Mercurial > repos > crs4 > mosaik2
comparison tool-data/mosaik_index.loc.sample @ 0:6adb6e16b00f draft
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author | crs4 |
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date | Wed, 02 Apr 2014 12:32:52 -0400 |
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-1:000000000000 | 0:6adb6e16b00f |
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1 #This is a sample file distributed with Galaxy that enables tools | |
2 #to use a directory of Mosaik indexed sequences data files. You will need | |
3 #to create these data files and then create a mosaik_index.loc file | |
4 #similar to this one (store it in this directory) that points to | |
5 #the directories in which those files are stored. The mosaik_index.loc | |
6 #file has this format (longer white space is the TAB character): | |
7 # | |
8 #<unique_build_id> <dbkey> <display_name> <fasta_file_path> | |
9 # | |
10 #So, for example, if you had hg18 indexed and stored in | |
11 #/depot/data2/galaxy/mosaik/hg18/ | |
12 #then the mosaik_index.loc entry would look like this: | |
13 # | |
14 #hg18 hg18 hg18 Pretty /depot/data2/galaxy/mosaik/hg18/hg18.fa | |
15 # | |
16 #and your /depot/data2/galaxy/mosaik/hg18/ directory | |
17 #would contain the following files: | |
18 #TODO handle mosaik jump tables. | |
19 # |