Mercurial > repos > crs4 > prokka
annotate COPYING @ 3:fffa1ae330ae draft
Use $GALAXY_SLOTS instead of $PROKKA_SITE_OPTIONS. Upgrade Barrnap dependency to v. 0.3. Upgrade Infernal dependency to v. 1.1. Depend on package_gnu_parallel_20131122 (requires Galaxy release_2013.11.04 or later).
author | crs4 |
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date | Mon, 09 Dec 2013 04:58:14 -0500 |
parents | 4bafaa074484 |
children | b9fea998270a |
rev | line source |
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0 | 1 Copyright © 2013 CRS4 Srl. http://www.crs4.it/ |
2
4bafaa074484
Merge with Lionel Guy's wrapper. Directly call prokka, remove prokka.py . Add locustag, increment, gffver, compliant, addgenes, genus, species, strain, plasmid, gcode, usegenus, metagenome, fast, evalue, norrna, notrna params. Update BLAST+ dependency to 2.2.28. Add dependencies on prodigal and barrnap. Add readme.rst .
crs4
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2 Copyright © 2013 Lionel Guy |
0 | 3 Created by: |
4 Paolo Uva <paolo.uva@crs4.it> | |
5 Nicola Soranzo <nicola.soranzo@crs4.it> | |
2
4bafaa074484
Merge with Lionel Guy's wrapper. Directly call prokka, remove prokka.py . Add locustag, increment, gffver, compliant, addgenes, genus, species, strain, plasmid, gcode, usegenus, metagenome, fast, evalue, norrna, notrna params. Update BLAST+ dependency to 2.2.28. Add dependencies on prodigal and barrnap. Add readme.rst .
crs4
parents:
0
diff
changeset
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6 Lionel Guy <lionel.guy@icm.uu.se> |
0 | 7 |
8 Permission is hereby granted, free of charge, to any person obtaining a | |
9 copy of this software and associated documentation files (the | |
10 "Software"), to deal in the Software without restriction, including | |
11 without limitation the rights to use, copy, modify, merge, publish, | |
12 distribute, sublicense, and/or sell copies of the Software, and to | |
13 permit persons to whom the Software is furnished to do so, subject to | |
14 the following conditions: | |
15 | |
16 The above copyright notice and this permission notice shall be included | |
17 in all copies or substantial portions of the Software. | |
18 | |
19 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS | |
20 OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF | |
21 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. | |
22 IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY | |
23 CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, | |
24 TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE | |
25 SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |