Mercurial > repos > cpt > cpt_psm_recombine
annotate lib/CPT/Parameter/Int.pm @ 1:97ef96676b48 draft
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
| author | cpt | 
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| date | Mon, 05 Jun 2023 02:51:26 +0000 | 
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| rev | line source | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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1 package CPT::Parameter::Int; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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2 use Scalar::Util qw(looks_like_number); | 
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3 use Moose; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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4 with 'CPT::Parameter'; | 
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5 | 
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6 has 'min' => ( is => 'rw', isa => 'Int' ); | 
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7 has 'max' => ( is => 'rw', isa => 'Int' ); | 
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8 | 
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9 | 
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10 | 
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11 sub galaxy_input { | 
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12 my ( $self, $xml_writer ) = @_; | 
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13 $self->handle_possible_galaxy_input_repeat_start($xml_writer); | 
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14 my %params = $self->get_default_input_parameters('integer'); | 
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15 | 
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16 if(defined $self->min()){ | 
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17 $params{min} = $self->min(); | 
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18 } | 
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19 if(defined $self->max()){ | 
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20 $params{max} = $self->max(); | 
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21 } | 
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22 $xml_writer->startTag( | 
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23 'param', | 
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24 %params, | 
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25 ); | 
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26 $xml_writer->endTag('param'); | 
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27 $self->handle_possible_galaxy_input_repeat_end($xml_writer); | 
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28 } | 
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29 | 
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30 | 
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31 sub galaxy_output { | 
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32 | 
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33 } | 
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34 | 
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35 sub validate_individual { | 
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36 my ($self, $value) = @_; | 
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37 if ( looks_like_number( $value ) ) { | 
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38 # Check bounds | 
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39 if ( defined $self->max() && $value > $self->max() ) { | 
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40 push(@{$self->errors()}, sprintf( "Value passed with %s was greater than the allowable upper bound. [%s > %s]", $self->name(), $value, $self->max() )); | 
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41 return 0; | 
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42 } | 
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43 if ( defined $self->min() && $value < $self->min() ) { | 
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44 push(@{$self->errors()}, sprintf( "Value passed with %s was smaller than the allowable minimum bound. [%s < %s]", $self->name(), $value, $self->min() )); | 
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45 return 0; | 
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46 } | 
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47 return 1; | 
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48 } | 
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49 else { | 
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50 push(@{$self->errors()}, sprintf( "Value passed with %s does not look like a float [%s]", $self->name(), $value )); | 
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51 return 0; | 
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52 } | 
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53 } | 
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54 | 
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55 | 
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56 sub getopt_format { | 
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57 return '=i'; | 
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58 } | 
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59 | 
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60 no Moose; | 
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61 1; | 
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62 | 
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63 __END__ | 
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64 | 
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65 =pod | 
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66 | 
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67 =encoding UTF-8 | 
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68 | 
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69 =head1 NAME | 
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70 | 
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71 CPT::Parameter::Int | 
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72 | 
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73 =head1 VERSION | 
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74 | 
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75 version 1.99.4 | 
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76 | 
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77 =head2 galaxy_input | 
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78 | 
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79 $file_param->galaxy_input($xml_writer); # where $file_param is a CPT::Parameter::* | 
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80 | 
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81 Utilises the $xml_writer to add a <data> block in the <output> section | 
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82 | 
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83 =head2 galaxy_output | 
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84 | 
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85 $file_param->galaxy_output($xml_writer); # where $file_param is a CPT::Parameter::* | 
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86 | 
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87 Utilises the $xml_writer to add a <data> block in the <output> section | 
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88 | 
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89 =head2 getopt_format | 
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90 | 
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91 Returns the format character for a given CPT::Parameter::* type | 
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92 | 
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93 =head1 AUTHOR | 
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94 | 
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95 Eric Rasche <rasche.eric@yandex.ru> | 
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96 | 
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97 =head1 COPYRIGHT AND LICENSE | 
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98 | 
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99 This software is Copyright (c) 2014 by Eric Rasche. | 
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100 | 
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101 This is free software, licensed under: | 
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102 | 
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103 The GNU General Public License, Version 3, June 2007 | 
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104 | 
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105 =cut | 
