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Fix SSAKE download URL (thanks to Graham Etherington for reporting this). Update Orione citation.
author crs4
date Thu, 06 Mar 2014 11:50:08 -0500
parents 386166019772
children
comparison
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1:386166019772 2:f20db7280f89
86 .. _CRS4 Srl.: http://www.crs4.it/ 86 .. _CRS4 Srl.: http://www.crs4.it/
87 .. _MIT license: http://opensource.org/licenses/MIT 87 .. _MIT license: http://opensource.org/licenses/MIT
88 88
89 If you use this tool in Galaxy, please cite |Cuccuru2013|_. 89 If you use this tool in Galaxy, please cite |Cuccuru2013|_.
90 90
91 .. |Cuccuru2013| replace:: Cuccuru, G., Orsini, M., Pinna, A., Sbardellati, A., Soranzo, N., Travaglione, A., Uva, P., Zanetti, G., Fotia, G. (2013) Orione, a web-based framework for NGS analysis in microbiology. *Submitted* 91 .. |Cuccuru2013| replace:: Cuccuru, G., Orsini, M., Pinna, A., Sbardellati, A., Soranzo, N., Travaglione, A., Uva, P., Zanetti, G., Fotia, G. (2014) Orione, a web-based framework for NGS analysis in microbiology. *Bioinformatics*, accepted
92 .. _Cuccuru2013: http://orione.crs4.it/ 92 .. _Cuccuru2013: http://orione.crs4.it/
93 93
94 This tool uses `SSAKE`_, which is licensed separately. Please cite |Warren2007|_. 94 This tool uses `SSAKE`_, which is licensed separately. Please cite |Warren2007|_.
95 95
96 .. _SSAKE: http://www.bcgsc.ca/platform/bioinfo/software/ssake/ 96 .. _SSAKE: http://www.bcgsc.ca/platform/bioinfo/software/ssake/