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Use <stdio> because prokka writes some warnings on stderr. Update Orione citation. Update Prokka citation. Support Prokka 1.10. Upgrade dependencies to package_minced_0_1_6, package_barrnap_0_5 and package_tbl2asn_23_7. Added --proteins option. Add <citations>.
author crs4
date Mon, 27 Oct 2014 06:45:52 -0400
parents b9fea998270a
children f5e44aad6498
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5:b9fea998270a 6:3ad7ef0ba385
2 Copyright © 2013 Lionel Guy 2 Copyright © 2013 Lionel Guy
3 Created by: 3 Created by:
4 Paolo Uva <paolo.uva@crs4.it> 4 Paolo Uva <paolo.uva@crs4.it>
5 Nicola Soranzo <nicola.soranzo@crs4.it> 5 Nicola Soranzo <nicola.soranzo@crs4.it>
6 Lionel Guy <lionel.guy@icm.uu.se> 6 Lionel Guy <lionel.guy@icm.uu.se>
7 Philip Mabon <philipmabon@gmail.com>
7 8
8 Permission is hereby granted, free of charge, to any person obtaining a 9 Permission is hereby granted, free of charge, to any person obtaining a
9 copy of this software and associated documentation files (the 10 copy of this software and associated documentation files (the
10 "Software"), to deal in the Software without restriction, including 11 "Software"), to deal in the Software without restriction, including
11 without limitation the rights to use, copy, modify, merge, publish, 12 without limitation the rights to use, copy, modify, merge, publish,