Mercurial > repos > cristian > notos

diff tool_dependencies.xml @ 0:1535ffddeff4 draft

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planemo upload commit a7ac27de550a07fd6a3e3ea3fb0de65f3a10a0e6-dirty
author cristian
date Thu, 07 Sep 2017 08:51:57 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Sep 07 08:51:57 2017 -0400
@@ -0,0 +1,51 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.2.1">
+        <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="libxml2" version="2.9.1">
+        <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="notos" version="1.0.0">
+        <install version="1.0">
+            <actions>
+                <action type="setup_r_environment">
+                    <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.2.1" />
+                    </repository>
+                    <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
+                    <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="libxml2" version="2.9.1" />
+                    </repository>
+                    <package sha256sum="f920baa2a0ef7082155c8b666851af0c77534af8b2ca0cd067e7d56fdf3ec501">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/getopt_1.20.0.tar.gz?raw=true
+                    </package>
+                    <package sha256sum="bca93c8646b731758f1cc888ee6c25e8c1ecf2364d7f556489bd879413d20abd">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/optparse_1.3.2.tar.gz?raw=true
+                    </package>
+                    <package sha256sum="ae4ea23385776eb0c06c992a3da6b0256a6c84558c1061034c5a1fbdd43d05b8">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/iterators_1.0.8.tar.gz?raw=true
+                    </package>
+                    <package sha256sum="1ef03f770f726a62e3753f2402eb26b226245958fa99d570d003fc9e47d35881">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/foreach_1.4.3.tar.gz?raw=true
+                    </package>
+                    <package sha256sum="70024b6950025cc027022ee409f382e5ad3680c0a25bcd404bfc16418be8add5">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/doParallel_1.0.10.tar.gz?raw=true
+                    </package>
+                    <package sha256sum="2a3b81e60dafdd092d2bdd3513d7038855ca7d113dc71df1229f7518382a3e39">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/moments_0.14.tar.gz?raw=true
+                    </package>
+                    <package sha256sum="7f430cf3ebb95bac806fbf093fb1e2112deba47416a93be8d5d1064b76bc0015">
+						https://github.com/cche/KDEAnalysis_deps/blob/master/sfsmisc_1.1-0.tar.gz?raw=true
+                    </package>
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="append_to" name="R_LIBS">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+			***CHANGE THIS*****
+        </readme>
+    </package>
+</tool_dependency>