataagctgtgt
+aataactgacgtatgttggtcggccactaagccatctgtgacccctactgcagcagccgtcaataaaataataccagcgt
+cgattaaaaagtttttcatttaattttcctccttctctgaatctatctttattgtacaagcttatatactaaaagtcaat
+acttatttaaaaaaaaatctgagggagtttttagctccctacattgatccggaaattaactgcatcgatgtcgatatgtg
+atagtacagtctttaactcgtctaacttcgcaataacctcctccttagaaaccatttgaccagacacgttaaaattaaag
+ttatactctactttagctttactctctttaactaattctggttcgtcccattgctctctatttaggctattggctagtgc
+agccatctcttcttttgaaaacttatttttctcgtccattttgttcacgtagttcatcatcccttctgcttgtactctta
+tcatatgtgtagctaactgtttaccttgctcctccattcgttgcatagccggagacaactcagcgttacctaacacgtat
+atatcttttggtggagtcggtgttgcaataggctgtaacggtaccttcttagctaccggaacactaataggtggcgtagc
+ctgtacaggagtagcttgagtaggtgctggtttctttttcatcgtctccttatttttaggcttcttattacctttacgag
+gtgcattattcgctctatttttattcttaactgctttagaacgatacttactagctaagtaacctatagtactcaatgga
+acctctgtacgagttgcaatctccttgtacgttagctctgtagactccaataaacgaatcgcttcctcacggtttccttt
+tggatttttattataacccacagtatccatctcctcttctttttgttttttaactttacccacagcaacaaccatctttt
+taactttaggttctggtttaactactacctgttcctcttcgttaaacccttctttcatactagctaagattttcttctct
+aacctagagatttgaacttgggatacgcccaattcatctgctgtctcactttgggttctatcttgaaaatatctaagttg
+tacaatctgctgctctcgctcgtctaacttctcaatagcttggcgaagtgcgatattatttaaccaattagcaccgttta
+cgtcaccagccatttgatcccctacagtaatagggtcgccatcattctcgtatactgtttcgtcggtagatattgcctgc
+ccacctttctctttgagataccgtagcgcactatttacatacccaactgttgtactctctagtccaagtttttcaataat
+gatttcaggcgattctttatatagattttccctagcaatcctgttggctagttctttgagtgtgcgaggtaccttaactg
+taccatcgtctcgaatgaaccgttgtatttctcctataatcataggtacagcgtaggtagaaaactgtacatcatagtta
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+cgttc-tcgatcgccgacaccatcctcaa---------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------gcccctggtcgtcgaccagaccggcggaccgggtttc
+caggcggcgggcgcggcgctccagggcctgaacatcactccgccgggcggcggcggcttcctgtcgggcctgggctcgat
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+gcatc----cagggacacctcctttcatggttaatgcccgatgccgagct-tccacgac---------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
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+----------------------------------------------gtcctgttccccgagactatcagctacggctcgt
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+=
+> 1:1-83042 + dataset_662722.dat
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+=
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+=
+> 2:1-61895 + dataset_662722.dat
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+=
+> 2:118871-221828 + dataset_662722.dat
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+=