|
0
|
1 MOSAIK v.2 wrapper
|
|
|
2 ==================
|
|
|
3
|
|
|
4 Configuration
|
|
|
5 -------------
|
|
|
6
|
|
|
7 mosaik2 tool may be configured to use more than one CPU core by selecting an appropriate destination for this tool in Galaxy job_conf.xml file (see https://wiki.galaxyproject.org/Admin/Config/Jobs and https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster ).
|
|
|
8
|
|
|
9 If you are using Galaxy release_2013.11.04 or later, this tool will automatically use the number of CPU cores allocated by the job runner according to the configuration of the destination selected for this tool.
|
|
|
10
|
|
|
11 If instead you are using an older Galaxy release, you should also add a line
|
|
|
12
|
|
|
13 GALAXY_SLOTS=N; export GALAXY_SLOTS
|
|
|
14
|
|
|
15 (where N is the number of CPU cores allocated by the job runner for this tool) to the file
|
|
|
16
|
|
|
17 <tool_dependencies_dir>/mosaik/2.2.26/crs4/mosaik2/<hash_string>/env.sh
|
|
|
18
|
|
|
19 Version history
|
|
|
20 ---------------
|
|
|
21
|
|
|
22 - Release 0: Initial release in the Tool Shed.
|
|
|
23
|
|
|
24 Development
|
|
|
25 -----------
|
|
|
26
|
|
|
27 Development is hosted at https://bitbucket.org/crs4/orione-tools . Contributions and bug reports are very welcome!
|
