annotate cpt_rem_annotes/test-data/RemoveAnnote_In.gff3 @ 2:49f50c55a9f8 draft default tip

Uploaded
author cpt
date Fri, 20 May 2022 09:00:53 +0000
parents 03d27abd1dfd
children
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0
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cpt
parents:
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1 ##gff-version 3
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cpt
parents:
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2 ##sequence-region Pipo 1 41839
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cpt
parents:
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3 Pipo annotation remark 1 41839 . . . gff-version=3;sequence-region=%28%27NODE_1_length_42045_cov_96%27%2C 0%2C 41956%29
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cpt
parents:
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4 Pipo GenBank gene 258 566 . + 1 ID=CPT_Pipo_001;Name=CPT_Pipo_001
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cpt
parents:
diff changeset
5 Pipo GenBank mRNA 273 566 . + 1 ID=CPT_Pipo_001.t01;Parent=CPT_Pipo_001
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
6 Pipo GenBank CDS 273 566 . + 1 ID=CPT_Pipo_001.p01;Name=CPT_Pipo_001;Note=detected two transmembrane domains,8782901 HHPR;Parent=CPT_Pipo_001.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
7 Pipo GenBank exon 273 566 . + 1 Parent=CPT_Pipo_001.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
8 Pipo GenBank RBS 258 261 . + 1 Name=CPT_Pipo_001;Parent=CPT_Pipo_001
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
9 Pipo GenBank gene 841 1031 . + 1 ID=CPT_Pipo_002;Name=CPT_Pipo_002
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
10 Pipo GenBank mRNA 852 1031 . + 1 ID=CPT_Pipo_002.t01;Parent=CPT_Pipo_002
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
11 Pipo GenBank CDS 852 1031 . + 1 ID=CPT_Pipo_002.p01;Name=CPT_Pipo_002;Note=4.9466e-34 %5BAcinetobacter phage vB_ApiP_P1%5D;Parent=CPT_Pipo_002.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
12 Pipo GenBank exon 852 1031 . + 1 Parent=CPT_Pipo_002.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
13 Pipo GenBank RBS 841 844 . + 1 Name=CPT_Pipo_002;Parent=CPT_Pipo_002
03d27abd1dfd Uploaded
cpt
parents:
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14 Pipo GenBank gene 1090 1303 . + 1 ID=CPT_Pipo_003;Name=CPT_Pipo_003
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cpt
parents:
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15 Pipo GenBank mRNA 1100 1303 . + 1 ID=CPT_Pipo_003.t01;Parent=CPT_Pipo_003
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
16 Pipo GenBank CDS 1100 1303 . + 1 ID=CPT_Pipo_003.p01;Name=CPT_Pipo_003;Note=1.1538e-41%5BAcinetobacter phage vB_AbaP_B09_Aci08%5D;Parent=CPT_Pipo_003.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
17 Pipo GenBank exon 1100 1303 . + 1 Parent=CPT_Pipo_003.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
18 Pipo GenBank RBS 1090 1092 . + 1 Name=CPT_Pipo_003;Parent=CPT_Pipo_003
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
19 Pipo GenBank gene 1732 1992 . + 1 ID=CPT_Pipo_004;Name=CPT_Pipo_004
03d27abd1dfd Uploaded
cpt
parents:
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20 Pipo GenBank mRNA 1744 1992 . + 1 ID=CPT_Pipo_004.t01;Parent=CPT_Pipo_004
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
21 Pipo GenBank CDS 1744 1992 . + 1 ID=CPT_Pipo_004.p01;Name=CPT_Pipo_004;Note=8.14463e-44 %5BAcinetobacter phage vB_AbaP_46-62_Aci07%5D;Parent=CPT_Pipo_004.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
22 Pipo GenBank exon 1744 1992 . + 1 Parent=CPT_Pipo_004.t01
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cpt
parents:
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23 Pipo GenBank RBS 1732 1736 . + 1 Name=CPT_Pipo_004;Parent=CPT_Pipo_004
03d27abd1dfd Uploaded
cpt
parents:
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24 Pipo GenBank gene 2008 2572 . + 1 ID=CPT_Pipo_005;Name=CPT_Pipo_005
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cpt
parents:
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25 Pipo GenBank mRNA 2021 2572 . + 1 ID=CPT_Pipo_005.t01;Parent=CPT_Pipo_005
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cpt
parents:
diff changeset
26 Pipo GenBank CDS 2021 2572 . + 1 ID=CPT_Pipo_005.p01;Name=CPT_Pipo_005;Note=3.57359e-23 phiKMV NP_877442.1;Parent=CPT_Pipo_005.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
27 Pipo GenBank exon 2021 2572 . + 1 Parent=CPT_Pipo_005.t01
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cpt
parents:
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28 Pipo GenBank RBS 2008 2010 . + 1 Name=CPT_Pipo_005;Parent=CPT_Pipo_005
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cpt
parents:
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29 Pipo GenBank gene 2564 2948 . + 1 ID=CPT_Pipo_006;Name=CPT_Pipo_006
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cpt
parents:
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30 Pipo GenBank mRNA 2574 2948 . + 1 ID=CPT_Pipo_006.t01;Parent=CPT_Pipo_006
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cpt
parents:
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31 Pipo GenBank CDS 2574 2948 . + 1 ID=CPT_Pipo_006.p01;Name=CPT_Pipo_006;Note=1.39987e-77 %5BAcinetobacter phage IME200%5D,detected coil fragment;Parent=CPT_Pipo_006.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
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32 Pipo GenBank exon 2574 2948 . + 1 Parent=CPT_Pipo_006.t01
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cpt
parents:
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33 Pipo GenBank RBS 2564 2567 . + 1 Name=CPT_Pipo_006;Parent=CPT_Pipo_006
03d27abd1dfd Uploaded
cpt
parents:
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34 Pipo GenBank gene 2930 3052 . + 1 ID=CPT_Pipo_007;Name=CPT_Pipo_007
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cpt
parents:
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35 Pipo GenBank mRNA 2939 3052 . + 1 ID=CPT_Pipo_007.t01;Parent=CPT_Pipo_007
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cpt
parents:
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36 Pipo GenBank CDS 2939 3052 . + 1 ID=CPT_Pipo_007.p01;Name=CPT_Pipo_007;Parent=CPT_Pipo_007.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
37 Pipo GenBank exon 2939 3052 . + 1 Parent=CPT_Pipo_007.t01
03d27abd1dfd Uploaded
cpt
parents:
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38 Pipo GenBank RBS 2930 2933 . + 1 Name=CPT_Pipo_007;Parent=CPT_Pipo_007
03d27abd1dfd Uploaded
cpt
parents:
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39 Pipo GenBank gene 3027 3263 . + 1 ID=CPT_Pipo_008;Name=CPT_Pipo_008
03d27abd1dfd Uploaded
cpt
parents:
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40 Pipo GenBank mRNA 3039 3263 . + 1 ID=CPT_Pipo_008.t01;Parent=CPT_Pipo_008
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
41 Pipo GenBank CDS 3039 3263 . + 1 ID=CPT_Pipo_008.p01;Name=CPT_Pipo_008;Note=2.88488e-44 %5BAcinetobacter phage Fri1%5D;Parent=CPT_Pipo_008.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
42 Pipo GenBank exon 3039 3263 . + 1 Parent=CPT_Pipo_008.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
43 Pipo GenBank RBS 3027 3030 . + 1 Name=CPT_Pipo_008;Parent=CPT_Pipo_008
03d27abd1dfd Uploaded
cpt
parents:
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44 Pipo GenBank gene 3336 3944 . + 1 ID=CPT_Pipo_009;Name=CPT_Pipo_009
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cpt
parents:
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45 Pipo GenBank mRNA 3348 3944 . + 1 ID=CPT_Pipo_009.t01;Parent=CPT_Pipo_009
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cpt
parents:
diff changeset
46 Pipo GenBank CDS 3348 3944 . + 1 ID=CPT_Pipo_009.p01;Name=CPT_Pipo_009;Note=2.06752e-145 %5BAcinetobacter phage vB_AbaP_B1%5D;Parent=CPT_Pipo_009.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
47 Pipo GenBank exon 3348 3944 . + 1 Parent=CPT_Pipo_009.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
48 Pipo GenBank RBS 3336 3339 . + 1 Name=CPT_Pipo_009;Parent=CPT_Pipo_009
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
49 Pipo GenBank gene 4047 4550 . + 1 ID=CPT_Pipo_010;Name=CPT_Pipo_010
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
50 Pipo GenBank mRNA 4059 4550 . + 1 ID=CPT_Pipo_010.t01;Parent=CPT_Pipo_010
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
51 Pipo GenBank CDS 4059 4550 . + 1 ID=CPT_Pipo_010.p01;Name=CPT_Pipo_010;Note=putative DNA-binding protein;Parent=CPT_Pipo_010.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
52 Pipo GenBank exon 4059 4550 . + 1 Parent=CPT_Pipo_010.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
53 Pipo GenBank RBS 4047 4050 . + 1 Name=CPT_Pipo_010;Parent=CPT_Pipo_010
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
54 Pipo GenBank gene 4635 4779 . + 1 ID=CPT_Pipo_011;Name=CPT_Pipo_011
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cpt
parents:
diff changeset
55 Pipo GenBank mRNA 4645 4779 . + 1 ID=CPT_Pipo_011.t01;Parent=CPT_Pipo_011
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cpt
parents:
diff changeset
56 Pipo GenBank CDS 4645 4779 . + 1 ID=CPT_Pipo_011.p01;Name=CPT_Pipo_011;Note=3.48784e-16 %5BAcinetobacter phage Abp1%5D;Parent=CPT_Pipo_011.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
57 Pipo GenBank exon 4645 4779 . + 1 Parent=CPT_Pipo_011.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
58 Pipo GenBank RBS 4635 4638 . + 1 Name=CPT_Pipo_011;Parent=CPT_Pipo_011
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cpt
parents:
diff changeset
59 Pipo GenBank gene 4757 4930 . + 1 ID=CPT_Pipo_012;Name=CPT_Pipo_012
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cpt
parents:
diff changeset
60 Pipo GenBank mRNA 4772 4930 . + 1 ID=CPT_Pipo_012.t01;Parent=CPT_Pipo_012
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cpt
parents:
diff changeset
61 Pipo GenBank CDS 4772 4930 . + 1 ID=CPT_Pipo_012.p01;Name=CPT_Pipo_012;Note=1.10076e-24 %5BAcinetobacter phage vB_AbaP_D2%5D,putative membrane protein;Parent=CPT_Pipo_012.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
62 Pipo GenBank exon 4772 4930 . + 1 Parent=CPT_Pipo_012.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
63 Pipo GenBank RBS 4757 4760 . + 1 Name=CPT_Pipo_012;Parent=CPT_Pipo_012
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
64 Pipo GenBank gene 4929 5337 . + 1 ID=CPT_Pipo_013;Name=CPT_Pipo_013
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
65 Pipo GenBank mRNA 4939 5337 . + 1 ID=CPT_Pipo_013.t01;Parent=CPT_Pipo_013
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cpt
parents:
diff changeset
66 Pipo GenBank CDS 4939 5337 . + 1 ID=CPT_Pipo_013.p01;Name=CPT_Pipo_013;Note=5.08591e-94 %5BAcinetobacter phage vB_ApiP_P2 %5D;Parent=CPT_Pipo_013.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
67 Pipo GenBank exon 4939 5337 . + 1 Parent=CPT_Pipo_013.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
68 Pipo GenBank RBS 4929 4932 . + 1 Name=CPT_Pipo_013;Parent=CPT_Pipo_013
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
69 Pipo GenBank gene 5396 5887 . + 1 ID=CPT_Pipo_014;Name=CPT_Pipo_014
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
70 Pipo GenBank mRNA 5408 5887 . + 1 ID=CPT_Pipo_014.t01;Parent=CPT_Pipo_014
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
71 Pipo GenBank CDS 5408 5887 . + 1 ID=CPT_Pipo_014.p01;Name=CPT_Pipo_014;Note=8.66443e-113 Acinetobacter phage phiAB6;Parent=CPT_Pipo_014.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
72 Pipo GenBank exon 5408 5887 . + 1 Parent=CPT_Pipo_014.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
73 Pipo GenBank RBS 5396 5400 . + 1 Name=CPT_Pipo_014;Parent=CPT_Pipo_014
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
74 Pipo GenBank gene 5875 6194 . + 1 ID=CPT_Pipo_015;Name=CPT_Pipo_015
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
75 Pipo GenBank mRNA 5889 6194 . + 1 ID=CPT_Pipo_015.t01;Parent=CPT_Pipo_015
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
76 Pipo GenBank CDS 5889 6194 . + 1 ID=CPT_Pipo_015.p01;Name=CPT_Pipo_015;Note=2.41773e-33 Acinetobacter phage vB_AbaP_B1;Parent=CPT_Pipo_015.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
77 Pipo GenBank exon 5889 6194 . + 1 Parent=CPT_Pipo_015.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
78 Pipo GenBank RBS 5875 5879 . + 1 Name=CPT_Pipo_015;Parent=CPT_Pipo_015
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
79 Pipo GenBank gene 6221 6340 . + 1 ID=CPT_Pipo_016;Name=CPT_Pipo_016
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
80 Pipo GenBank mRNA 6221 6340 . + 1 ID=CPT_Pipo_016.t01;Parent=CPT_Pipo_016
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
81 Pipo GenBank CDS 6221 6340 . + 1 ID=CPT_Pipo_016.p01;Name=CPT_Pipo_016;Parent=CPT_Pipo_016.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
82 Pipo GenBank exon 6221 6340 . + 1 Parent=CPT_Pipo_016.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
83 Pipo GenBank gene 6342 6518 . + 1 ID=CPT_Pipo_017;Name=CPT_Pipo_017
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
84 Pipo GenBank mRNA 6351 6518 . + 1 ID=CPT_Pipo_017.t01;Parent=CPT_Pipo_017
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
85 Pipo GenBank CDS 6351 6518 . + 1 ID=CPT_Pipo_017.p01;Name=CPT_Pipo_017;Note=detected coil fragment,9.9476e-30 Acinetobacter phage vB_AbaP_B5;Parent=CPT_Pipo_017.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
86 Pipo GenBank exon 6351 6518 . + 1 Parent=CPT_Pipo_017.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
87 Pipo GenBank RBS 6342 6345 . + 1 Name=CPT_Pipo_017;Parent=CPT_Pipo_017
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
88 Pipo GenBank gene 6492 6696 . + 1 ID=CPT_Pipo_018;Name=CPT_Pipo_018
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
89 Pipo GenBank mRNA 6505 6696 . + 1 ID=CPT_Pipo_018.t01;Parent=CPT_Pipo_018
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
90 Pipo GenBank CDS 6505 6696 . + 1 ID=CPT_Pipo_018.p01;Name=CPT_Pipo_018;Note=4.55802e-26 Acinetobacter phage vB_AbaP_B09_Aci08;Parent=CPT_Pipo_018.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
91 Pipo GenBank exon 6505 6696 . + 1 Parent=CPT_Pipo_018.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
92 Pipo GenBank RBS 6492 6495 . + 1 Name=CPT_Pipo_018;Parent=CPT_Pipo_018
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
93 Pipo GenBank gene 6683 6923 . + 1 ID=CPT_Pipo_019;Name=CPT_Pipo_019
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
94 Pipo GenBank mRNA 6693 6923 . + 1 ID=CPT_Pipo_019.t01;Parent=CPT_Pipo_019
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
95 Pipo GenBank CDS 6693 6923 . + 1 ID=CPT_Pipo_019.p01;Name=CPT_Pipo_019;Note=8.95155e-34 %5BAcinetobacter phage vB_AbaP_B5%5D;Parent=CPT_Pipo_019.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
96 Pipo GenBank exon 6693 6923 . + 1 Parent=CPT_Pipo_019.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
97 Pipo GenBank RBS 6683 6686 . + 1 Name=CPT_Pipo_019;Parent=CPT_Pipo_019
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
98 Pipo GenBank gene 6899 7137 . + 1 ID=CPT_Pipo_020;Name=CPT_Pipo_020
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
99 Pipo GenBank mRNA 6913 7137 . + 1 ID=CPT_Pipo_020.t01;Parent=CPT_Pipo_020
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
100 Pipo GenBank CDS 6913 7137 . + 1 ID=CPT_Pipo_020.p01;Name=CPT_Pipo_020;Note=2.54819e-39 %5BAcinetobacter phage IME200%5D;Parent=CPT_Pipo_020.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
101 Pipo GenBank exon 6913 7137 . + 1 Parent=CPT_Pipo_020.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
102 Pipo GenBank RBS 6899 6903 . + 1 Name=CPT_Pipo_020;Parent=CPT_Pipo_020
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
103 Pipo GenBank gene 7150 7609 . + 1 ID=CPT_Pipo_021;Name=CPT_Pipo_021
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
104 Pipo GenBank mRNA 7160 7609 . + 1 ID=CPT_Pipo_021.t01;Parent=CPT_Pipo_021
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
105 Pipo GenBank CDS 7160 7609 . + 1 ID=CPT_Pipo_021.p01;Name=CPT_Pipo_021;Note=IPR003615 potential putative HNH endonuclease,%5B1.0895e-17 Blast to T7 NP_041994.1%5Dand %5B0.00047196 blast to phage K YP_009041447.1%5D;Parent=CPT_Pipo_021.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
106 Pipo GenBank exon 7160 7609 . + 1 Parent=CPT_Pipo_021.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
107 Pipo GenBank RBS 7150 7154 . + 1 Name=CPT_Pipo_021;Parent=CPT_Pipo_021
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
108 Pipo GenBank gene 7672 8394 . + 1 ID=CPT_Pipo_022;Name=CPT_Pipo_022
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
109 Pipo GenBank mRNA 7687 8394 . + 1 ID=CPT_Pipo_022.t01;Parent=CPT_Pipo_022
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
110 Pipo GenBank CDS 7687 8394 . + 1 ID=CPT_Pipo_022.p01;Name=CPT_Pipo_022;Note=NP_877453.1 potential putative DNA-like primase,1.71113e-21;Parent=CPT_Pipo_022.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
111 Pipo GenBank exon 7687 8394 . + 1 Parent=CPT_Pipo_022.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
112 Pipo GenBank RBS 7672 7674 . + 1 Name=CPT_Pipo_022;Parent=CPT_Pipo_022
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
113 Pipo GenBank gene 8383 8705 . + 1 ID=CPT_Pipo_023;Name=CPT_Pipo_023
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
114 Pipo GenBank mRNA 8394 8705 . + 1 ID=CPT_Pipo_023.t01;Parent=CPT_Pipo_023
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
115 Pipo GenBank CDS 8394 8705 . + 1 ID=CPT_Pipo_023.p01;Name=CPT_Pipo_023;Note=3.11975e-49 %5BAcinetobacter phage vB_AbaP_B09_Aci08 %5D;Parent=CPT_Pipo_023.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
116 Pipo GenBank exon 8394 8705 . + 1 Parent=CPT_Pipo_023.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
117 Pipo GenBank RBS 8383 8386 . + 1 Name=CPT_Pipo_023;Parent=CPT_Pipo_023
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
118 Pipo GenBank gene 8778 10086 . + 1 ID=CPT_Pipo_024;Name=CPT_Pipo_024
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
119 Pipo GenBank mRNA 8788 10086 . + 1 ID=CPT_Pipo_024.t01;Parent=CPT_Pipo_024
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
120 Pipo GenBank CDS 8788 10086 . + 1 ID=CPT_Pipo_024.p01;Name=CPT_Pipo_024;Note=3.12672e-62,NP_877454.1 %5BphiKMVp15%5D;Parent=CPT_Pipo_024.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
121 Pipo GenBank exon 8788 10086 . + 1 Parent=CPT_Pipo_024.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
122 Pipo GenBank RBS 8778 8781 . + 1 Name=CPT_Pipo_024;Parent=CPT_Pipo_024
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
123 Pipo GenBank gene 10079 10826 . + 1 ID=CPT_Pipo_025;Name=CPT_Pipo_025
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
124 Pipo GenBank mRNA 10089 10826 . + 1 ID=CPT_Pipo_025.t01;Parent=CPT_Pipo_025
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
125 Pipo GenBank CDS 10089 10826 . + 1 ID=CPT_Pipo_025.p01;Name=CPT_Pipo_025;Parent=CPT_Pipo_025.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
126 Pipo GenBank exon 10089 10826 . + 1 Parent=CPT_Pipo_025.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
127 Pipo GenBank RBS 10079 10081 . + 1 Name=CPT_Pipo_025;Parent=CPT_Pipo_025
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
128 Pipo GenBank gene 10809 11794 . + 1 ID=CPT_Pipo_026;Name=CPT_Pipo_026
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
129 Pipo GenBank mRNA 10823 11794 . + 1 ID=CPT_Pipo_026.t01;Parent=CPT_Pipo_026
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
130 Pipo GenBank CDS 10823 11794 . + 1 ID=CPT_Pipo_026.p01;Name=CPT_Pipo_026;Note=2.84662e-63 NP_853585.1 PMID: 15028677,IPR012310;Parent=CPT_Pipo_026.t01;product=DNA ligase
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
131 Pipo GenBank exon 10823 11794 . + 1 Parent=CPT_Pipo_026.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
132 Pipo GenBank RBS 10809 10813 . + 1 Name=CPT_Pipo_026;Parent=CPT_Pipo_026
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
133 Pipo GenBank gene 11755 11870 . + 1 ID=CPT_Pipo_027;Name=CPT_Pipo_027
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
134 Pipo GenBank mRNA 11766 11870 . + 1 ID=CPT_Pipo_027.t01;Parent=CPT_Pipo_027
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
135 Pipo GenBank CDS 11766 11870 . + 1 ID=CPT_Pipo_027.p01;Name=CPT_Pipo_027;Note=YP_009288649.1;Parent=CPT_Pipo_027.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
136 Pipo GenBank exon 11766 11870 . + 1 Parent=CPT_Pipo_027.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
137 Pipo GenBank RBS 11755 11757 . + 1 Name=CPT_Pipo_027;Parent=CPT_Pipo_027
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
138 Pipo GenBank gene 11927 12041 . + 1 ID=CPT_Pipo_028;Name=CPT_Pipo_028
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
139 Pipo GenBank mRNA 11940 12041 . + 1 ID=CPT_Pipo_028.t01;Parent=CPT_Pipo_028
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
140 Pipo GenBank CDS 11940 12041 . + 1 ID=CPT_Pipo_028.p01;Name=CPT_Pipo_028;Note=blastp 6e-09 %5BAcinetobacter phage ABPK48-2%5D;Parent=CPT_Pipo_028.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
141 Pipo GenBank exon 11940 12041 . + 1 Parent=CPT_Pipo_028.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
142 Pipo GenBank RBS 11927 11931 . + 1 Name=CPT_Pipo_028;Parent=CPT_Pipo_028
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
143 Pipo GenBank gene 12045 12500 . + 1 ID=CPT_Pipo_029;Name=CPT_Pipo_029
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
144 Pipo GenBank mRNA 12054 12500 . + 1 ID=CPT_Pipo_029.t01;Parent=CPT_Pipo_029
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
145 Pipo GenBank CDS 12054 12500 . + 1 ID=CPT_Pipo_029.p01;Name=CPT_Pipo_029;Note=0.000330846 %5BphageK_gp041%5D YP_009041447.1,IPR003615;Parent=CPT_Pipo_029.t01;product=putative HNH endonuclease
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
146 Pipo GenBank exon 12054 12500 . + 1 Parent=CPT_Pipo_029.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
147 Pipo GenBank RBS 12045 12048 . + 1 Name=CPT_Pipo_029;Parent=CPT_Pipo_029
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
148 Pipo GenBank gene 12485 14815 . + 1 ID=CPT_Pipo_030;Name=CPT_Pipo_030
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
149 Pipo GenBank mRNA 12497 14815 . + 1 ID=CPT_Pipo_030.t01;Parent=CPT_Pipo_030
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
150 Pipo GenBank CDS 12497 14815 . + 1 ID=CPT_Pipo_030.p01;Name=CPT_Pipo_030;Note=IPR001098,score%3D0 %5BphiKMVp19%5D;Parent=CPT_Pipo_030.t01;product=putative DNA directed DNA polymerase
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
151 Pipo GenBank exon 12497 14815 . + 1 Parent=CPT_Pipo_030.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
152 Pipo GenBank RBS 12485 12488 . + 1 Name=CPT_Pipo_030;Parent=CPT_Pipo_030
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
153 Pipo GenBank gene 14794 15038 . + 1 ID=CPT_Pipo_031;Name=CPT_Pipo_031
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
154 Pipo GenBank mRNA 14805 15038 . + 1 ID=CPT_Pipo_031.t01;Parent=CPT_Pipo_031
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
155 Pipo GenBank CDS 14805 15038 . + 1 ID=CPT_Pipo_031.p01;Name=CPT_Pipo_031;Note=1.07353e-42 %5BAcinetobacter phage Fri1%5D;Parent=CPT_Pipo_031.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
156 Pipo GenBank exon 14805 15038 . + 1 Parent=CPT_Pipo_031.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
157 Pipo GenBank RBS 14794 14796 . + 1 Name=CPT_Pipo_031;Parent=CPT_Pipo_031
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
158 Pipo GenBank gene 15023 15925 . + 1 ID=CPT_Pipo_032;Name=CPT_Pipo_032
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
159 Pipo GenBank mRNA 15035 15925 . + 1 ID=CPT_Pipo_032.t01;Parent=CPT_Pipo_032
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
160 Pipo GenBank CDS 15035 15925 . + 1 ID=CPT_Pipo_032.p01;Name=CPT_Pipo_032;Note=1.95456e-38 %5BphiKMVp21%5D,contains membrane domain in the extracellular region.;Parent=CPT_Pipo_032.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
161 Pipo GenBank exon 15035 15925 . + 1 Parent=CPT_Pipo_032.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
162 Pipo GenBank RBS 15023 15027 . + 1 Name=CPT_Pipo_032;Parent=CPT_Pipo_032
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
163 Pipo GenBank gene 15972 16101 . + 1 ID=CPT_Pipo_033;Name=CPT_Pipo_033
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
164 Pipo GenBank mRNA 15982 16101 . + 1 ID=CPT_Pipo_033.t01;Parent=CPT_Pipo_033
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
165 Pipo GenBank CDS 15982 16101 . + 1 ID=CPT_Pipo_033.p01;Name=CPT_Pipo_033;Note=3.59438e-20 %5BAcinetobacter phage Abp1%5D,PubMed: 24153188,hhpred ID: 9162599 HHPR,potential ATPase-dependent domain;Parent=CPT_Pipo_033.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
166 Pipo GenBank exon 15982 16101 . + 1 Parent=CPT_Pipo_033.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
167 Pipo GenBank RBS 15972 15976 . + 1 Name=CPT_Pipo_033;Parent=CPT_Pipo_033
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
168 Pipo GenBank gene 16123 17087 . + 1 ID=CPT_Pipo_034;Name=CPT_Pipo_034
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
169 Pipo GenBank mRNA 16134 17087 . + 1 ID=CPT_Pipo_034.t01;Parent=CPT_Pipo_034
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
170 Pipo GenBank CDS 16134 17087 . + 1 ID=CPT_Pipo_034.p01;Name=CPT_Pipo_034;Note=1.21811e-55 %5BphiKMVp22 protein%5D;Parent=CPT_Pipo_034.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
171 Pipo GenBank exon 16134 17087 . + 1 Parent=CPT_Pipo_034.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
172 Pipo GenBank RBS 16123 16126 . + 1 Name=CPT_Pipo_034;Parent=CPT_Pipo_034
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
173 Pipo GenBank gene 17064 17646 . + 1 ID=CPT_Pipo_035;Name=CPT_Pipo_035
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
174 Pipo GenBank mRNA 17077 17646 . + 1 ID=CPT_Pipo_035.t01;Parent=CPT_Pipo_035
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
175 Pipo GenBank CDS 17077 17646 . + 1 ID=CPT_Pipo_035.p01;Name=CPT_Pipo_035;Note=1.49572e-124 %5BAcinetobacter phage vB_AbaP_B09_Aci08%5D,hhpred ID: 9993830 HHPR hits: 3H38_A%2C 1MIW_A%2C 3AQL_B,potential putative tRNA nucleotidyl transferase-related protein;Parent=CPT_Pipo_035.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
176 Pipo GenBank exon 17077 17646 . + 1 Parent=CPT_Pipo_035.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
177 Pipo GenBank RBS 17064 17067 . + 1 Name=CPT_Pipo_035;Parent=CPT_Pipo_035
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
178 Pipo GenBank gene 17630 18083 . + 1 ID=CPT_Pipo_036;Name=CPT_Pipo_036
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
179 Pipo GenBank mRNA 17643 18083 . + 1 ID=CPT_Pipo_036.t01;Parent=CPT_Pipo_036
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
180 Pipo GenBank CDS 17643 18083 . + 1 ID=CPT_Pipo_036.p01;Name=CPT_Pipo_036;Note=6.07803e-35,NP_877462.1%5BPseudomonas phage phiKMV%5D,IPR004211;Parent=CPT_Pipo_036.t01;product=putative DNA endonuclease VII
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
181 Pipo GenBank exon 17643 18083 . + 1 Parent=CPT_Pipo_036.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
182 Pipo GenBank RBS 17630 17632 . + 1 Name=CPT_Pipo_036;Parent=CPT_Pipo_036
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
183 Pipo GenBank gene 18074 19022 . + 1 ID=CPT_Pipo_037;Name=CPT_Pipo_037
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
184 Pipo GenBank mRNA 18087 19022 . + 1 ID=CPT_Pipo_037.t01;Parent=CPT_Pipo_037
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
185 Pipo GenBank CDS 18087 19022 . + 1 ID=CPT_Pipo_037.p01;Name=CPT_Pipo_037;Note=InterPro:IPR004843,Metallo-dependent phosphatase-like;Parent=CPT_Pipo_037.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
186 Pipo GenBank exon 18087 19022 . + 1 Parent=CPT_Pipo_037.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
187 Pipo GenBank RBS 18074 18077 . + 1 Name=CPT_Pipo_037;Parent=CPT_Pipo_037
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
188 Pipo GenBank gene 19007 19672 . + 1 ID=CPT_Pipo_038;Name=CPT_Pipo_038
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
189 Pipo GenBank mRNA 19022 19672 . + 1 ID=CPT_Pipo_038.t01;Parent=CPT_Pipo_038
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
190 Pipo GenBank CDS 19022 19672 . + 1 ID=CPT_Pipo_038.p01;Name=CPT_Pipo_038;Note=2.64031e-7,NP_944963.1,InterPro:IPR027417;Parent=CPT_Pipo_038.t01;product=deoxynucleotide monophosphate kinase
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
191 Pipo GenBank exon 19022 19672 . + 1 Parent=CPT_Pipo_038.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
192 Pipo GenBank RBS 19007 19011 . + 1 Name=CPT_Pipo_038;Parent=CPT_Pipo_038
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
193 Pipo GenBank gene 19671 22098 . + 1 ID=CPT_Pipo_039;Name=CPT_Pipo_039
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
194 Pipo GenBank mRNA 19681 22098 . + 1 ID=CPT_Pipo_039.t01;Parent=CPT_Pipo_039
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
195 Pipo GenBank CDS 19681 22098 . + 1 ID=CPT_Pipo_039.p01;Name=CPT_Pipo_039;Note=3.40462e-76 NP_041960.1,IPR002092,T7-like RNA polymerase;Parent=CPT_Pipo_039.t01;product=RNA polymerase
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
196 Pipo GenBank exon 19681 22098 . + 1 Parent=CPT_Pipo_039.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
197 Pipo GenBank RBS 19671 19675 . + 1 Name=CPT_Pipo_039;Parent=CPT_Pipo_039
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
198 Pipo GenBank gene 22190 22399 . + 1 ID=CPT_Pipo_040;Name=CPT_Pipo_040
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
199 Pipo GenBank mRNA 22202 22399 . + 1 ID=CPT_Pipo_040.t01;Parent=CPT_Pipo_040
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
200 Pipo GenBank CDS 22202 22399 . + 1 ID=CPT_Pipo_040.p01;Name=CPT_Pipo_040;Note=1.62918e-40 %5BAcinetobacter phage vB_AbaP_AS11%5D;Parent=CPT_Pipo_040.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
201 Pipo GenBank exon 22202 22399 . + 1 Parent=CPT_Pipo_040.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
202 Pipo GenBank RBS 22190 22194 . + 1 Name=CPT_Pipo_040;Parent=CPT_Pipo_040
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
203 Pipo GenBank gene 22383 22647 . + 1 ID=CPT_Pipo_041;Name=CPT_Pipo_041
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
204 Pipo GenBank mRNA 22396 22647 . + 1 ID=CPT_Pipo_041.t01;Parent=CPT_Pipo_041
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
205 Pipo GenBank CDS 22396 22647 . + 1 ID=CPT_Pipo_041.p01;Name=CPT_Pipo_041;Note=6.15327e-54 blast to %5BAcinetobacter phage vB_AbaP_B09_Aci08%5D;Parent=CPT_Pipo_041.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
206 Pipo GenBank exon 22396 22647 . + 1 Parent=CPT_Pipo_041.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
207 Pipo GenBank RBS 22383 22387 . + 1 Name=CPT_Pipo_041;Parent=CPT_Pipo_041
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
208 Pipo GenBank gene 22646 24212 . + 1 ID=CPT_Pipo_042;Name=CPT_Pipo_042
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
209 Pipo GenBank mRNA 22656 24212 . + 1 ID=CPT_Pipo_042.t01;Parent=CPT_Pipo_042
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
210 Pipo GenBank CDS 22656 24212 . + 1 ID=CPT_Pipo_042.p01;Name=CPT_Pipo_042;Note=InterPro:IPR020991,2.31306e-51 NP_041995.1%5Bbacteriophage T7%5D;Parent=CPT_Pipo_042.t01;product=head-tail connector protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
211 Pipo GenBank exon 22656 24212 . + 1 Parent=CPT_Pipo_042.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
212 Pipo GenBank RBS 22646 22650 . + 1 Name=CPT_Pipo_042;Parent=CPT_Pipo_042
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
213 Pipo GenBank gene 24211 25081 . + 1 ID=CPT_Pipo_043;Name=CPT_Pipo_043
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
214 Pipo GenBank mRNA 24221 25081 . + 1 ID=CPT_Pipo_043.t01;Parent=CPT_Pipo_043
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
215 Pipo GenBank CDS 24221 25081 . + 1 ID=CPT_Pipo_043.p01;Name=CPT_Pipo_043;Note=score%3D0 blast to %5BAcinetobacter phage vB_AbaP_B3%5D;Parent=CPT_Pipo_043.t01;product=putative scaffolding protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
216 Pipo GenBank exon 24221 25081 . + 1 Parent=CPT_Pipo_043.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
217 Pipo GenBank RBS 24211 24215 . + 1 Name=CPT_Pipo_043;Parent=CPT_Pipo_043
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
218 Pipo GenBank gene 25083 26128 . + 1 ID=CPT_Pipo_044;Name=CPT_Pipo_044
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
219 Pipo GenBank mRNA 25097 26128 . + 1 ID=CPT_Pipo_044.t01;Parent=CPT_Pipo_044
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
220 Pipo GenBank CDS 25097 26128 . + 1 ID=CPT_Pipo_044.p01;Name=CPT_Pipo_044;Note=1.92669e-49 NP_877471.1 %5BphiKMV%5D PMID: 16436440,Q7Y2D3;Parent=CPT_Pipo_044.t01;product=major capsid protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
221 Pipo GenBank exon 25097 26128 . + 1 Parent=CPT_Pipo_044.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
222 Pipo GenBank RBS 25083 25087 . + 1 Name=CPT_Pipo_044;Parent=CPT_Pipo_044
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
223 Pipo GenBank gene 26170 26369 . + 1 ID=CPT_Pipo_045;Name=CPT_Pipo_045
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
224 Pipo GenBank mRNA 26184 26369 . + 1 ID=CPT_Pipo_045.t01;Parent=CPT_Pipo_045
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
225 Pipo GenBank CDS 26184 26369 . + 1 ID=CPT_Pipo_045.p01;Name=CPT_Pipo_045;Note=detected coil segment,PMID: 20816983,hhpred ID: 1724640 HHPR pdb: 2XDJ;Parent=CPT_Pipo_045.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
226 Pipo GenBank exon 26184 26369 . + 1 Parent=CPT_Pipo_045.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
227 Pipo GenBank RBS 26170 26174 . + 1 Name=CPT_Pipo_045;Parent=CPT_Pipo_045
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
228 Pipo GenBank gene 26371 26674 . + 1 ID=CPT_Pipo_046;Name=CPT_Pipo_046
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
229 Pipo GenBank mRNA 26381 26674 . + 1 ID=CPT_Pipo_046.t01;Parent=CPT_Pipo_046
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
230 Pipo GenBank CDS 26381 26674 . + 1 ID=CPT_Pipo_046.p01;Name=CPT_Pipo_046;Note=potential tail needle. hhpred ID number: 3392758 HHPR pdb hit: 4ZXQ,PMID: 26574546;Parent=CPT_Pipo_046.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
231 Pipo GenBank exon 26381 26674 . + 1 Parent=CPT_Pipo_046.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
232 Pipo GenBank RBS 26371 26375 . + 1 Name=CPT_Pipo_046;Parent=CPT_Pipo_046
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
233 Pipo GenBank gene 26730 27372 . + 1 ID=CPT_Pipo_047;Name=CPT_Pipo_047
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
234 Pipo GenBank mRNA 26746 27372 . + 1 ID=CPT_Pipo_047.t01;Parent=CPT_Pipo_047
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
235 Pipo GenBank CDS 26746 27372 . + 1 ID=CPT_Pipo_047.p01;Name=CPT_Pipo_047;Note=InterPro:IPR033767 tail tubular protein gp11,1.20181e-16 NP_877472.1;Parent=CPT_Pipo_047.t01;product=tail tubular protein A
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
236 Pipo GenBank exon 26746 27372 . + 1 Parent=CPT_Pipo_047.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
237 Pipo GenBank RBS 26730 26733 . + 1 Name=CPT_Pipo_047;Parent=CPT_Pipo_047
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
238 Pipo GenBank gene 27371 29672 . + 1 ID=CPT_Pipo_048;Name=CPT_Pipo_048
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
239 Pipo GenBank mRNA 27381 29672 . + 1 ID=CPT_Pipo_048.t01;Parent=CPT_Pipo_048
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
240 Pipo GenBank CDS 27381 29672 . + 1 ID=CPT_Pipo_048.p01;Name=CPT_Pipo_048;Note=7.22201e-87 phiKMV;Parent=CPT_Pipo_048.t01;product=tail tubular protein B
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
241 Pipo GenBank exon 27381 29672 . + 1 Parent=CPT_Pipo_048.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
242 Pipo GenBank RBS 27371 27375 . + 1 Name=CPT_Pipo_048;Parent=CPT_Pipo_048
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
243 Pipo GenBank gene 29659 30343 . + 1 ID=CPT_Pipo_049;Name=CPT_Pipo_049
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
244 Pipo GenBank mRNA 29672 30343 . + 1 ID=CPT_Pipo_049.t01;Parent=CPT_Pipo_049
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
245 Pipo GenBank CDS 29672 30343 . + 1 ID=CPT_Pipo_049.p01;Name=CPT_Pipo_049;Note=7.47139e-159 %5BAcinetobacter phage IME200%5D;Parent=CPT_Pipo_049.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
246 Pipo GenBank exon 29672 30343 . + 1 Parent=CPT_Pipo_049.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
247 Pipo GenBank RBS 29659 29662 . + 1 Name=CPT_Pipo_049;Parent=CPT_Pipo_049
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
248 Pipo GenBank gene 30347 33241 . + 1 ID=CPT_Pipo_050;Name=CPT_Pipo_050
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
249 Pipo GenBank mRNA 30356 33241 . + 1 ID=CPT_Pipo_050.t01;Parent=CPT_Pipo_050
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
250 Pipo GenBank CDS 30356 33241 . + 1 ID=CPT_Pipo_050.p01;Name=CPT_Pipo_050;Note=1.5824e-89 %5BAcinetobacter phage AB3%5D;Parent=CPT_Pipo_050.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
251 Pipo GenBank exon 30356 33241 . + 1 Parent=CPT_Pipo_050.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
252 Pipo GenBank RBS 30347 30351 . + 1 Name=CPT_Pipo_050;Parent=CPT_Pipo_050
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
253 Pipo GenBank gene 33240 36349 . + 1 ID=CPT_Pipo_051;Name=CPT_Pipo_051
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
254 Pipo GenBank mRNA 33251 36349 . + 1 ID=CPT_Pipo_051.t01;Parent=CPT_Pipo_051
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
255 Pipo GenBank CDS 33251 36349 . + 1 ID=CPT_Pipo_051.p01;Name=CPT_Pipo_051;Note=putative membrane protein,blast to phiKMV with score %3D7.0935e-9;Parent=CPT_Pipo_051.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
256 Pipo GenBank exon 33251 36349 . + 1 Parent=CPT_Pipo_051.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
257 Pipo GenBank RBS 33240 33245 . + 1 Name=CPT_Pipo_051;Parent=CPT_Pipo_051
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
258 Pipo GenBank gene 36341 38392 . + 1 ID=CPT_Pipo_052;Name=CPT_Pipo_052
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
259 Pipo GenBank mRNA 36356 38392 . + 1 ID=CPT_Pipo_052.t01;Parent=CPT_Pipo_052
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
260 Pipo GenBank CDS 36356 38392 . + 1 ID=CPT_Pipo_052.p01;Name=CPT_Pipo_052;Note=potential tail fiber/tail spike,5924656 HHPR hit 5JS4_C%3B 6EU4_C%3B 5W5P %28To be published by Leiman%29,PMID: 28209973;Parent=CPT_Pipo_052.t01;product=tailspike protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
261 Pipo GenBank exon 36356 38392 . + 1 Parent=CPT_Pipo_052.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
262 Pipo GenBank RBS 36341 36344 . + 1 Name=CPT_Pipo_052;Parent=CPT_Pipo_052
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
263 Pipo GenBank gene 38392 38737 . + 1 ID=CPT_Pipo_053;Name=CPT_Pipo_053
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
264 Pipo GenBank mRNA 38402 38737 . + 1 ID=CPT_Pipo_053.t01;Parent=CPT_Pipo_053
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
265 Pipo GenBank CDS 38402 38737 . + 1 ID=CPT_Pipo_053.p01;Name=CPT_Pipo_053;Note=7.76278e-74,IPR006481,detected three transmembrane domains;Parent=CPT_Pipo_053.t01;product=holin
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
266 Pipo GenBank exon 38402 38737 . + 1 Parent=CPT_Pipo_053.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
267 Pipo GenBank RBS 38392 38396 . + 1 Name=CPT_Pipo_053;Parent=CPT_Pipo_053
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
268 Pipo GenBank gene 38715 39281 . + 1 ID=CPT_Pipo_054;Name=CPT_Pipo_054
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
269 Pipo GenBank mRNA 38724 39281 . + 1 ID=CPT_Pipo_054.t01;Parent=CPT_Pipo_054
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
270 Pipo GenBank CDS 38724 39281 . + 1 ID=CPT_Pipo_054.p01;Name=CPT_Pipo_054;Note=IPR023346 1.63e-19,Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide %281-%3E4%29-beta-linkages in chitin and chitodextrins.;Parent=CPT_Pipo_054.t01;product=endolysin
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
271 Pipo GenBank exon 38724 39281 . + 1 Parent=CPT_Pipo_054.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
272 Pipo GenBank RBS 38715 38718 . + 1 Name=CPT_Pipo_054;Parent=CPT_Pipo_054
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
273 Pipo GenBank gene 39280 39598 . + 1 ID=CPT_Pipo_055;Name=CPT_Pipo_055
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
274 Pipo GenBank mRNA 39290 39598 . + 1 ID=CPT_Pipo_055.t01;Parent=CPT_Pipo_055
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
275 Pipo GenBank CDS 39290 39598 . + 1 ID=CPT_Pipo_055.p01;Name=CPT_Pipo_055;Note=1.10536e-8 %5BphiKMV%5D;Parent=CPT_Pipo_055.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
276 Pipo GenBank exon 39290 39598 . + 1 Parent=CPT_Pipo_055.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
277 Pipo GenBank RBS 39280 39284 . + 1 Name=CPT_Pipo_055;Parent=CPT_Pipo_055
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
278 Pipo GenBank gene 39598 41545 . + 1 ID=CPT_Pipo_056;Name=CPT_Pipo_056
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
279 Pipo GenBank mRNA 39608 41545 . + 1 ID=CPT_Pipo_056.t01;Parent=CPT_Pipo_056
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
280 Pipo GenBank CDS 39608 41545 . + 1 ID=CPT_Pipo_056.p01;Name=CPT_Pipo_056;Note=4.73143e-112,probably DNA maturase B phiKMV;Parent=CPT_Pipo_056.t01;product=large terminase subunit
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
281 Pipo GenBank exon 39608 41545 . + 1 Parent=CPT_Pipo_056.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
282 Pipo GenBank RBS 39598 39602 . + 1 Name=CPT_Pipo_056;Parent=CPT_Pipo_056
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
283 Pipo GenBank gene 41528 41676 . + 1 ID=CPT_Pipo_057;Name=CPT_Pipo_057
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
284 Pipo GenBank mRNA 41542 41676 . + 1 ID=CPT_Pipo_057.t01;Parent=CPT_Pipo_057
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
285 Pipo GenBank CDS 41542 41676 . + 1 ID=CPT_Pipo_057.p01;Name=CPT_Pipo_057;Note=1.21677e-21 Acinetobacter phage vB_AbaP_B3;Parent=CPT_Pipo_057.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
286 Pipo GenBank exon 41542 41676 . + 1 Parent=CPT_Pipo_057.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
287 Pipo GenBank RBS 41528 41533 . + 1 Name=CPT_Pipo_057;Parent=CPT_Pipo_057
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
288 Pipo GenBank gene 41624 41839 . + 1 ID=CPT_Pipo_058;Name=CPT_Pipo_058
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
289 Pipo GenBank mRNA 41636 41839 . + 1 ID=CPT_Pipo_058.t01;Parent=CPT_Pipo_058
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
290 Pipo GenBank CDS 41636 41839 . + 1 ID=CPT_Pipo_058.p01;Name=CPT_Pipo_058;Note=1.12427e-36,Acinetobacter phage vB_AbaP_B5;Parent=CPT_Pipo_058.t01;product=hypothetical protein
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
291 Pipo GenBank exon 41636 41839 . + 1 Parent=CPT_Pipo_058.t01
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
292 Pipo GenBank RBS 41624 41628 . + 1 Name=CPT_Pipo_058;Parent=CPT_Pipo_058