Mercurial > repos > crs4 > taxonomy_krona_chart
changeset 10:e9005d1f3cfd draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/taxonomy_krona_chart commit 46ae76d42d29ce02cf05b6ab735e0c305a86f9cd"
| author | iuc |
|---|---|
| date | Fri, 18 Dec 2020 16:16:12 +0000 |
| parents | 1334cb4c6b68 |
| children | |
| files | taxonomy_krona_chart.xml test-data/krona_test1.html test-data/tax2.tax |
| diffstat | 3 files changed, 51 insertions(+), 6731 deletions(-) [+] |
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--- a/taxonomy_krona_chart.xml Sat Nov 30 13:05:03 2019 -0500 +++ b/taxonomy_krona_chart.xml Fri Dec 18 16:16:12 2020 +0000 @@ -1,4 +1,4 @@ -<tool id="taxonomy_krona_chart" name="Krona pie chart" version="2.7.1"> +<tool id="taxonomy_krona_chart" name="Krona pie chart" version="2.7.1+galaxy0"> <description>from taxonomic profile</description> <requirements> <requirement type="package" version="2.7.1">krona</requirement> @@ -10,22 +10,17 @@ #if $type_of_data.input[0].is_of_type('taxonomy'): ktImportGalaxy -d '${type_of_data.max_rank}' - -n '${root_name}' - -o '${output}' - ${combine_inputs} - #for $input_count, $input_dataset in enumerate( $type_of_data.input ): - '${input_dataset},${input_count}' - #end for #else: ktImportText - -n '${root_name}' - -o '${output}' - ${combine_inputs} - #for $input_dataset in $type_of_data.input: - #set $identifier=re.sub('[^\w\-\s]', '_', str($input_dataset.element_identifier)) - '${input_dataset},${identifier}' - #end for #end if + + -n '${root_name}' + -o '${output}' + ${combine_inputs} + #for $input_dataset in $type_of_data.input: + #set $identifier=re.sub('[^\w\-\s]', '_', str($input_dataset.element_identifier)) + '${input_dataset},${identifier}' + #end for && if [ -d '${output}.files' ] ; then mkdir '${output.extra_files_path}' && mv '${output}.files' '${output.extra_files_path}' ; fi ]]></command> @@ -79,7 +74,30 @@ <param name="max_rank" value="Genus"/> <param name="root_name" value="Root"/> <param name="combine_inputs" value="False"/> - <output name="output" file="krona_test1.html" ftype="html" lines_diff="102"/> + <output name="output" ftype="html"> + <assert_contents> + <has_text text="KRONA"/> + <has_text text="taxonomy_data"/> + <has_text text="Eukaryota"/> + <has_text text="Chordata"/> + <has_text text="Rodentia"/> + </assert_contents> + </output> + </test> + <test> + <param name="type_of_data_selector" value="taxonomy"/> + <param name="input" value="taxonomy_data.tax,tax2.tax" ftype="taxonomy" /> + <param name="max_rank" value="Genus"/> + <param name="root_name" value="Root"/> + <param name="combine_inputs" value="False"/> + <output name="output" ftype="html"> + <assert_contents> + <has_text text="KRONA"/> + <has_text text="taxonomy_data"/> + <has_text text="tax2"/> + <has_text text="Proteobacteria"/> + </assert_contents> + </output> </test> <test><!-- test with tabular inputs and multiple datasets --> <param name="type_of_data_selector" value="text"/>
--- a/test-data/krona_test1.html Sat Nov 30 13:05:03 2019 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,6716 +0,0 @@ -<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> -<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> - <head> - <meta charset="utf-8"/> - <link rel="shortcut icon" 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- <script id="notfound" type="text/javascript">window.onload=function(){document.body.innerHTML=""}</script> - <script language="javascript" type="text/javascript"> -{//----------------------------------------------------------------------------- -// -// PURPOSE -// -// Krona is a flexible tool for exploring the relative proportions of -// hierarchical data, such as metagenomic classifications, using a -// radial, space-filling display. It is implemented using HTML5 and -// JavaScript, allowing charts to be explored locally or served over the -// Internet, requiring only a current version of any major web -// browser. Krona charts can be created using an Excel template or from -// common bioinformatic formats using the provided conversion scripts. -// -// -// COPYRIGHT LICENSE -// -// Copyright (c) 2011, Battelle National Biodefense Institute (BNBI); -// all rights reserved. Authored by: Brian Ondov, Nicholas Bergman, and -// Adam Phillippy -// -// This Software was prepared for the Department of Homeland Security -// (DHS) by the Battelle National Biodefense Institute, LLC (BNBI) as -// part of contract HSHQDC-07-C-00020 to manage and operate the National -// Biodefense Analysis and Countermeasures Center (NBACC), a Federally -// Funded Research and Development Center. -// -// Redistribution and use in source and binary forms, with or without -// modification, are permitted provided that the following conditions are -// met: -// -// * Redistributions of source code must retain the above copyright -// notice, this list of conditions and the following disclaimer. -// -// * Redistributions in binary form must reproduce the above copyright -// notice, this list of conditions and the following disclaimer in the -// documentation and/or other materials provided with the distribution. -// -// * Neither the name of the Battelle National Biodefense Institute nor -// the names of its contributors may be used to endorse or promote -// products derived from this software without specific prior written -// permission. -// -// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS -// "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT -// LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR -// A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT -// HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, -// SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT -// LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, -// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY -// THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT -// (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE -// OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -// -// -// TRADEMARK LICENSE -// -// KRONA(TM) is a trademark of the Department of Homeland Security, and use -// of the trademark is subject to the following conditions: -// -// * Distribution of the unchanged, official code/software using the -// KRONA(TM) mark is hereby permitted by the Department of Homeland -// Security, provided that the software is distributed without charge -// and modification. -// -// * Distribution of altered source code/software using the KRONA(TM) mark -// is not permitted unless written permission has been granted by the -// Department of Homeland Security. -// -// -// FOR MORE INFORMATION VISIT -// -// https://github.com/marbl/Krona/wiki/ -// -//----------------------------------------------------------------------------- -} - - -var canvas; -var context; -var svg; // for snapshot mode -var collapse = true; -var collapseCheckBox; -var collapseLast; -var compress; -var compressCheckBox; -var maxAbsoluteDepthText; -var maxAbsoluteDepthButtonDecrease; -var maxAbsoluteDepthButtonIncrease; -var fontSize = 11; -var fontSizeText; -var fontSizeButtonDecrease; -var fontSizeButtonIncrease; -var fontSizeLast; -var radiusButtonDecrease; -var radiusButtonIncrease; -var shorten; -var shortenCheckBox; -var maxAbsoluteDepth; -var backButton; -var upButton; -var forwardButton; -var snapshotButton; -var snapshotMode = false; -var details; -var detailsName; -var search; -var searchResults; -var nSearchResults; -var useHueCheckBox; -var useHueDiv; -var datasetDropDown; -var datasetButtonLast; -var datasetButtonPrev; -var datasetButtonNext; -var keyControl; -var showKeys = true; -var linkButton; -var linkText; -var frame; - -// Node references. Note that the meanings of 'selected' and 'focused' are -// swapped in the docs. -// -var head; // the root of the entire tree -var selectedNode = 0; // the root of the current view -var focusNode = 0; // a node chosen for more info (single-click) -var highlightedNode = 0; // mouse hover node -var highlightingHidden = false; -var nodes = new Array(); -var currentNodeID = 0; // to iterate while loading - -var nodeHistory = new Array(); -var nodeHistoryPosition = 0; - -var dataEnabled = false; // true when supplemental files are present - -// store non-Krona GET variables so they can be passed on to links -// -var getVariables = new Array(); - -// selectedNodeLast is separate from the history, since we need to check -// properties of the last node viewed when browsing through the history -// -var selectedNodeLast = 0; -var zoomOut = false; - -// temporary zoom-in while holding the mouse button on a wedge -// -var quickLook = false; // true when in quick look state -var mouseDown = false; -var mouseDownTime; // to detect mouse button hold -var quickLookHoldLength = 200; - -var imageWidth; -var imageHeight; -var centerX; -var centerY; -var gRadius; -var updateViewNeeded = false; - -// Determines the angle that the pie chart starts at. 90 degrees makes the -// center label consistent with the children. -// -var rotationOffset = Math.PI / 2; - -var buffer; -var bufferFactor = .1; - -// The maps are the small pie charts showing the current slice being viewed. -// -var mapBuffer = 10; -var mapRadius = 0; -var maxMapRadius = 25; -var mapWidth = 150; -var maxLabelOverhang = Math.PI * 4.18; - -// Keys are the labeled boxes for slices in the highest level that are too thin -// to label. -// -var maxKeySizeFactor = 2; // will be multiplied by font size -var keySize; -var keys; -var keyBuffer = 10; -var currentKey; -var keyMinTextLeft; -var keyMinAngle; - -var minRingWidthFactor = 5; // will be multiplied by font size -var maxPossibleDepth; // the theoretical max that can be displayed -var maxDisplayDepth; // the actual depth that will be displayed -var headerHeight = 0;//document.getElementById('options').clientHeight; -var historySpacingFactor = 1.6; // will be multiplied by font size -var historyAlphaDelta = .25; - -// appearance -// -var lineOpacity = 0.3; -var saturation = 0.5; -var lightnessBase = 0.6; -var lightnessMax = .8; -var thinLineWidth = .3; -var highlightLineWidth = 1.5; -var labelBoxBuffer = 6; -var labelBoxRounding = 15; -var labelWidthFudge = 1.05; // The width of unshortened labels are set slightly - // longer than the name width so the animation - // finishes faster. -var fontNormal; -var fontBold; -var fontFamily = 'sans-serif'; -//var fontFaceBold = 'bold Arial'; -var nodeRadius; -var angleFactor; -var tickLength; -var compressedRadii; - -// colors -// -var highlightFill = 'rgba(255, 255, 255, .3)'; -var colorUnclassified = 'rgb(220,220,220)'; - -// label staggering -// -var labelOffsets; // will store the current offset at each depth -// -// This will store pointers to the last node that had a label in each offset (or "track") of a -// each depth. These will be used to shorten neighboring labels that would overlap. -// The [nLabelNodes] index will store the last node with a radial label. -// labelFirstNodes is the same, but to check for going all the way around and -// overlapping the first labels. -// -var labelLastNodes; -var labelFirstNodes; -// -var nLabelOffsets = 3; // the number of offsets to use - -var mouseX = -1; -var mouseY = -1; -var mouseXRel = -1; -var mouseYRel = -1; - -// tweening -// -var progress = 0; // for tweening; goes from 0 to 1. -var progressLast = 0; -var tweenFactor = 0; // progress converted by a curve for a smoother effect. -var tweenLength = 850; // in ms -var tweenCurvature = 13; -// -// tweenMax is used to scale the sigmoid function so its range is [0,1] for the -// domain [0,1] -// -var tweenMax = 1 / (1 + Math.exp(-tweenCurvature / 2)); -// -var tweenStartTime; - -// for framerate debug -// -var tweenFrames = 0; -var fpsDisplay = document.getElementById('frameRate'); - -// Arrays to translate xml attribute names into displayable attribute names -// -var attributes = new Array(); -// -var magnitudeIndex; // the index of attribute arrays used for magnitude -var membersAssignedIndex; -var membersSummaryIndex; - -// For defining gradients -// -var hueDisplayName; -var hueStopPositions; -var hueStopHues; -var hueStopText; - -// multiple datasets -// -var currentDataset = 0; -var lastDataset = 0; -var datasets = 1; -var datasetNames; -var datasetSelectSize = 30; -var datasetAlpha = new Tween(0, 0); -var datasetWidths = new Array(); -var datasetChanged; -var datasetSelectWidth = 50; - -window.onload = load; - -var image; -var hiddenPattern; -var loadingImage; -var logoImage; - -function backingScale() -{ - if ('devicePixelRatio' in window) - { - if (window.devicePixelRatio > 1) - { - return window.devicePixelRatio; - } - } - - return 1; -} - -function resize() -{ - imageWidth = window.innerWidth; - imageHeight = window.innerHeight; - - if ( ! snapshotMode ) - { - context.canvas.width = imageWidth * backingScale(); - context.canvas.height = imageHeight * backingScale(); - context.canvas.style.width = imageWidth + "px" - context.canvas.style.height = imageHeight + "px" - context.scale(backingScale(), backingScale()); - } - - if ( datasetDropDown ) - { - var ratio = - (datasetDropDown.offsetTop + datasetDropDown.clientHeight) * 2 / - imageHeight; - - if ( ratio > 1 ) - { - ratio = 1; - } - - ratio = Math.sqrt(ratio); - - datasetSelectWidth = - (datasetDropDown.offsetLeft + datasetDropDown.clientWidth) * ratio; - } - var leftMargin = datasets > 1 ? datasetSelectWidth + 30 : 0; - var minDimension = imageWidth - mapWidth - leftMargin > imageHeight ? - imageHeight : - imageWidth - mapWidth - leftMargin; - - maxMapRadius = minDimension * .03; - buffer = minDimension * bufferFactor; - margin = minDimension * .015; - centerX = (imageWidth - mapWidth - leftMargin) / 2 + leftMargin; - centerY = imageHeight / 2; - gRadius = minDimension / 2 - buffer; - //context.font = '11px sans-serif'; -} - -function handleResize() -{ - updateViewNeeded = true; -} - -function Attribute() -{ -} - -function Tween(start, end) -{ - this.start = start; - this.end = end; - this.current = this.start; - - this.current = function() - { - if ( progress == 1 || this.start == this.end ) - { - return this.end; - } - else - { - return this.start + tweenFactor * (this.end - this.start); - } - }; - - this.setTarget = function(target) - { - this.start = this.current(); - this.end = target; - } -} - -function Node() -{ - this.id = currentNodeID; - currentNodeID++; - nodes[this.id] = this; - - this.angleStart = new Tween(Math.PI, 0); - this.angleEnd = new Tween(Math.PI, 0); - this.radiusInner = new Tween(1, 1); - this.labelRadius = new Tween(1, 1); - this.labelWidth = new Tween(0, 0); - this.scale = new Tween(1, 1); // TEMP - this.radiusOuter = new Tween(1, 1); - - this.r = new Tween(255, 255); - this.g = new Tween(255, 255); - this.b = new Tween(255, 255); - - this.alphaLabel = new Tween(0, 1); - this.alphaLine = new Tween(0, 1); - this.alphaArc = new Tween(0, 0); - this.alphaWedge = new Tween(0, 1); - this.alphaOther = new Tween(0, 1); - this.alphaPattern = new Tween(0, 0); - this.children = Array(); - this.parent = 0; - - this.attributes = new Array(attributes.length); - - this.addChild = function(child) - { - this.children.push(child); - }; - - this.addLabelNode = function(depth, labelOffset) - { - if ( labelHeadNodes[depth][labelOffset] == 0 ) - { - // this will become the head node for this list - - labelHeadNodes[depth][labelOffset] = this; - this.labelPrev = this; - } - - var head = labelHeadNodes[depth][labelOffset]; - - this.labelNext = head; - this.labelPrev = head.labelPrev; - head.labelPrev.labelNext = this; - head.labelPrev = this; - } - - this.canDisplayDepth = function() - { - // whether this node is at a depth that can be displayed, according - // to the max absolute depth - - return this.depth <= maxAbsoluteDepth; - } - - this.canDisplayHistory = function() - { - var radiusInner; - - if ( compress ) - { - radiusInner = compressedRadii[0]; - } - else - { - radiusInner = nodeRadius; - } - - return ( - -this.labelRadius.end * gRadius + - historySpacingFactor * fontSize / 2 < - radiusInner * gRadius - ); - } - - this.canDisplayLabelCurrent = function() - { - return ( - (this.angleEnd.current() - this.angleStart.current()) * - (this.radiusInner.current() * gRadius + gRadius) >= - minWidth()); - } - - this.checkHighlight = function() - { - if ( this.children.length == 0 && this == focusNode ) - { - //return false; - } - - if ( this.hide ) - { - return false; - } - - if ( this.radiusInner.end == 1 ) - { - // compressed to the outside; don't check - - return false; - } - - var highlighted = false; - - var angleStartCurrent = this.angleStart.current() + rotationOffset; - var angleEndCurrent = this.angleEnd.current() + rotationOffset; - var radiusInner = this.radiusInner.current() * gRadius; - - for ( var i = 0; i < this.children.length; i++ ) - { - highlighted = this.children[i].checkHighlight(); - - if ( highlighted ) - { - return true; - } - } - - if ( this.radial ) - { - var angleText = (angleStartCurrent + angleEndCurrent) / 2; - var radiusText = (gRadius + radiusInner) / 2; - - context.rotate(angleText); - context.beginPath(); - context.moveTo(radiusText, -fontSize); - context.lineTo(radiusText, fontSize); - context.lineTo(radiusText + centerX, fontSize); - context.lineTo(radiusText + centerX, -fontSize); - context.closePath(); - context.rotate(-angleText); - - if ( context.isPointInPath(mouseXRel, mouseYRel) ) - { - var label = String(this.getPercentage()) + '%' + ' ' + this.name; - - if ( this.searchResultChildren() ) - { - label += searchResultString(this.searchResultChildren()); - } - - if - ( - Math.sqrt((mouseXRel) * (mouseXRel) + (mouseYRel) * (mouseYRel)) / backingScale() < - radiusText + measureText(label) - ) - { - highlighted = true; - } - } - } - else - { - for ( var i = 0; i < this.hiddenLabels.length; i++ ) - { - var hiddenLabel = this.hiddenLabels[i]; - - context.rotate(hiddenLabel.angle); - context.beginPath(); - context.moveTo(gRadius, -fontSize); - context.lineTo(gRadius, fontSize); - context.lineTo(gRadius + centerX, fontSize); - context.lineTo(gRadius + centerX, -fontSize); - context.closePath(); - context.rotate(-hiddenLabel.angle); - - if ( context.isPointInPath(mouseXRel, mouseYRel) ) - { - var label = String(hiddenLabel.value) + ' more'; - - if ( hiddenLabel.search ) - { - label += searchResultString(hiddenLabel.search); - } - - if - ( - Math.sqrt((mouseXRel) * (mouseXRel) + (mouseYRel) * (mouseYRel)) / backingScale() < - gRadius + fontSize + measureText(label) - ) - { - highlighted = true; - break; - } - } - } - } - - if ( ! highlighted && this != selectedNode && ! this.getCollapse() ) - { - context.beginPath(); - context.arc(0, 0, radiusInner, angleStartCurrent, angleEndCurrent, false); - context.arc(0, 0, gRadius, angleEndCurrent, angleStartCurrent, true); - context.closePath(); - - if ( context.isPointInPath(mouseXRel, mouseYRel) ) - { - highlighted = true; - } - - if - ( - ! highlighted && - (angleEndCurrent - angleStartCurrent) * - (radiusInner + gRadius) < - minWidth() && - this.getDepth() == selectedNode.getDepth() + 1 - ) - { - if ( showKeys && this.checkHighlightKey() ) - { - highlighted = true; - } - } - } - - if ( highlighted ) - { - if ( this != highlightedNode ) - { - // document.body.style.cursor='pointer'; - } - - highlightedNode = this; - } - - return highlighted; - } - - this.checkHighlightCenter = function() - { - if ( ! this.canDisplayHistory() ) - { - return; - } - - var cx = centerX; - var cy = centerY - this.labelRadius.end * gRadius; - //var dim = context.measureText(this.name); - - var width = this.nameWidth; - - if ( this.searchResultChildren() ) - { - var results = searchResultString(this.searchResultChildren()); - var dim = context.measureText(results); - width += dim.width; - } - - if - ( - mouseX > cx - width / 2 && - mouseX < cx + width / 2 && - mouseY > cy - historySpacingFactor * fontSize / 2 && - mouseY < cy + historySpacingFactor * fontSize / 2 - ) - { - highlightedNode = this; - return; - } - - if ( this.getParent() ) - { - this.getParent().checkHighlightCenter(); - } - } - - this.checkHighlightKey = function() - { - var offset = keyOffset(); - - var xMin = imageWidth - keySize - margin - this.keyNameWidth - keyBuffer; - var xMax = imageWidth - margin; - var yMin = offset; - var yMax = offset + keySize; - - currentKey++; - - return ( - mouseX > xMin && - mouseX < xMax && - mouseY > yMin && - mouseY < yMax); - } - - this.checkHighlightMap = function() - { - if ( this.parent ) - { - this.parent.checkHighlightMap(); - } - - if ( this.getCollapse() || this == focusNode ) - { - return; - } - - var box = this.getMapPosition(); - - if - ( - mouseX > box.x - mapRadius && - mouseX < box.x + mapRadius && - mouseY > box.y - mapRadius && - mouseY < box.y + mapRadius - ) - { - highlightedNode = this; - } - } - -/* this.collapse = function() - { - for (var i = 0; i < this.children.length; i++ ) - { - this.children[i] = this.children[i].collapse(); - } - - if - ( - this.children.length == 1 && - this.children[0].magnitude == this.magnitude - ) - { - this.children[0].parent = this.parent; - this.children[0].getDepth() = this.parent.getDepth() + 1; - return this.children[0]; - } - else - { - return this; - } - } -*/ - this.draw = function(labelMode, selected, searchHighlighted) - { - var depth = this.getDepth() - selectedNode.getDepth() + 1; -// var hidden = false; - - if ( selectedNode == this ) - { - selected = true; - } - - var angleStartCurrent = this.angleStart.current() + rotationOffset; - var angleEndCurrent = this.angleEnd.current() + rotationOffset; - var radiusInner = this.radiusInner.current() * gRadius; - var canDisplayLabelCurrent = this.canDisplayLabelCurrent(); - var hiddenSearchResults = false; - -/* if ( ! this.hide ) - { - for ( var i = 0; i < this.children.length; i++ ) - { - if ( this.children[i].hide && this.children[i].searchResults ) - { - hiddenSearchResults = true; - } - } - } -*/ - var drawChildren = - ( ! this.hide || ! this.hidePrev && progress < 1 ) && - ( ! this.hideAlone || ! this.hideAlonePrev && progress < 1 ); - -// if ( this.alphaWedge.current() > 0 || this.alphaLabel.current() > 0 ) - { - var lastChildAngleEnd = angleStartCurrent; - - if ( this.hasChildren() )//canDisplayChildren ) - { - lastChildAngleEnd = - this.children[this.children.length - 1].angleEnd.current() - + rotationOffset; - } - - if ( labelMode ) - { - var drawRadial = - !( - this.parent && - this.parent != selectedNode && - angleEndCurrent == this.parent.angleEnd.current() + rotationOffset - ); - - //if ( angleStartCurrent != angleEndCurrent ) - { - this.drawLines(angleStartCurrent, angleEndCurrent, radiusInner, drawRadial, selected); - } - - var alphaOtherCurrent = this.alphaOther.current(); - var childRadiusInner; - - if ( this == selectedNode || alphaOtherCurrent ) - { - childRadiusInner = - this.children.length ? - this.children[this.children.length - 1].radiusInner.current() * gRadius - : radiusInner - } - - if ( this == selectedNode ) - { - this.drawReferenceRings(childRadiusInner); - } - - if - ( - selected && - ! searchHighlighted && - this != selectedNode && - ( - this.isSearchResult || - this.hideAlone && this.searchResultChildren() || - false -// this.hide && -// this.containsSearchResult - ) - ) - { - context.globalAlpha = this.alphaWedge.current(); - - drawWedge - ( - angleStartCurrent, - angleEndCurrent, - radiusInner, - gRadius, - highlightFill, - 0, - true - ); - - if - ( - this.keyed && - ! showKeys && - this.searchResults && - ! searchHighlighted && - this != highlightedNode && - this != focusNode - ) - { - var angle = (angleEndCurrent + angleStartCurrent) / 2; - this.drawLabel(angle, true, false, true, true); - } - - //this.drawHighlight(false); - searchHighlighted = true; - } - - if - ( - this == selectedNode || -// true - //(canDisplayLabelCurrent) && - this != highlightedNode && - this != focusNode - ) - { - if ( this.radial != this.radialPrev && this.alphaLabel.end == 1 ) - { - context.globalAlpha = tweenFactor; - } - else - { - context.globalAlpha = this.alphaLabel.current(); - } - - this.drawLabel - ( - (angleStartCurrent + angleEndCurrent) / 2, - this.hideAlone && this.searchResultChildren() || - (this.isSearchResult || hiddenSearchResults) && selected, - this == selectedNode && ! this.radial, - selected, - this.radial - ); - - if ( this.radial != this.radialPrev && this.alphaLabel.start == 1 && progress < 1 ) - { - context.globalAlpha = 1 - tweenFactor; - - this.drawLabel - ( - (angleStartCurrent + angleEndCurrent) / 2, - (this.isSearchResult || hiddenSearchResults) && selected, - this == selectedNodeLast && ! this.radialPrev, - selected, - this.radialPrev - ); - } - } - - if - ( - alphaOtherCurrent && - lastChildAngleEnd != null - ) - { - if - ( - (angleEndCurrent - lastChildAngleEnd) * - (childRadiusInner + gRadius) >= - minWidth() - ) - { - //context.font = fontNormal; - context.globalAlpha = this.alphaOther.current(); - - drawTextPolar - ( - this.getUnclassifiedText(), - this.getUnclassifiedPercentage(), - (lastChildAngleEnd + angleEndCurrent) / 2, - (childRadiusInner + gRadius) / 2, - true, - false, - false, - 0, - 0 - ); - } - } - - if ( this == selectedNode && this.keyUnclassified && showKeys ) - { - this.drawKey - ( - (lastChildAngleEnd + angleEndCurrent) / 2, - false, - false - ); - } - } - else - { - var alphaWedgeCurrent = this.alphaWedge.current(); - - if ( alphaWedgeCurrent || this.alphaOther.current() ) - { - var currentR = this.r.current(); - var currentG = this.g.current(); - var currentB = this.b.current(); - - var fill = rgbText(currentR, currentG, currentB); - - var radiusOuter; - var lastChildAngle; - var truncateWedge = - ( - (this.hasChildren() || this == selectedNode ) && - ! this.keyed && - (compress || depth < maxDisplayDepth) && - drawChildren - ); - - if ( truncateWedge ) - { - radiusOuter = this.children.length ? this.children[0].radiusInner.current() * gRadius : radiusInner; - } - else - { - radiusOuter = gRadius; - } - /* - if ( this.hasChildren() ) - { - radiusOuter = this.children[0].getUncollapsed().radiusInner.current() * gRadius + 1; - } - else - { // TEMP - radiusOuter = radiusInner + nodeRadius * gRadius; - - if ( radiusOuter > gRadius ) - { - radiusOuter = gRadius; - } - } - */ - context.globalAlpha = alphaWedgeCurrent; - - if ( radiusInner != radiusOuter || truncateWedge ) - { - drawWedge - ( - angleStartCurrent, - angleEndCurrent, - radiusInner, - radiusOuter,//this.radiusOuter.current() * gRadius, - //'rgba(0, 200, 0, .1)', - fill, - this.alphaPattern.current() - ); - - if ( truncateWedge ) - { - // fill in the extra space if the sum of our childrens' - // magnitudes is less than ours - - if ( lastChildAngleEnd < angleEndCurrent )//&& false) // TEMP - { - if ( radiusOuter > 1 ) - { - // overlap slightly to hide the seam - - // radiusOuter -= 1; - } - - if ( alphaWedgeCurrent < 1 ) - { - context.globalAlpha = this.alphaOther.current(); - drawWedge - ( - lastChildAngleEnd, - angleEndCurrent, - radiusOuter, - gRadius, - colorUnclassified, - 0 - ); - context.globalAlpha = alphaWedgeCurrent; - } - - drawWedge - ( - lastChildAngleEnd, - angleEndCurrent, - radiusOuter, - gRadius,//this.radiusOuter.current() * gRadius, - //'rgba(200, 0, 0, .1)', - fill, - this.alphaPattern.current() - ); - } - } - - if ( radiusOuter < gRadius ) - { - // patch up the seam - // - context.beginPath(); - context.arc(0, 0, radiusOuter, angleStartCurrent/*lastChildAngleEnd*/, angleEndCurrent, false); - context.strokeStyle = fill; - context.lineWidth = 1; - context.stroke(); - } - } - - if ( this.keyed && selected && showKeys )//&& progress == 1 ) - { - this.drawKey - ( - (angleStartCurrent + angleEndCurrent) / 2, - ( - this == highlightedNode || - this == focusNode || - this.searchResults - ), - this == highlightedNode || this == focusNode - ); - } - } - } - } - - this.hiddenLabels = Array(); - - if ( drawChildren ) - { - // draw children - // - for ( var i = 0; i < this.children.length; i++ ) - { - if ( this.drawHiddenChildren(i, selected, labelMode, searchHighlighted) ) - { - i = this.children[i].hiddenEnd; - } - else - { - this.children[i].draw(labelMode, selected, searchHighlighted); - } - } - } - }; - - this.drawHiddenChildren = function - ( - firstHiddenChild, - selected, - labelMode, - searchHighlighted - ) - { - var firstChild = this.children[firstHiddenChild]; - - if ( firstChild.hiddenEnd == null || firstChild.radiusInner.current() == 1 ) - { - return false; - } - - for ( var i = firstHiddenChild; i < firstChild.hiddenEnd; i++ ) - { - if ( ! this.children[i].hide || ! this.children[i].hidePrev && progress < 1 ) - { - return false; - } - } - - var angleStart = firstChild.angleStart.current() + rotationOffset; - var lastChild = this.children[firstChild.hiddenEnd]; - var angleEnd = lastChild.angleEnd.current() + rotationOffset; - var radiusInner = gRadius * firstChild.radiusInner.current(); - var hiddenChildren = firstChild.hiddenEnd - firstHiddenChild + 1; - - if ( labelMode ) - { - var hiddenSearchResults = 0; - - for ( var i = firstHiddenChild; i <= firstChild.hiddenEnd; i++ ) - { - hiddenSearchResults += this.children[i].searchResults; - - if ( this.children[i].magnitude == 0 ) - { - hiddenChildren--; - } - } - - if - ( - selected && - (angleEnd - angleStart) * - (gRadius + gRadius) >= - minWidth() || - this == highlightedNode && - hiddenChildren || - hiddenSearchResults - ) - { - context.globalAlpha = this.alphaWedge.current(); - - this.drawHiddenLabel - ( - angleStart, - angleEnd, - hiddenChildren, - hiddenSearchResults - ); - } - } - - var drawWedges = true; - - for ( var i = firstHiddenChild; i <= firstChild.hiddenEnd; i++ ) - { - // all hidden children must be completely hidden to draw together - - if ( this.children[i].alphaPattern.current() != this.children[i].alphaWedge.current() ) - { - drawWedges = false; - break; - } - } - - if ( labelMode ) - { - if ( drawWedges ) - { - var drawRadial = (angleEnd < this.angleEnd.current() + rotationOffset); - this.drawLines(angleStart, angleEnd, radiusInner, drawRadial); - } - - if ( hiddenSearchResults && ! searchHighlighted ) - { - drawWedge - ( - angleStart, - angleEnd, - radiusInner, - gRadius,//this.radiusOuter.current() * gRadius, - highlightFill, - 0, - true - ); - } - } - else if ( drawWedges ) - { - context.globalAlpha = this.alphaWedge.current(); - - var fill = rgbText - ( - firstChild.r.current(), - firstChild.g.current(), - firstChild.b.current() - ); - - drawWedge - ( - angleStart, - angleEnd, - radiusInner, - gRadius,//this.radiusOuter.current() * gRadius, - fill, - context.globalAlpha, - false - ); - } - - return drawWedges; - } - - this.drawHiddenLabel = function(angleStart, angleEnd, value, hiddenSearchResults) - { - var textAngle = (angleStart + angleEnd) / 2; - var labelRadius = gRadius + fontSize;//(radiusInner + radius) / 2; - - var hiddenLabel = Array(); - - hiddenLabel.value = value; - hiddenLabel.angle = textAngle; - hiddenLabel.search = hiddenSearchResults; - - this.hiddenLabels.push(hiddenLabel); - - drawTick(gRadius - fontSize * .75, fontSize * 1.5, textAngle); - drawTextPolar - ( - value.toString() + ' more', - 0, // inner text - textAngle, - labelRadius, - true, // radial - hiddenSearchResults, // bubble - this == highlightedNode || this == focusNode, // bold - false, - hiddenSearchResults - ); - } - - this.drawHighlight = function(bold) - { - var angleStartCurrent = this.angleStart.current() + rotationOffset; - var angleEndCurrent = this.angleEnd.current() + rotationOffset; - var radiusInner = this.radiusInner.current() * gRadius; - - //this.setHighlightStyle(); - - if ( this == focusNode && this == highlightedNode && this.hasChildren() ) - { -// context.fillStyle = "rgba(255, 255, 255, .3)"; - arrow - ( - angleStartCurrent, - angleEndCurrent, - radiusInner - ); - } - else - { - drawWedge - ( - angleStartCurrent, - angleEndCurrent, - radiusInner, - gRadius, - highlightFill, - 0, - true - ); - } - - // check if hidden children should be highlighted - // - for ( var i = 0; i < this.children.length; i++ ) - { - if - ( - this.children[i].getDepth() - selectedNode.getDepth() + 1 <= - maxDisplayDepth && - this.children[i].hiddenEnd != null - ) - { - var firstChild = this.children[i]; - var lastChild = this.children[firstChild.hiddenEnd]; - var hiddenAngleStart = firstChild.angleStart.current() + rotationOffset; - var hiddenAngleEnd = lastChild.angleEnd.current() + rotationOffset; - var hiddenRadiusInner = gRadius * firstChild.radiusInner.current(); - - drawWedge - ( - hiddenAngleStart, - hiddenAngleEnd, - hiddenRadiusInner, - gRadius, - 'rgba(255, 255, 255, .3)', - 0, - true - ); - - if ( false && ! this.searchResults ) - { - this.drawHiddenLabel - ( - hiddenAngleStart, - hiddenAngleEnd, - firstChild.hiddenEnd - i + 1 - ); - } - - i = firstChild.hiddenEnd; - } - } - -// context.strokeStyle = 'black'; - context.fillStyle = 'black'; - - var highlight = ! ( progress < 1 && zoomOut && this == selectedNodeLast ); - - var angle = (angleEndCurrent + angleStartCurrent) / 2; - - if ( ! (this.keyed && showKeys) ) - { - this.drawLabel(angle, true, bold, true, this.radial); - } - } - - this.drawHighlightCenter = function() - { - if ( ! this.canDisplayHistory() ) - { - return; - } - - context.lineWidth = highlightLineWidth; - context.strokeStyle = 'black'; - context.fillStyle = "rgba(255, 255, 255, .6)"; - - context.fillStyle = 'black'; - this.drawLabel(3 * Math.PI / 2, true, true, false); - context.font = fontNormal; - } - - this.drawKey = function(angle, highlight, bold) - { - var offset = keyOffset(); - var color; - var colorText = this.magnitude == 0 ? 'gray' : 'black'; - var patternAlpha = this.alphaPattern.end; - var boxLeft = imageWidth - keySize - margin; - var textY = offset + keySize / 2; - - var label; - var keyNameWidth; - - if ( this == selectedNode ) - { - color = colorUnclassified; - label = - this.getUnclassifiedText() + - ' ' + - this.getUnclassifiedPercentage(); - keyNameWidth = measureText(label, false); - } - else - { - label = this.keyLabel; - color = rgbText(this.r.end, this.g.end, this.b.end); - - if ( highlight ) - { - if ( this.searchResultChildren() ) - { - label = label + searchResultString(this.searchResultChildren()); - } - - keyNameWidth = measureText(label, bold); - } - else - { - keyNameWidth = this.keyNameWidth; - } - } - - var textLeft = boxLeft - keyBuffer - keyNameWidth - fontSize / 2; - var labelLeft = textLeft; - - if ( labelLeft > keyMinTextLeft - fontSize / 2 ) - { - keyMinTextLeft -= fontSize / 2; - - if ( keyMinTextLeft < centerX - gRadius + fontSize / 2 ) - { - keyMinTextLeft = centerX - gRadius + fontSize / 2; - } - - labelLeft = keyMinTextLeft; - } - - var lineX = new Array(); - var lineY = new Array(); - - var bendRadius; - var keyAngle = Math.atan((textY - centerY) / (labelLeft - centerX)); - var arcAngle; - - if ( keyAngle < 0 ) - { - keyAngle += Math.PI; - } - - if ( keyMinAngle == 0 || angle < keyMinAngle ) - { - keyMinAngle = angle; - } - - if ( angle > Math.PI && keyMinAngle > Math.PI ) - { - // allow lines to come underneath the chart - - angle -= Math.PI * 2; - } - - lineX.push(Math.cos(angle) * gRadius); - lineY.push(Math.sin(angle) * gRadius); - - if ( angle < keyAngle && textY > centerY + Math.sin(angle) * (gRadius + buffer * (currentKey - 1) / (keys + 1) / 2 + buffer / 2) ) - { - bendRadius = gRadius + buffer - buffer * currentKey / (keys + 1) / 2; - } - else - { - bendRadius = gRadius + buffer * currentKey / (keys + 1) / 2 + buffer / 2; - } - - var outside = - Math.sqrt - ( - Math.pow(labelLeft - centerX, 2) + - Math.pow(textY - centerY, 2) - ) > bendRadius; - - if ( ! outside ) - { - arcAngle = Math.asin((textY - centerY) / bendRadius); - - keyMinTextLeft = min(keyMinTextLeft, centerX + bendRadius * Math.cos(arcAngle) - fontSize / 2); - - if ( labelLeft < textLeft && textLeft > centerX + bendRadius * Math.cos(arcAngle) ) - { - lineX.push(textLeft - centerX); - lineY.push(textY - centerY); - } - } - else - { - keyMinTextLeft = min(keyMinTextLeft, labelLeft - fontSize / 2); - - if ( angle < keyAngle ) - { - // flip everything over y = x - // - arcAngle = Math.PI / 2 - keyLineAngle - ( - Math.PI / 2 - angle, - Math.PI / 2 - keyAngle, - bendRadius, - textY - centerY, - labelLeft - centerX, - lineY, - lineX - ); - - } - else - { - arcAngle = keyLineAngle - ( - angle, - keyAngle, - bendRadius, - labelLeft - centerX, - textY - centerY, - lineX, - lineY - ); - } - } - - if ( labelLeft > centerX + bendRadius * Math.cos(arcAngle) || - textY > centerY + bendRadius * Math.sin(arcAngle) + .01) -// if ( outside || ) - { - lineX.push(labelLeft - centerX); - lineY.push(textY - centerY); - - if ( textLeft != labelLeft ) - { - lineX.push(textLeft - centerX); - lineY.push(textY - centerY); - } - } - - context.globalAlpha = this.alphaWedge.current(); - - if ( snapshotMode ) - { - var labelSVG; - - if ( this == selectedNode ) - { - labelSVG = - this.getUnclassifiedText() + - spacer() + - this.getUnclassifiedPercentage(); - } - else - { - labelSVG = this.name + spacer() + this.getPercentage() + '%'; - } - - svg += - '<rect fill="' + color + '" ' + - 'x="' + boxLeft + '" y="' + offset + - '" width="' + keySize + '" height="' + keySize + '"/>'; - - if ( patternAlpha ) - { - svg += - '<rect fill="url(#hiddenPattern)" style="stroke:none" ' + - 'x="' + boxLeft + '" y="' + offset + - '" width="' + keySize + '" height="' + keySize + '"/>'; - } - - svg += - '<path class="line' + - (highlight ? ' highlight' : '') + - '" d="M ' + (lineX[0] + centerX) + ',' + - (lineY[0] + centerY); - - if ( angle != arcAngle ) - { - svg += - ' L ' + (centerX + bendRadius * Math.cos(angle)) + ',' + - (centerY + bendRadius * Math.sin(angle)) + - ' A ' + bendRadius + ',' + bendRadius + ' 0 ' + - '0,' + (angle > arcAngle ? '0' : '1') + ' ' + - (centerX + bendRadius * Math.cos(arcAngle)) + ',' + - (centerY + bendRadius * Math.sin(arcAngle)); - } - - for ( var i = 1; i < lineX.length; i++ ) - { - svg += - ' L ' + (centerX + lineX[i]) + ',' + - (centerY + lineY[i]); - } - - svg += '"/>'; - - if ( highlight ) - { - if ( this.searchResultChildren() ) - { - labelSVG = labelSVG + searchResultString(this.searchResultChildren()); - } - - drawBubbleSVG - ( - boxLeft - keyBuffer - keyNameWidth - fontSize / 2, - textY - fontSize, - keyNameWidth + fontSize, - fontSize * 2, - fontSize, - 0 - ); - - if ( this.isSearchResult ) - { - drawSearchHighlights - ( - label, - boxLeft - keyBuffer - keyNameWidth, - textY, - 0 - ) - } - } - - svg += svgText(labelSVG, boxLeft - keyBuffer, textY, 'end', bold, colorText); - } - else - { - context.fillStyle = color; - context.translate(-centerX, -centerY); - context.strokeStyle = 'black'; - context.globalAlpha = 1;//this.alphaWedge.current(); - - context.fillRect(boxLeft, offset, keySize, keySize); - - if ( patternAlpha ) - { - context.globalAlpha = patternAlpha; - context.fillStyle = hiddenPattern; - - // make clipping box for Firefox performance - context.beginPath(); - context.moveTo(boxLeft, offset); - context.lineTo(boxLeft + keySize, offset); - context.lineTo(boxLeft + keySize, offset + keySize); - context.lineTo(boxLeft, offset + keySize); - context.closePath(); - context.save(); - context.clip(); - - context.fillRect(boxLeft, offset, keySize, keySize); - context.fillRect(boxLeft, offset, keySize, keySize); - - context.restore(); // remove clipping region - } - - if ( highlight ) - { - this.setHighlightStyle(); - context.fillRect(boxLeft, offset, keySize, keySize); - } - else - { - context.lineWidth = thinLineWidth; - } - - context.strokeRect(boxLeft, offset, keySize, keySize); - - if ( lineX.length ) - { - context.beginPath(); - context.moveTo(lineX[0] + centerX, lineY[0] + centerY); - - context.arc(centerX, centerY, bendRadius, angle, arcAngle, angle > arcAngle); - - for ( var i = 1; i < lineX.length; i++ ) - { - context.lineTo(lineX[i] + centerX, lineY[i] + centerY); - } - - context.globalAlpha = this == selectedNode ? - this.children[0].alphaWedge.current() : - this.alphaWedge.current(); - context.lineWidth = highlight ? highlightLineWidth : thinLineWidth; - context.stroke(); - context.globalAlpha = 1; - } - - if ( highlight ) - { - drawBubbleCanvas - ( - boxLeft - keyBuffer - keyNameWidth - fontSize / 2, - textY - fontSize, - keyNameWidth + fontSize, - fontSize * 2, - fontSize, - 0 - ); - - if ( this.isSearchResult ) - { - drawSearchHighlights - ( - label, - boxLeft - keyBuffer - keyNameWidth, - textY, - 0 - ) - } - } - - drawText(label, boxLeft - keyBuffer, offset + keySize / 2, 0, 'end', bold, colorText); - - context.translate(centerX, centerY); - } - - currentKey++; - } - - this.drawLabel = function(angle, bubble, bold, selected, radial) - { - if ( context.globalAlpha == 0 ) - { - return; - } - - var innerText; - var label; - var radius; - - if ( radial ) - { - radius = (this.radiusInner.current() + 1) * gRadius / 2; - } - else - { - radius = this.labelRadius.current() * gRadius; - } - - if ( radial && (selected || bubble ) ) - { - var percentage = this.getPercentage(); - innerText = percentage + '%'; - } - - if - ( - ! radial && - this != selectedNode && - ! bubble && - ( !zoomOut || this != selectedNodeLast) - ) - { - label = this.shortenLabel(); - } - else - { - label = this.name; - } - - var flipped = drawTextPolar - ( - label, - innerText, - angle, - radius, - radial, - bubble, - bold, -// this.isSearchResult && this.shouldAddSearchResultsString() && (!selected || this == selectedNode || highlight), - this.isSearchResult && (!selected || this == selectedNode || bubble), - (this.hideAlone || !selected || this == selectedNode ) ? this.searchResultChildren() : 0 - ); - - var depth = this.getDepth() - selectedNode.getDepth() + 1; - - if - ( - ! radial && - ! bubble && - this != selectedNode && - this.angleEnd.end != this.angleStart.end && - nLabelOffsets[depth - 2] > 2 && - this.labelWidth.current() > (this.angleEnd.end - this.angleStart.end) * Math.abs(radius) && - ! ( zoomOut && this == selectedNodeLast ) && - this.labelRadius.end > 0 - ) - { - // name extends beyond wedge; draw tick mark towards the central - // radius for easier identification - - var radiusCenter = compress ? - (compressedRadii[depth - 1] + compressedRadii[depth - 2]) / 2 : - (depth - .5) * nodeRadius; - - if ( this.labelRadius.end > radiusCenter ) - { - if ( flipped ) - { - drawTick(radius - tickLength * 1.4 , tickLength, angle); - } - else - { - drawTick(radius - tickLength * 1.7, tickLength, angle); - } - } - else - { - if ( flipped ) - { - drawTick(radius + tickLength * .7, tickLength, angle); - } - else - { - drawTick(radius + tickLength * .4, tickLength, angle); - } - } - } - } - - this.drawLines = function(angleStart, angleEnd, radiusInner, drawRadial, selected) - { - if ( snapshotMode ) - { - if ( this != selectedNode) - { - if ( angleEnd == angleStart + Math.PI * 2 ) - { - // fudge to prevent overlap, which causes arc ambiguity - // - angleEnd -= .1 / gRadius; - } - - var longArc = angleEnd - angleStart > Math.PI ? 1 : 0; - - var x1 = centerX + radiusInner * Math.cos(angleStart); - var y1 = centerY + radiusInner * Math.sin(angleStart); - - var x2 = centerX + gRadius * Math.cos(angleStart); - var y2 = centerY + gRadius * Math.sin(angleStart); - - var x3 = centerX + gRadius * Math.cos(angleEnd); - var y3 = centerY + gRadius * Math.sin(angleEnd); - - var x4 = centerX + radiusInner * Math.cos(angleEnd); - var y4 = centerY + radiusInner * Math.sin(angleEnd); - - if ( this.alphaArc.end ) - { - var dArray = - [ - " M ", x4, ",", y4, - " A ", radiusInner, ",", radiusInner, " 0 ", longArc, - " 0 ", x1, ",", y1 - ]; - - svg += '<path class="line" d="' + dArray.join('') + '"/>'; - } - - if ( drawRadial && this.alphaLine.end ) - { - svg += '<line x1="' + x3 + '" y1="' + y3 + '" x2="' + x4 + '" y2="' + y4 + '"/>'; - } - } - } - else - { - context.lineWidth = thinLineWidth; - context.strokeStyle = 'black'; - context.beginPath(); - context.arc(0, 0, radiusInner, angleStart, angleEnd, false); - context.globalAlpha = this.alphaArc.current(); - context.stroke(); - - if ( drawRadial ) - { - var x1 = radiusInner * Math.cos(angleEnd); - var y1 = radiusInner * Math.sin(angleEnd); - var x2 = gRadius * Math.cos(angleEnd); - var y2 = gRadius * Math.sin(angleEnd); - - context.beginPath(); - context.moveTo(x1, y1); - context.lineTo(x2, y2); - -// if ( this.getCollapse() )//( selected && this != selectedNode ) - { - context.globalAlpha = this.alphaLine.current(); - } - - context.stroke(); - } - } - } - - this.drawMap = function(child) - { - if ( this.parent ) - { - this.parent.drawMap(child); - } - - if ( this.getCollapse() && this != child || this == focusNode ) - { - return; - } - - var angleStart = - (child.baseMagnitude - this.baseMagnitude) / this.magnitude * Math.PI * 2 + - rotationOffset; - var angleEnd = - (child.baseMagnitude - this.baseMagnitude + child.magnitude) / - this.magnitude * Math.PI * 2 + - rotationOffset; - - var box = this.getMapPosition(); - - context.save(); - context.fillStyle = 'black'; - context.textAlign = 'end'; - context.textBaseline = 'middle'; - - var textX = box.x - mapRadius - mapBuffer; - var percentage = getPercentage(child.magnitude / this.magnitude); - - var highlight = this == selectedNode || this == highlightedNode; - - if ( highlight ) - { - context.font = fontBold; - } - else - { - context.font = fontNormal; - } - - context.fillText(percentage + '% of', textX, box.y - mapRadius / 3); - context.fillText(this.name, textX, box.y + mapRadius / 3); - - if ( highlight ) - { - context.font = fontNormal; - } - - if ( this == highlightedNode && this != selectedNode ) - { - context.fillStyle = 'rgb(245, 245, 245)'; -// context.fillStyle = 'rgb(200, 200, 200)'; - } - else - { - context.fillStyle = 'rgb(255, 255, 255)'; - } - - context.beginPath(); - context.arc(box.x, box.y, mapRadius, 0, Math.PI * 2, true); - context.closePath(); - context.fill(); - - if ( this == selectedNode ) - { - context.lineWidth = 1; - context.fillStyle = 'rgb(100, 100, 100)'; - } - else - { - if ( this == highlightedNode ) - { - context.lineWidth = .2; - context.fillStyle = 'rgb(190, 190, 190)'; - } - else - { - context.lineWidth = .2; - context.fillStyle = 'rgb(200, 200, 200)'; - } - } - - var maxDepth = this.getMaxDepth(); - - if ( ! compress && maxDepth > maxPossibleDepth + this.getDepth() - 1 ) - { - maxDepth = maxPossibleDepth + this.getDepth() - 1; - } - - if ( this.getDepth() < selectedNode.getDepth() ) - { - if ( child.getDepth() - 1 >= maxDepth ) - { - maxDepth = child.getDepth(); - } - } - - var radiusInner; - - if ( compress ) - { - radiusInner = 0; -// Math.atan(child.getDepth() - this.getDepth()) / -// Math.PI * 2 * .9; - } - else - { - radiusInner = - (child.getDepth() - this.getDepth()) / - (maxDepth - this.getDepth() + 1); - } - - context.stroke(); - context.beginPath(); - - if ( radiusInner == 0 ) - { - context.moveTo(box.x, box.y); - } - else - { - context.arc(box.x, box.y, mapRadius * radiusInner, angleEnd, angleStart, true); - } - - context.arc(box.x, box.y, mapRadius, angleStart, angleEnd, false); - context.closePath(); - context.fill(); - - if ( this == highlightedNode && this != selectedNode ) - { - context.lineWidth = 1; - context.stroke(); - } - - context.restore(); - } - - this.drawReferenceRings = function(childRadiusInner) - { - if ( snapshotMode ) - { - svg += - '<circle cx="' + centerX + '" cy="' + centerY + - '" r="' + childRadiusInner + '"/>'; - svg += - '<circle cx="' + centerX + '" cy="' + centerY + - '" r="' + gRadius + '"/>'; - } - else - { - context.globalAlpha = 1 - this.alphaLine.current();//this.getUncollapsed().alphaLine.current(); - context.beginPath(); - context.arc(0, 0, childRadiusInner, 0, Math.PI * 2, false); - context.stroke(); - context.beginPath(); - context.arc(0, 0, gRadius, 0, Math.PI * 2, false); - context.stroke(); - } - } - - this.getCollapse = function() - { - return ( - collapse && - this.collapse && - this.depth != maxAbsoluteDepth - ); - } - - this.getDepth = function() - { - if ( collapse ) - { - return this.depthCollapsed; - } - else - { - return this.depth; - } - } - - this.getMagnitude = function() - { - return this.attributes[magnitudeIndex][currentDataset]; - } - - this.getMapPosition = function() - { - return { - x : (details.offsetLeft + details.clientWidth - mapRadius), - y : ((focusNode.getDepth() - this.getDepth()) * - (mapBuffer + mapRadius * 2) - mapRadius) + - details.clientHeight + details.offsetTop - }; - } - - this.getMaxDepth = function(limit) - { - var max; - - if ( collapse ) - { - return this.maxDepthCollapsed; - } - else - { - if ( this.maxDepth > maxAbsoluteDepth ) - { - return maxAbsoluteDepth; - } - else - { - return this.maxDepth; - } - } - } - - this.getData = function(index, summary) - { - var files = new Array(); - - if - ( - this.attributes[index] != null && - this.attributes[index][currentDataset] != null && - this.attributes[index][currentDataset] != '' - ) - { - files.push - ( - document.location + - '.files/' + - this.attributes[index][currentDataset] - ); - } - - if ( summary ) - { - for ( var i = 0; i < this.children.length; i++ ) - { - files = files.concat(this.children[i].getData(index, true)); - } - } - - return files; - } - - this.getList = function(index, summary) - { - var list; - - if - ( - this.attributes[index] != null && - this.attributes[index][currentDataset] != null - ) - { - list = this.attributes[index][currentDataset]; - } - else - { - list = new Array(); - } - - if ( summary ) - { - for ( var i = 0; i < this.children.length; i++ ) - { - list = list.concat(this.children[i].getList(index, true)); - } - } - - return list; - } - - this.getParent = function() - { - // returns parent, accounting for collapsing or 0 if doesn't exist - - var parent = this.parent; - - while ( parent != 0 && parent.getCollapse() ) - { - parent = parent.parent; - } - - return parent; - } - - this.getPercentage = function() - { - return getPercentage(this.magnitude / selectedNode.magnitude); - } - - this.getUnclassifiedPercentage = function() - { - if ( this.children.length ) - { - var lastChild = this.children[this.children.length - 1]; - - return getPercentage - ( - ( - this.baseMagnitude + - this.magnitude - - lastChild.magnitude - - lastChild.baseMagnitude - ) / this.magnitude - ) + '%'; - } - else - { - return '100%'; - } - } - - this.getUnclassifiedText = function() - { - return '[other '+ this.name + ']'; - } - - this.getUncollapsed = function() - { - // recurse through collapsed children until uncollapsed node is found - - if ( this.getCollapse() ) - { - return this.children[0].getUncollapsed(); - } - else - { - return this; - } - } - - this.hasChildren = function() - { - return this.children.length && this.depth < maxAbsoluteDepth && this.magnitude; - } - - this.hasParent = function(parent) - { - if ( this.parent ) - { - if ( this.parent == parent ) - { - return true; - } - else - { - return this.parent.hasParent(parent); - } - } - else - { - return false; - } - } - - this.maxVisibleDepth = function(maxDepth) - { - var childInnerRadius; - var depth = this.getDepth() - selectedNode.getDepth() + 1; - var currentMaxDepth = depth; - - if ( this.hasChildren() && depth < maxDepth) - { - var lastChild = this.children[this.children.length - 1]; - - if ( this.name == 'Pseudomonadaceae' ) - { - var x = 3; - } - - if - ( - lastChild.baseMagnitude + lastChild.magnitude < - this.baseMagnitude + this.magnitude - ) - { - currentMaxDepth++; - } - - if ( compress ) - { - childInnerRadius = compressedRadii[depth - 1]; - } - else - { - childInnerRadius = (depth) / maxDepth; - } - - for ( var i = 0; i < this.children.length; i++ ) - { - if - (//true || - this.children[i].magnitude * - angleFactor * - (childInnerRadius + 1) * - gRadius >= - minWidth() - ) - { - var childMaxDepth = this.children[i].maxVisibleDepth(maxDepth); - - if ( childMaxDepth > currentMaxDepth ) - { - currentMaxDepth = childMaxDepth; - } - } - } - } - - return currentMaxDepth; - } - - this.resetLabelWidth = function() - { - var nameWidthOld = this.nameWidth; - - if ( true || ! this.radial )//&& fontSize != fontSizeLast ) - { - var dim = context.measureText(this.name); - this.nameWidth = dim.width; - } - - if ( fontSize != fontSizeLast && this.labelWidth.end == nameWidthOld * labelWidthFudge ) - { - // font size changed; adjust start of tween to match - - this.labelWidth.start = this.nameWidth * labelWidthFudge; - } - else - { - this.labelWidth.start = this.labelWidth.current(); - } - - this.labelWidth.end = this.nameWidth * labelWidthFudge; - } - - this.restrictLabelWidth = function(width) - { - if ( width < this.labelWidth.end ) - { - this.labelWidth.end = width; - } - } - - this.search = function() - { - this.isSearchResult = false; - this.searchResults = 0; - - if - ( - ! this.getCollapse() && - search.value != '' && - this.name.toLowerCase().indexOf(search.value.toLowerCase()) != -1 - ) - { - this.isSearchResult = true; - this.searchResults = 1; - nSearchResults++; - } - - for ( var i = 0; i < this.children.length; i++ ) - { - this.searchResults += this.children[i].search(); - } - - return this.searchResults; - } - - this.searchResultChildren = function() - { - if ( this.isSearchResult ) - { - return this.searchResults - 1; - } - else - { - return this.searchResults; - } - } - - this.setDepth = function(depth, depthCollapsed) - { - this.depth = depth; - this.depthCollapsed = depthCollapsed; - - if - ( - this.children.length == 1 && -// this.magnitude > 0 && - this.children[0].magnitude == this.magnitude && - ( head.children.length > 1 || this.children[0].children.length ) - ) - { - this.collapse = true; - } - else - { - this.collapse = false; - depthCollapsed++; - } - - for ( var i = 0; i < this.children.length; i++ ) - { - this.children[i].setDepth(depth + 1, depthCollapsed); - } - } - - this.setHighlightStyle = function() - { - context.lineWidth = highlightLineWidth; - - if ( this.hasChildren() || this != focusNode || this != highlightedNode ) - { - context.strokeStyle = 'black'; - context.fillStyle = "rgba(255, 255, 255, .3)"; - } - else - { - context.strokeStyle = 'rgb(90,90,90)'; - context.fillStyle = "rgba(155, 155, 155, .3)"; - } - } - - this.setLabelWidth = function(node) - { - if ( ! shorten || this.radial ) - { - return; // don't need to set width - } - - if ( node.hide ) - { - alert('wtf'); - return; - } - - var angle = (this.angleStart.end + this.angleEnd.end) / 2; - var a; // angle difference - - if ( node == selectedNode ) - { - a = Math.abs(angle - node.angleOther); - } - else - { - a = Math.abs(angle - (node.angleStart.end + node.angleEnd.end) / 2); - } - - if ( a == 0 ) - { - return; - } - - if ( a > Math.PI ) - { - a = 2 * Math.PI - a; - } - - if ( node.radial || node == selectedNode ) - { - var nodeLabelRadius; - - if ( node == selectedNode ) - { - // radial 'other' label - - nodeLabelRadius = (node.children[0].radiusInner.end + 1) / 2; - } - else - { - nodeLabelRadius = (node.radiusInner.end + 1) / 2; - } - - if ( a < Math.PI / 2 ) - { - var r = this.labelRadius.end * gRadius + .5 * fontSize - var hypotenuse = r / Math.cos(a); - var opposite = r * Math.tan(a); - var fontRadius = .8 * fontSize; - - if - ( - nodeLabelRadius * gRadius < hypotenuse && - this.labelWidth.end / 2 + fontRadius > opposite - ) - { - this.labelWidth.end = 2 * (opposite - fontRadius); - } - } - } - else if - ( - this.labelRadius.end == node.labelRadius.end && - a < Math.PI / 4 - ) - { - // same radius with small angle; use circumferential approximation - - var dist = a * this.labelRadius.end * gRadius - fontSize * (1 - a * 4 / Math.PI) * 1.3; - - if ( this.labelWidth.end < dist ) - { - node.restrictLabelWidth((dist - this.labelWidth.end / 2) * 2); - } - else if ( node.labelWidth.end < dist ) - { - this.restrictLabelWidth((dist - node.labelWidth.end / 2) * 2); - } - else - { - // both labels reach halfway point; restrict both - - this.labelWidth.end = dist; - node.labelWidth.end = dist - } - } - else - { - var r1 = this.labelRadius.end * gRadius; - var r2 = node.labelRadius.end * gRadius; - - // first adjust the radii to account for the height of the font by shifting them - // toward each other - // - var fontFudge = .35 * fontSize; - // - if ( this.labelRadius.end < node.labelRadius.end ) - { - r1 += fontFudge; - r2 -= fontFudge; - } - else if ( this.labelRadius.end > node.labelRadius.end ) - { - r1 -= fontFudge; - r2 += fontFudge; - } - else - { - r1 -= fontFudge; - r2 -= fontFudge; - } - - var r1s = r1 * r1; - var r2s = r2 * r2; - - // distance between the centers of the two labels - // - var dist = Math.sqrt(r1s + r2s - 2 * r1 * r2 * Math.cos(a)); - - // angle at our label center between our radius and the line to the other label center - // - var b = Math.acos((r1s + dist * dist - r2s) / (2 * r1 * dist)); - - // distance from our label center to the intersection of the two tangents - // - var l1 = Math.sin(a + b - Math.PI / 2) * dist / Math.sin(Math.PI - a); - - // distance from other label center the the intersection of the two tangents - // - var l2 = Math.sin(Math.PI / 2 - b) * dist / Math.sin(Math.PI - a); - - l1 = Math.abs(l1) - .4 * fontSize; - l2 = Math.abs(l2) - .4 * fontSize; -/* - // amount to shorten the distances because of the height of the font - // - var l3 = 0; - var fontRadius = fontSize * .55; - // - if ( l1 < 0 || l2 < 0 ) - { - var l4 = fontRadius / Math.tan(a); - l1 = Math.abs(l1); - l2 = Math.abs(l2); - - l1 -= l4; - l2 -= l4; - } - else - { - var c = Math.PI - a; - - l3 = fontRadius * Math.tan(c / 2); - } -*/ - if ( this.labelWidth.end / 2 > l1 && node.labelWidth.end / 2 > l2 ) - { - // shorten the farthest one from the intersection - - if ( l1 > l2 ) - { - this.restrictLabelWidth(2 * (l1));// - l3 - fontRadius)); - } - else - { - node.restrictLabelWidth(2 * (l2));// - l3 - fontRadius)); - } - }/* - else if ( this.labelWidth.end / 2 > l1 + l3 && node.labelWidth.end / 2 > l2 - l3 ) - { - node.restrictLabelWidth(2 * (l2 - l3)); - } - else if ( this.labelWidth.end / 2 > l1 - l3 && node.labelWidth.end / 2 > l2 + l3 ) - { - this.restrictLabelWidth(2 * (l1 - l3)); - }*/ - } - } - - this.setMagnitudes = function(baseMagnitude) - { - this.magnitude = this.getMagnitude(); - this.baseMagnitude = baseMagnitude; - - for ( var i = 0; i < this.children.length; i++ ) - { - this.children[i].setMagnitudes(baseMagnitude); - baseMagnitude += this.children[i].magnitude; - } - - this.maxChildMagnitude = baseMagnitude; - } - - this.setMaxDepths = function() - { - this.maxDepth = this.depth; - this.maxDepthCollapsed = this.depthCollapsed; - - for ( i in this.children ) - { - var child = this.children[i]; - - child.setMaxDepths(); - - if ( child.maxDepth > this.maxDepth ) - { - this.maxDepth = child.maxDepth; - } - - if - ( - child.maxDepthCollapsed > this.maxDepthCollapsed && - (child.depth <= maxAbsoluteDepth || maxAbsoluteDepth == 0) - ) - { - this.maxDepthCollapsed = child.maxDepthCollapsed; - } - } - } - - this.setTargetLabelRadius = function() - { - var depth = this.getDepth() - selectedNode.getDepth() + 1; - var index = depth - 2; - var labelOffset = labelOffsets[index]; - - if ( this.radial ) - { - //this.labelRadius.setTarget((this.radiusInner.end + 1) / 2); - var max = - depth == maxDisplayDepth ? - 1 : - compressedRadii[index + 1]; - - this.labelRadius.setTarget((compressedRadii[index] + max) / 2); - } - else - { - var radiusCenter; - var width; - - if ( compress ) - { - if ( nLabelOffsets[index] > 1 ) - { - this.labelRadius.setTarget - ( - lerp - ( - labelOffset + .75, - 0, - nLabelOffsets[index] + .5, - compressedRadii[index], - compressedRadii[index + 1] - ) - ); - } - else - { - this.labelRadius.setTarget((compressedRadii[index] + compressedRadii[index + 1]) / 2); - } - } - else - { - radiusCenter = - nodeRadius * (depth - 1) + - nodeRadius / 2; - width = nodeRadius; - - this.labelRadius.setTarget - ( - radiusCenter + width * ((labelOffset + 1) / (nLabelOffsets[index] + 1) - .5) - ); - } - } - - if ( ! this.hide && ! this.keyed && nLabelOffsets[index] ) - { - // check last and first labels in each track for overlap - - for ( var i = 0; i < maxDisplayDepth - 1; i++ ) - { - for ( var j = 0; j <= nLabelOffsets[i]; j++ ) - { - var last = labelLastNodes[i][j]; - var first = labelFirstNodes[i][j]; - - if ( last ) - { - if ( j == nLabelOffsets[i] ) - { - // last is radial - this.setLabelWidth(last); - } - else - { - last.setLabelWidth(this); - } - } - - if ( first ) - { - if ( j == nLabelOffsets[i] ) - { - this.setLabelWidth(first); - } - else - { - first.setLabelWidth(this); - } - } - } - } - - if ( selectedNode.canDisplayLabelOther ) - { - this.setLabelWidth(selectedNode); // in case there is an 'other' label - } - - if ( this.radial ) - { - // use the last 'track' of this depth for radial - - labelLastNodes[index][nLabelOffsets[index]] = this; - - if ( labelFirstNodes[index][nLabelOffsets[index]] == 0 ) - { - labelFirstNodes[index][nLabelOffsets[index]] = this; - } - } - else - { - labelLastNodes[index][labelOffset] = this; - - // update offset - - labelOffsets[index] += 1; - - if ( labelOffsets[index] > nLabelOffsets[index] ) - { - labelOffsets[index] -= nLabelOffsets[index]; - - if ( !(nLabelOffsets[index] & 1) ) - { - labelOffsets[index]--; - } - } - else if ( labelOffsets[index] == nLabelOffsets[index] ) - { - labelOffsets[index] -= nLabelOffsets[index]; - - if ( false && !(nLabelOffsets[index] & 1) ) - { - labelOffsets[index]++; - } - } - - if ( labelFirstNodes[index][labelOffset] == 0 ) - { - labelFirstNodes[index][labelOffset] = this; - } - } - } - else if ( this.hide ) - { - this.labelWidth.end = 0; - } - } - - this.setTargets = function() - { - if ( this == selectedNode ) - { - this.setTargetsSelected - ( - 0, - 1, - lightnessBase, - false, - false - ); - return; - } - - var depthRelative = this.getDepth() - selectedNode.getDepth(); - - var parentOfSelected = selectedNode.hasParent(this); -/* ( -// ! this.getCollapse() && - this.baseMagnitude <= selectedNode.baseMagnitude && - this.baseMagnitude + this.magnitude >= - selectedNode.baseMagnitude + selectedNode.magnitude - ); -*/ - if ( parentOfSelected ) - { - this.resetLabelWidth(); - } - else - { - //context.font = fontNormal; - var dim = context.measureText(this.name); - this.nameWidth = dim.width; - //this.labelWidth.setTarget(this.labelWidth.end); - this.labelWidth.setTarget(0); - } - - // set angles - // - if ( this.baseMagnitude <= selectedNode.baseMagnitude ) - { - this.angleStart.setTarget(0); - } - else - { - this.angleStart.setTarget(Math.PI * 2); - } - // - if - ( - parentOfSelected || - this.baseMagnitude + this.magnitude >= - selectedNode.baseMagnitude + selectedNode.magnitude - ) - { - this.angleEnd.setTarget(Math.PI * 2); - } - else - { - this.angleEnd.setTarget(0); - } - - // children - // - for ( var i = 0; i < this.children.length; i++ ) - { - this.children[i].setTargets(); - } - - if ( this.getDepth() <= selectedNode.getDepth() ) - { - // collapse in - - this.radiusInner.setTarget(0); - - if ( parentOfSelected ) - { - this.labelRadius.setTarget - ( - (depthRelative) * - historySpacingFactor * fontSize / gRadius - ); - //this.scale.setTarget(1 - (selectedNode.getDepth() - this.getDepth()) / 18); // TEMP - } - else - { - this.labelRadius.setTarget(0); - //this.scale.setTarget(1); // TEMP - } - } - else if ( depthRelative + 1 > maxDisplayDepth ) - { - // collapse out - - this.radiusInner.setTarget(1); - this.labelRadius.setTarget(1); - //this.scale.setTarget(1); // TEMP - } - else - { - // don't collapse - - if ( compress ) - { - this.radiusInner.setTarget(compressedRadii[depthRelative - 1]); - } - else - { - this.radiusInner.setTarget(nodeRadius * (depthRelative)); - } - - //this.scale.setTarget(1); // TEMP - - if ( this == selectedNode ) - { - this.labelRadius.setTarget(0); - } - else - { - if ( compress ) - { - this.labelRadius.setTarget - ( - (compressedRadii[depthRelative - 1] + compressedRadii[depthRelative]) / 2 - ); - } - else - { - this.labelRadius.setTarget(nodeRadius * (depthRelative) + nodeRadius / 2); - } - } - } - -// this.r.start = this.r.end; -// this.g.start = this.g.end; -// this.b.start = this.b.end; - - this.r.setTarget(255); - this.g.setTarget(255); - this.b.setTarget(255); - - this.alphaLine.setTarget(0); - this.alphaArc.setTarget(0); - this.alphaWedge.setTarget(0); - this.alphaPattern.setTarget(0); - this.alphaOther.setTarget(0); - - if ( parentOfSelected && ! this.getCollapse() ) - { - var alpha = - ( - 1 - - (selectedNode.getDepth() - this.getDepth()) / - (Math.floor((compress ? compressedRadii[0] : nodeRadius) * gRadius / (historySpacingFactor * fontSize) - .5) + 1) - ); - - if ( alpha < 0 ) - { - alpha = 0; - } - - this.alphaLabel.setTarget(alpha); - this.radial = false; - } - else - { - this.alphaLabel.setTarget(0); - } - - this.hideAlonePrev = this.hideAlone; - this.hidePrev = this.hide; - - if ( parentOfSelected ) - { - this.hideAlone = false; - this.hide = false; - } - - if ( this.getParent() == selectedNode.getParent() ) - { - this.hiddenEnd = null; - } - - this.radialPrev = this.radial; - } - - this.setTargetsSelected = function(hueMin, hueMax, lightness, hide, nextSiblingHidden) - { - var collapse = this.getCollapse(); - var depth = this.getDepth() - selectedNode.getDepth() + 1; - var canDisplayChildLabels = false; - var lastChild; - - if ( this.hasChildren() )//&& ! hide ) - { - lastChild = this.children[this.children.length - 1]; - this.hideAlone = true; - } - else - { - this.hideAlone = false; - } - - // set child wedges - // - for ( var i = 0; i < this.children.length; i++ ) - { - this.children[i].setTargetWedge(); - - if - ( - ! this.children[i].hide && - ( collapse || depth < maxDisplayDepth ) && - this.depth < maxAbsoluteDepth - ) - { - canDisplayChildLabels = true; - this.hideAlone = false; - } - } - - if ( this == selectedNode || lastChild && lastChild.angleEnd.end < this.angleEnd.end - .01) - { - this.hideAlone = false; - } - - if ( this.hideAlonePrev == undefined ) - { - this.hideAlonePrev = this.hideAlone; - } - - if ( this == selectedNode ) - { - var otherArc = - this.children.length ? - angleFactor * - ( - this.baseMagnitude + this.magnitude - - lastChild.baseMagnitude - lastChild.magnitude - ) - : this.baseMagnitude + this.magnitude; - this.canDisplayLabelOther = - this.children.length ? - otherArc * - (this.children[0].radiusInner.end + 1) * gRadius >= - minWidth() - : true; - - this.keyUnclassified = false; - - if ( this.canDisplayLabelOther ) - { - this.angleOther = Math.PI * 2 - otherArc / 2; - } - else if ( otherArc > 0.0000000001 ) - { - this.keyUnclassified = true; - keys++; - } - - this.angleStart.setTarget(0); - this.angleEnd.setTarget(Math.PI * 2); - - if ( this.children.length ) - { - this.radiusInner.setTarget(0); - } - else - { - this.radiusInner.setTarget(compressedRadii[0]); - } - - this.hidePrev = this.hide; - this.hide = false; - this.hideAlonePrev = this.hideAlone; - this.hideAlone = false; - this.keyed = false; - } - - if ( hueMax - hueMin > 1 / 12 ) - { - hueMax = hueMin + 1 / 12; - } - - // set lightness - // - if ( ! ( hide || this.hideAlone ) ) - { - if ( useHue() ) - { - lightness = (lightnessBase + lightnessMax) / 2; - } - else - { - lightness = lightnessBase + (depth - 1) * lightnessFactor; - - if ( lightness > lightnessMax ) - { - lightness = lightnessMax; - } - } - } - - if ( hide ) - { - this.hide = true; - } - - if ( this.hidePrev == undefined ) - { - this.hidePrev = this.hide; - } - - var hiddenStart = -1; - var hiddenHueNumer = 0; - var hiddenHueDenom = 0; - var i = 0; - - if ( ! this.hide ) - { - this.hiddenEnd = null; - } - - while ( true ) - { - if ( ! this.hideAlone && ! hide && ( i == this.children.length || ! this.children[i].hide ) ) - { - // reached a non-hidden child or the end; set targets for - // previous group of hidden children (if any) using their - // average hue - - if ( hiddenStart != -1 ) - { - var hiddenHue = hiddenHueDenom ? hiddenHueNumer / hiddenHueDenom : hueMin; - - for ( var j = hiddenStart; j < i; j++ ) - { - this.children[j].setTargetsSelected - ( - hiddenHue, - null, - lightness, - false, - j < i - 1 - ); - - this.children[j].hiddenEnd = null; - } - - this.children[hiddenStart].hiddenEnd = i - 1; - } - } - - if ( i == this.children.length ) - { - break; - } - - var child = this.children[i]; - var childHueMin; - var childHueMax; - - if ( this.magnitude > 0 && ! this.hide && ! this.hideAlone ) - { - if ( useHue() ) - { - childHueMin = child.hues[currentDataset]; - } - else if ( this == selectedNode ) - { - var min = 0.0; - var max = 1.0; - - if ( this.children.length > 6 ) - { - childHueMin = lerp((1 - Math.pow(1 - i / this.children.length, 1.4)) * .95, 0, 1, min, max); - childHueMax = lerp((1 - Math.pow(1 - (i + .55) / this.children.length, 1.4)) * .95, 0, 1, min, max); - } - else - { - childHueMin = lerp(i / this.children.length, 0, 1, min, max); - childHueMax = lerp((i + .55) / this.children.length, 0, 1, min, max); - } - } - else - { - childHueMin = lerp - ( - child.baseMagnitude, - this.baseMagnitude, - this.baseMagnitude + this.magnitude, - hueMin, - hueMax - ); - childHueMax = lerp - ( - child.baseMagnitude + child.magnitude * .99, - this.baseMagnitude, - this.baseMagnitude + this.magnitude, - hueMin, - hueMax - ); - } - } - else - { - childHueMin = hueMin; - childHueMax = hueMax; - } - - if ( ! this.hideAlone && ! hide && ! this.hide && child.hide ) - { - if ( hiddenStart == -1 ) - { - hiddenStart = i; - } - - if ( useHue() ) - { - hiddenHueNumer += childHueMin * child.magnitude; - hiddenHueDenom += child.magnitude; - } - else - { - hiddenHueNumer += childHueMin; - hiddenHueDenom++; - } - } - else - { - hiddenStart = -1; - - this.children[i].setTargetsSelected - ( - childHueMin, - childHueMax, - lightness, - hide || this.keyed || this.hideAlone || this.hide && ! collapse, - false - ); - } - - i++; - } - - if ( this.hue && this.magnitude ) - { - this.hue.setTarget(this.hues[currentDataset]); - - if ( this.attributes[magnitudeIndex][lastDataset] == 0 ) - { - this.hue.start = this.hue.end; - } - } - - this.radialPrev = this.radial; - - if ( this == selectedNode ) - { - this.resetLabelWidth(); - this.labelWidth.setTarget(this.nameWidth * labelWidthFudge); - this.alphaWedge.setTarget(0); - this.alphaLabel.setTarget(1); - this.alphaOther.setTarget(1); - this.alphaArc.setTarget(0); - this.alphaLine.setTarget(0); - this.alphaPattern.setTarget(0); - this.r.setTarget(255); - this.g.setTarget(255); - this.b.setTarget(255); - this.radial = false; - this.labelRadius.setTarget(0); - } - else - { - var rgb = hslToRgb - ( - hueMin, - saturation, - lightness - ); - - this.r.setTarget(rgb.r); - this.g.setTarget(rgb.g); - this.b.setTarget(rgb.b); - this.alphaOther.setTarget(0); - - this.alphaWedge.setTarget(1); - - if ( this.hide || this.hideAlone ) - { - this.alphaPattern.setTarget(1); - } - else - { - this.alphaPattern.setTarget(0); - } - - // set radial - // - if ( ! ( hide || this.hide ) )//&& ! this.keyed ) - { - if ( this.hideAlone ) - { - this.radial = true; - } - else if ( false && canDisplayChildLabels ) - { - this.radial = false; - } - else - { - this.radial = true; - - if ( this.hasChildren() && depth < maxDisplayDepth ) - { - var lastChild = this.children[this.children.length - 1]; - - if - ( - lastChild.angleEnd.end == this.angleEnd.end || - ( - (this.angleStart.end + this.angleEnd.end) / 2 - - lastChild.angleEnd.end - ) * (this.radiusInner.end + 1) * gRadius * 2 < - minWidth() - ) - { - this.radial = false; - } - } - } - } - - // set alphaLabel - // - if - ( - collapse || - hide || - this.hide || - this.keyed || - depth > maxDisplayDepth || - ! this.canDisplayDepth() - ) - { - this.alphaLabel.setTarget(0); - } - else - { - if - ( - (this.radial || nLabelOffsets[depth - 2]) - ) - { - this.alphaLabel.setTarget(1); - } - else - { - this.alphaLabel.setTarget(0); - - if ( this.radialPrev ) - { - this.alphaLabel.start = 0; - } - } - } - - // set alphaArc - // - if - ( - collapse || - hide || - depth > maxDisplayDepth || - ! this.canDisplayDepth() - ) - { - this.alphaArc.setTarget(0); - } - else - { - this.alphaArc.setTarget(1); - } - - // set alphaLine - // - if - ( - hide || - this.hide && nextSiblingHidden || - depth > maxDisplayDepth || - ! this.canDisplayDepth() - ) - { - this.alphaLine.setTarget(0); - } - else - { - this.alphaLine.setTarget(1); - } - - //if ( ! this.radial ) - { - this.resetLabelWidth(); - } - - // set labelRadius target - // - if ( collapse ) - { - this.labelRadius.setTarget(this.radiusInner.end); - } - else - { - if ( depth > maxDisplayDepth || ! this.canDisplayDepth() ) - { - this.labelRadius.setTarget(1); - } - else - { - this.setTargetLabelRadius(); - } - } - } - } - - this.setTargetWedge = function() - { - var depth = this.getDepth() - selectedNode.getDepth() + 1; - - // set angles - // - var baseMagnitudeRelative = this.baseMagnitude - selectedNode.baseMagnitude; - // - this.angleStart.setTarget(baseMagnitudeRelative * angleFactor); - this.angleEnd.setTarget((baseMagnitudeRelative + this.magnitude) * angleFactor); - - // set radiusInner - // - if ( depth > maxDisplayDepth || ! this.canDisplayDepth() ) - { - this.radiusInner.setTarget(1); - } - else - { - if ( compress ) - { - this.radiusInner.setTarget(compressedRadii[depth - 2]); - } - else - { - this.radiusInner.setTarget(nodeRadius * (depth - 1)); - } - } - - if ( this.hide != undefined ) - { - this.hidePrev = this.hide; - } - - if ( this.hideAlone != undefined ) - { - this.hideAlonePrev = this.hideAlone; - } - - // set hide - // - if - ( - (this.angleEnd.end - this.angleStart.end) * - (this.radiusInner.end * gRadius + gRadius) < - minWidth() - ) - { - if ( depth == 2 && ! this.getCollapse() && this.depth <= maxAbsoluteDepth ) - { - this.keyed = true; - keys++; - this.hide = false; - - var percentage = this.getPercentage(); - this.keyLabel = this.name + ' ' + percentage + '%'; - var dim = context.measureText(this.keyLabel); - this.keyNameWidth = dim.width; - } - else - { - this.keyed = false; - this.hide = depth > 2; - } - } - else - { - this.keyed = false; - this.hide = false; - } - } - - this.shortenLabel = function() - { - var label = this.name; - - var labelWidth = this.nameWidth; - var maxWidth = this.labelWidth.current(); - var minEndLength = 0; - - if ( labelWidth > maxWidth && label.length > minEndLength * 2 ) - { - var endLength = - Math.floor((label.length - 1) * maxWidth / labelWidth / 2); - - if ( endLength < minEndLength ) - { - endLength = minEndLength; - } - - return ( - label.substring(0, endLength) + - '...' + - label.substring(label.length - endLength)); - } - else - { - return label; - } - } - -/* this.shouldAddSearchResultsString = function() - { - if ( this.isSearchResult ) - { - return this.searchResults > 1; - } - else - { - return this.searchResults > 0; - } - } -*/ - this.sort = function() - { - this.children.sort(function(a, b){return b.getMagnitude() - a.getMagnitude()}); - - for (var i = 0; i < this.children.length; i++) - { - this.children[i].sort(); - } - } -} - -var options; - -function addOptionElement(position, innerHTML, title) -{ - var div = document.createElement("div"); -// div.style.position = 'absolute'; -// div.style.top = position + 'px'; - div.innerHTML = innerHTML; -// div.style.display = 'block'; - div.style.padding = '2px'; - - if ( title ) - { - div.title = title; - } - - options.appendChild(div); - var height = 0;//div.clientHeight; - return position + height; -} - -function addOptionElements(hueName, hueDefault) -{ - options = document.createElement('div'); - options.style.position = 'absolute'; - options.style.top = '0px'; - options.addEventListener('mousedown', function(e) {mouseClick(e)}, false); -// options.onmouseup = function(e) {mouseUp(e)} - document.body.appendChild(options); - - document.body.style.font = '11px sans-serif'; - var position = 5; - - details = document.createElement('div'); - details.style.position = 'absolute'; - details.style.top = '1%'; - details.style.right = '2%'; - details.style.textAlign = 'right'; - document.body.insertBefore(details, canvas); -// <div id="details" style="position:absolute;top:1%;right:2%;text-align:right;"> - - details.innerHTML = '\ -<span id="detailsName" style="font-weight:bold"></span> \ -<input type="button" id="detailsExpand" onclick="expand(focusNode);"\ -value="↔" title="Expand this wedge to become the new focus of the chart"/><br/>\ -<div id="detailsInfo" style="float:right"></div>'; - - keyControl = document.createElement('input'); - keyControl.type = 'button'; - keyControl.value = showKeys ? 'x' : '…'; - keyControl.style.position = ''; - keyControl.style.position = 'fixed'; - keyControl.style.visibility = 'hidden'; - - document.body.insertBefore(keyControl, canvas); - - var logoElement = document.getElementById('logo'); - - if ( logoElement ) - { - logoImage = logoElement.src; - } - else - { - logoImage = 'http://marbl.github.io/Krona/img/logo-med.png'; - } - -// document.getElementById('options').style.fontSize = '9pt'; - position = addOptionElement - ( - position, -'<a style="margin:2px" target="_blank" href="https://github.com/marbl/Krona/wiki"><img style="vertical-align:middle;width:108px;height:30px;" src="' + logoImage + '" alt="Logo of Krona"/></a><input type="button" id="back" value="←" title="Go back (Shortcut: ←)"/>\ -<input type="button" id="forward" value="→" title="Go forward (Shortcut: →)"/> \ - Search: <input type="text" id="search"/>\ -<input id="searchClear" type="button" value="x" onclick="clearSearch()"/> \ -<span id="searchResults"></span>' - ); - - if ( datasets > 1 ) - { - var size = datasets < datasetSelectSize ? datasets : datasetSelectSize; - - var select = - '<table style="border-collapse:collapse;padding:0px"><tr><td style="padding:0px">' + - '<select id="datasets" style="min-width:100px" size="' + size + '" onchange="onDatasetChange()">'; - - for ( var i = 0; i < datasetNames.length; i++ ) - { - select += '<option>' + datasetNames[i] + '</option>'; - } - - select += - '</select></td><td style="vertical-align:top;padding:1px;">' + - '<input style="display:block" title="Previous dataset (Shortcut: ↑)" id="prevDataset" type="button" value="↑" onclick="prevDataset()" disabled="true"/>' + - '<input title="Next dataset (Shortcut: ↓)" id="nextDataset" type="button" value="↓" onclick="nextDataset()"/><br/></td>' + - '<td style="padding-top:1px;vertical-align:top"><input title="Switch to the last dataset that was viewed (Shortcut: TAB)" id="lastDataset" type="button" style="font:11px Times new roman" value="last" onclick="selectLastDataset()"/></td></tr></table>'; - - position = addOptionElement(position + 5, select); - - datasetDropDown = document.getElementById('datasets'); - datasetButtonLast = document.getElementById('lastDataset'); - datasetButtonPrev = document.getElementById('prevDataset'); - datasetButtonNext = document.getElementById('nextDataset'); - - position += datasetDropDown.clientHeight; - } - - position = addOptionElement - ( - position + 5, -'<input type="button" id="maxAbsoluteDepthDecrease" value="-"/>\ -<span id="maxAbsoluteDepth"></span>\ - <input type="button" id="maxAbsoluteDepthIncrease" value="+"/> Max depth', -'Maximum depth to display, counted from the top level \ -and including collapsed wedges.' - ); - - position = addOptionElement - ( - position, -'<input type="button" id="fontSizeDecrease" value="-"/>\ -<span id="fontSize"></span>\ - <input type="button" id="fontSizeIncrease" value="+"/> Font size' - ); - - position = addOptionElement - ( - position, -'<input type="button" id="radiusDecrease" value="-"/>\ -<input type="button" id="radiusIncrease" value="+"/> Chart size' - ); - - if ( hueName ) - { - hueDisplayName = attributes[attributeIndex(hueName)].displayName; - - position = addOptionElement - ( - position + 5, - '<input type="checkbox" id="useHue" style="float:left" ' + - '/><div>Color by<br/>' + hueDisplayName + - '</div>' - ); - - useHueCheckBox = document.getElementById('useHue'); - useHueCheckBox.checked = hueDefault; - useHueCheckBox.onclick = handleResize; - useHueCheckBox.onmousedown = suppressEvent; - } - /* - position = addOptionElement - ( - position + 5, - ' <input type="checkbox" id="shorten" checked="checked" />Shorten labels</div>', - 'Prevent labels from overlapping by shortening them' - ); - - position = addOptionElement - ( - position, - ' <input type="checkbox" id="compress" checked="checked" />Compress', - 'Compress wedges if needed to show the entire depth' - ); - */ - position = addOptionElement - ( - position, - '<input type="checkbox" id="collapse" checked="checked" />Collapse', - 'Collapse wedges that are redundant (entirely composed of another wedge)' - ); - - position = addOptionElement - ( - position + 5, - '<input type="button" id="snapshot" value="Snapshot"/>', -'Render the current view as SVG (Scalable Vector Graphics), a publication-\ -quality format that can be printed and saved (see Help for browser compatibility)' - ); - - position = addOptionElement - ( - position + 5, -'<input type="button" id="linkButton" value="Link"/>\ -<input type="text" size="30" id="linkText"/>', -'Show a link to this view that can be copied for bookmarking or sharing' - ); - - position = addOptionElement - ( - position + 5, -'<input type="button" id="help" value="?"\ -onclick="window.open(\'https://github.com/marbl/Krona/wiki/Browsing%20Krona%20charts\', \'help\')"/>', -'Help' - ); -} - -function arrow(angleStart, angleEnd, radiusInner) -{ - if ( context.globalAlpha == 0 ) - { - return; - } - - var angleCenter = (angleStart + angleEnd) / 2; - var radiusArrowInner = radiusInner - gRadius / 10;//nodeRadius * gRadius; - var radiusArrowOuter = gRadius * 1.1;//(1 + nodeRadius); - var radiusArrowCenter = (radiusArrowInner + radiusArrowOuter) / 2; - var pointLength = (radiusArrowOuter - radiusArrowInner) / 5; - - context.fillStyle = highlightFill; - context.lineWidth = highlightLineWidth; - - // First, mask out the first half of the arrow. This will prevent the tips - // from superimposing if the arrow goes most of the way around the circle. - // Masking is done by setting the clipping region to the inverse of the - // half-arrow, which is defined by cutting the half-arrow out of a large - // rectangle - // - context.beginPath(); - context.arc(0, 0, radiusInner, angleCenter, angleEnd, false); - context.lineTo - ( - radiusArrowInner * Math.cos(angleEnd), - radiusArrowInner * Math.sin(angleEnd) - ); - context.lineTo - ( - radiusArrowCenter * Math.cos(angleEnd) - pointLength * Math.sin(angleEnd), - radiusArrowCenter * Math.sin(angleEnd) + pointLength * Math.cos(angleEnd) - ); - context.lineTo - ( - radiusArrowOuter * Math.cos(angleEnd), - radiusArrowOuter * Math.sin(angleEnd) - ); - context.arc(0, 0, gRadius, angleEnd, angleCenter, true); - context.closePath(); - context.moveTo(-imageWidth, -imageHeight); - context.lineTo(imageWidth, -imageHeight); - context.lineTo(imageWidth, imageHeight); - context.lineTo(-imageWidth, imageHeight); - context.closePath(); - context.save(); - context.clip(); - - // Next, draw the other half-arrow with the first half masked out - // - context.beginPath(); - context.arc(0, 0, radiusInner, angleCenter, angleStart, true); - context.lineTo - ( - radiusArrowInner * Math.cos(angleStart), - radiusArrowInner * Math.sin(angleStart) - ); - context.lineTo - ( - radiusArrowCenter * Math.cos(angleStart) + pointLength * Math.sin(angleStart), - radiusArrowCenter * Math.sin(angleStart) - pointLength * Math.cos(angleStart) - ); - context.lineTo - ( - radiusArrowOuter * Math.cos(angleStart), - radiusArrowOuter * Math.sin(angleStart) - ); - context.arc(0, 0, gRadius, angleStart, angleCenter, false); - context.fill(); - context.stroke(); - - // Finally, remove the clipping region and draw the first half-arrow. This - // half is extended slightly to fill the seam. - // - context.restore(); - context.beginPath(); - context.arc(0, 0, radiusInner, angleCenter - 2 / (2 * Math.PI * radiusInner), angleEnd, false); - context.lineTo - ( - radiusArrowInner * Math.cos(angleEnd), - radiusArrowInner * Math.sin(angleEnd) - ); - context.lineTo - ( - radiusArrowCenter * Math.cos(angleEnd) - pointLength * Math.sin(angleEnd), - radiusArrowCenter * Math.sin(angleEnd) + pointLength * Math.cos(angleEnd) - ); - context.lineTo - ( - radiusArrowOuter * Math.cos(angleEnd), - radiusArrowOuter * Math.sin(angleEnd) - ); - context.arc(0, 0, gRadius, angleEnd, angleCenter - 2 / (2 * Math.PI * gRadius), true); - context.fill(); - context.stroke(); -} - -function attributeIndex(aname) -{ - for ( var i = 0 ; i < attributes.length; i++ ) - { - if ( aname == attributes[i].name ) - { - return i; - } - } - - return null; -} - -function checkHighlight() -{ - var lastHighlightedNode = highlightedNode; - var lastHighlightingHidden = highlightingHidden; - - highlightedNode = selectedNode; - resetKeyOffset(); - - if ( progress == 1 ) - { - selectedNode.checkHighlight(); - if ( selectedNode.getParent() ) - { - selectedNode.getParent().checkHighlightCenter(); - } - - focusNode.checkHighlightMap(); - } - - if ( highlightedNode != selectedNode ) - { - if ( highlightedNode == focusNode ) - { -// canvas.style.display='none'; -// window.resizeBy(1,0); -// canvas.style.cursor='ew-resize'; -// window.resizeBy(-1,0); -// canvas.style.display='inline'; - } - else - { -// canvas.style.cursor='pointer'; - } - } - else - { -// canvas.style.cursor='auto'; - } - - if - ( - ( - true || - highlightedNode != lastHighlightedNode || - highlightingHidden != highlightingHiddenLast - ) && - progress == 1 - ) - { - draw(); // TODO: handle in update() - } -} - -function checkSelectedCollapse() -{ - var newNode = selectedNode; - - while ( newNode.getCollapse() ) - { - newNode = newNode.children[0]; - } - - if ( newNode.children.length == 0 && newNode.getParent() ) - { - newNode = newNode.getParent(); - } - - if ( newNode != selectedNode ) - { - selectNode(newNode); - } -} - -function clearSearch() -{ - if ( search.value != '' ) - { - search.value = ''; - onSearchChange(); - } -} - -function createSVG() -{ - svgNS = "http://www.w3.org/2000/svg"; - var SVG = {}; - SVG.xlinkns = "http://www.w3.org/1999/xlink"; - - var newSVG = document.createElementNS(svgNS, "svg:svg"); - - newSVG.setAttribute("id", "canvas"); - // How big is the canvas in pixels - newSVG.setAttribute("width", '100%'); - newSVG.setAttribute("height", '100%'); - // Set the coordinates used by drawings in the canvas -// newSVG.setAttribute("viewBox", "0 0 " + imageWidth + " " + imageHeight); - // Define the XLink namespace that SVG uses - newSVG.setAttributeNS - ( - "http://www.w3.org/2000/xmlns/", - "xmlns:xlink", - SVG.xlinkns - ); - - return newSVG; -} - -function degrees(radians) -{ - return radians * 180 / Math.PI; -} - -function draw() -{ - tweenFrames++; - //resize(); -// context.fillRect(0, 0, imageWidth, imageHeight); - context.clearRect(0, 0, imageWidth, imageHeight); - - context.font = fontNormal; - context.textBaseline = 'middle'; - - //context.strokeStyle = 'rgba(0, 0, 0, 0.3)'; - context.translate(centerX, centerY); - - resetKeyOffset(); - - head.draw(false, false); // draw pie slices - head.draw(true, false); // draw labels - - var pathRoot = selectedNode; - - if ( focusNode != 0 && focusNode != selectedNode ) - { - context.globalAlpha = 1; - focusNode.drawHighlight(true); - pathRoot = focusNode; - } - - if - ( - highlightedNode && - highlightedNode.getDepth() >= selectedNode.getDepth() && - highlightedNode != focusNode - ) - { - if - ( - progress == 1 && - highlightedNode != selectedNode && - ( - highlightedNode != focusNode || - focusNode.children.length > 0 - ) - ) - { - context.globalAlpha = 1; - highlightedNode.drawHighlight(true); - } - - //pathRoot = highlightedNode; - } - else if - ( - progress == 1 && - highlightedNode.getDepth() < selectedNode.getDepth() - ) - { - context.globalAlpha = 1; - highlightedNode.drawHighlightCenter(); - } - - if ( quickLook && false) // TEMP - { - context.globalAlpha = 1 - progress / 2; - selectedNode.drawHighlight(true); - } - else if ( progress < 1 )//&& zoomOut() ) - { - if ( !zoomOut)//() ) - { - context.globalAlpha = selectedNode.alphaLine.current(); - selectedNode.drawHighlight(true); - } - else if ( selectedNodeLast ) - { - context.globalAlpha = 1 - 4 * Math.pow(progress - .5, 2); - selectedNodeLast.drawHighlight(false); - } - } - - drawDatasetName(); - - //drawHistory(); - - context.translate(-centerX, -centerY); - context.globalAlpha = 1; - - mapRadius = - (imageHeight / 2 - details.clientHeight - details.offsetTop) / - (pathRoot.getDepth() - 1) * 3 / 4 / 2; - - if ( mapRadius > maxMapRadius ) - { - mapRadius = maxMapRadius; - } - - mapBuffer = mapRadius / 2; - - //context.font = fontNormal; - pathRoot.drawMap(pathRoot); - - if ( hueDisplayName && useHue() ) - { - drawLegend(); - } -} - -function drawBubble(angle, radius, width, radial, flip) -{ - var height = fontSize * 2; - var x; - var y; - - width = width + fontSize; - - if ( radial ) - { - y = -fontSize; - - if ( flip ) - { - x = radius - width + fontSize / 2; - } - else - { - x = radius - fontSize / 2; - } - } - else - { - x = -width / 2; - y = -radius - fontSize; - } - - if ( snapshotMode ) - { - drawBubbleSVG(x + centerX, y + centerY, width, height, fontSize, angle); - } - else - { - drawBubbleCanvas(x, y, width, height, fontSize, angle); - } -} - -function drawBubbleCanvas(x, y, width, height, radius, rotation) -{ - context.strokeStyle = 'black'; - context.lineWidth = highlightLineWidth; - context.fillStyle = 'rgba(255, 255, 255, .75)'; - context.rotate(rotation); - roundedRectangle(x, y, width, fontSize * 2, fontSize); - context.fill(); - context.stroke(); - context.rotate(-rotation); -} - -function drawBubbleSVG(x, y, width, height, radius, rotation) -{ - svg += - '<rect x="' + x + '" y="' + y + - '" width="' + width + - '" height="' + height + - '" rx="' + radius + - '" ry="' + radius + - '" fill="rgba(255, 255, 255, .75)' + - '" class="highlight" ' + - 'transform="rotate(' + - degrees(rotation) + ',' + centerX + ',' + centerY + - ')"/>'; -} - -function drawDatasetName() -{ - var alpha = datasetAlpha.current(); - - if ( alpha > 0 ) - { - var radius = gRadius * compressedRadii[0] / -2; - - if ( alpha > 1 ) - { - alpha = 1; - } - - context.globalAlpha = alpha; - - drawBubble(0, -radius, datasetWidths[currentDataset], false, false); - drawText(datasetNames[currentDataset], 0, radius, 0, 'center', true); - } -} - -function drawHistory() -{ - var alpha = 1; - context.textAlign = 'center'; - - for ( var i = 0; i < nodeHistoryPosition && alpha > 0; i++ ) - { - - context.globalAlpha = alpha - historyAlphaDelta * tweenFactor; - context.fillText - ( - nodeHistory[nodeHistoryPosition - i - 1].name, - 0, - (i + tweenFactor) * historySpacingFactor * fontSize - 1 - ); - - if ( alpha > 0 ) - { - alpha -= historyAlphaDelta; - } - } - - context.globalAlpha = 1; -} - -function drawLegend() -{ - var left = imageWidth * .01; - var width = imageHeight * .0265; - var height = imageHeight * .15; - var top = imageHeight - fontSize * 3.5 - height; - var textLeft = left + width + fontSize / 2; - - context.fillStyle = 'black'; - context.textAlign = 'start'; - context.font = fontNormal; -// context.fillText(valueStartText, textLeft, top + height); -// context.fillText(valueEndText, textLeft, top); - context.fillText(hueDisplayName, left, imageHeight - fontSize * 1.5); - - var gradient = context.createLinearGradient(0, top + height, 0, top); - - for ( var i = 0; i < hueStopPositions.length; i++ ) - { - gradient.addColorStop(hueStopPositions[i], hueStopHsl[i]); - - var textY = top + (1 - hueStopPositions[i]) * height; - - if - ( - i == 0 || - i == hueStopPositions.length - 1 || - textY > top + fontSize && textY < top + height - fontSize - ) - { - context.fillText(hueStopText[i], textLeft, textY); - } - } - - context.fillStyle = gradient; - context.fillRect(left, top, width, height); - context.lineWidth = thinLineWidth; - context.strokeRect(left, top, width, height); -} - -function drawLegendSVG() -{ - var left = imageWidth * .01; - var width = imageHeight * .0265; - var height = imageHeight * .15; - var top = imageHeight - fontSize * 3.5 - height; - var textLeft = left + width + fontSize / 2; - - var text = ''; - - text += svgText(hueDisplayName, left, imageHeight - fontSize * 1.5); - - var svgtest = '<linearGradient id="gradient" x1="0%" y1="100%" x2="0%" y2="0%">'; - - for ( var i = 0; i < hueStopPositions.length; i++ ) - { - svgtest += - '<stop offset="' + round(hueStopPositions[i] * 100) + - '%" style="stop-color:' + hueStopHsl[i] + '"/>'; - - var textY = top + (1 - hueStopPositions[i]) * height; - - if - ( - i == 0 || - i == hueStopPositions.length - 1 || - textY > top + fontSize && textY < top + height - fontSize - ) - { - text += svgText(hueStopText[i], textLeft, textY); - } - } - - svgtest += '</linearGradient>'; - //alert(svgtest); - svg += svgtest; - svg += - '<rect style="fill:url(#gradient)" x="' + left + '" y="' + top + - '" width="' + width + '" height="' + height + '"/>'; - - svg += text; -} - -function drawSearchHighlights(label, bubbleX, bubbleY, rotation, center) -{ - var index = -1; - var labelLength = label.length; - - bubbleX -= fontSize / 4; - - do - { - index = label.toLowerCase().indexOf(search.value.toLowerCase(), index + 1); - - if ( index != -1 && index < labelLength ) - { - var dim = context.measureText(label.substr(0, index)); - var x = bubbleX + dim.width; - - dim = context.measureText(label.substr(index, search.value.length)); - - var y = bubbleY - fontSize * 3 / 4; - var width = dim.width + fontSize / 2; - var height = fontSize * 3 / 2; - var radius = fontSize / 2; - - if ( snapshotMode ) - { - if ( center ) - { - x += centerX; - y += centerY; - } - - svg += - '<rect x="' + x + '" y="' + y + - '" width="' + width + - '" height="' + height + - '" rx="' + radius + - '" ry="' + radius + - '" class="searchHighlight' + - '" transform="rotate(' + - degrees(rotation) + ',' + centerX + ',' + centerY + - ')"/>'; - } - else - { - context.fillStyle = 'rgb(255, 255, 100)'; - context.rotate(rotation); - roundedRectangle(x, y, width, height, radius); - context.fill(); - context.rotate(-rotation); - } - } - } - while ( index != -1 && index < labelLength ); -} - -function drawText(text, x, y, angle, anchor, bold, color) -{ - if ( color == undefined ) - { - color = 'black'; - } - - if ( snapshotMode ) - { - svg += - '<text x="' + (centerX + x) + '" y="' + (centerY + y) + - '" text-anchor="' + anchor + '" style="font-color:' + color + ';font-weight:' + (bold ? 'bold' : 'normal') + - '" transform="rotate(' + degrees(angle) + ',' + centerX + ',' + centerY + ')">' + - text + '</text>'; - } - else - { - context.fillStyle = color; - context.textAlign = anchor; - context.font = bold ? fontBold : fontNormal; - context.rotate(angle); - context.fillText(text, x, y); - context.rotate(-angle); - } -} - -function drawTextPolar -( - text, - innerText, - angle, - radius, - radial, - bubble, - bold, - searchResult, - searchResults -) -{ - var anchor; - var textX; - var textY; - var spacer; - var totalText = text; - var flip; - - if ( snapshotMode ) - { - spacer = '   '; - } - else - { - spacer = ' '; - } - - if ( radial ) - { - flip = angle < 3 * Math.PI / 2; - - if ( flip ) - { - angle -= Math.PI; - radius = -radius; - anchor = 'end'; - - if ( innerText ) - { - totalText = text + spacer + innerText; - } - } - else - { - anchor = 'start'; - - if ( innerText ) - { - totalText = innerText + spacer + text; - } - } - - textX = radius; - textY = 0; - } - else - { - flip = angle < Math.PI || angle > 2 * Math.PI; - var label; - - anchor = snapshotMode ? 'middle' : 'center'; - - if ( flip ) - { - angle -= Math.PI; - radius = -radius; - } - - angle += Math.PI / 2; - textX = 0; - textY = -radius; - } - - if ( bubble ) - { - var textActual = totalText; - - if ( innerText && snapshotMode ) - { - if ( flip ) - { - textActual = text + ' ' + innerText; - } - else - { - textActual = innerText + ' ' + text; - } - } - - if ( searchResults ) - { - textActual = textActual + searchResultString(searchResults); - } - - var textWidth = measureText(textActual, bold); - - var x = textX; - - if ( anchor == 'end' ) - { - x -= textWidth; - } - else if ( anchor != 'start' ) - { - // centered - x -= textWidth / 2; - } - - drawBubble(angle, radius, textWidth, radial, flip); - - if ( searchResult ) - { - drawSearchHighlights - ( - textActual, - x, - textY, - angle, - true - ) - } - } - - if ( searchResults ) - { - totalText = totalText + searchResultString(searchResults); - } - - drawText(totalText, textX, textY, angle, anchor, bold); - - return flip; -} - -function drawTick(start, length, angle) -{ - if ( snapshotMode ) - { - svg += - '<line x1="' + (centerX + start) + - '" y1="' + centerY + - '" x2="' + (centerX + start + length) + - '" y2="' + centerY + - '" class="tick" transform="rotate(' + - degrees(angle) + ',' + centerX + ',' + centerY + - ')"/>'; - } - else - { - context.rotate(angle); - context.beginPath(); - context.moveTo(start, 0); - context.lineTo(start + length, 0); - context.lineWidth = thinLineWidth * 2; - context.stroke(); - context.rotate(-angle); - } -} - -function drawWedge -( - angleStart, - angleEnd, - radiusInner, - radiusOuter, - color, - patternAlpha, - highlight -) -{ - if ( context.globalAlpha == 0 ) - { - return; - } - - if ( snapshotMode ) - { - if ( angleEnd == angleStart + Math.PI * 2 ) - { - // fudge to prevent overlap, which causes arc ambiguity - // - angleEnd -= .1 / gRadius; - } - - var longArc = angleEnd - angleStart > Math.PI ? 1 : 0; - - var x1 = centerX + radiusInner * Math.cos(angleStart); - var y1 = centerY + radiusInner * Math.sin(angleStart); - - var x2 = centerX + gRadius * Math.cos(angleStart); - var y2 = centerY + gRadius * Math.sin(angleStart); - - var x3 = centerX + gRadius * Math.cos(angleEnd); - var y3 = centerY + gRadius * Math.sin(angleEnd); - - var x4 = centerX + radiusInner * Math.cos(angleEnd); - var y4 = centerY + radiusInner * Math.sin(angleEnd); - - var dArray = - [ - " M ", x1, ",", y1, - " L ", x2, ",", y2, - " A ", gRadius, ",", gRadius, " 0 ", longArc, ",1 ", x3, ",", y3, - " L ", x4, ",", y4, - " A ", radiusInner, ",", radiusInner, " 0 ", longArc, " 0 ", x1, ",", y1, - " Z " - ]; - - svg += - '<path class="'+ (highlight ? 'highlight' : 'wedge') + '" fill="' + color + - '" d="' + dArray.join('') + '"/>'; - - if ( patternAlpha > 0 ) - { - svg += - '<path class="wedge" fill="url(#hiddenPattern)" d="' + - dArray.join('') + '"/>'; - } - } - else - { - // fudge to prevent seams during animation - // - angleEnd += 1 / gRadius; - - context.fillStyle = color; - context.beginPath(); - context.arc(0, 0, radiusInner, angleStart, angleEnd, false); - context.arc(0, 0, radiusOuter, angleEnd, angleStart, true); - context.closePath(); - context.fill(); - - if ( patternAlpha > 0 ) - { - context.save(); - context.clip(); - context.globalAlpha = patternAlpha; - context.fillStyle = hiddenPattern; - context.fill(); - context.restore(); - } - - if ( highlight ) - { - context.lineWidth = highlight ? highlightLineWidth : thinLineWidth; - context.strokeStyle = 'black'; - context.stroke(); - } - } -} - -function expand(node) -{ - selectNode(node); - updateView(); -} - -function focusLost() -{ - mouseX = -1; - mouseY = -1; - checkHighlight(); - document.body.style.cursor = 'auto'; -} - -function fontSizeDecrease() -{ - if ( fontSize > 1 ) - { - fontSize--; - updateViewNeeded = true; - } -} - -function fontSizeIncrease() -{ - fontSize++; - updateViewNeeded = true; -} - -function getGetString(name, value, bool) -{ - return name + '=' + (bool ? value ? 'true' : 'false' : value); -} - -function hideLink() -{ - hide(linkText); - show(linkButton); -} - -function show(object) -{ - object.style.display = 'inline'; -} - -function hide(object) -{ - object.style.display = 'none'; -} - -function showLink() -{ - var urlHalves = String(document.location).split('?'); - var newGetVariables = new Array(); - - newGetVariables.push - ( - getGetString('dataset', currentDataset, false), - getGetString('node', selectedNode.id, false), - getGetString('collapse', collapse, true), - getGetString('color', useHue(), true), - getGetString('depth', maxAbsoluteDepth - 1, false), - getGetString('font', fontSize, false), - getGetString('key', showKeys, true) - ); - - hide(linkButton); - show(linkText); - linkText.value = urlHalves[0] + '?' + getVariables.concat(newGetVariables).join('&'); - //linkText.disabled = false; - linkText.focus(); - linkText.select(); - //linkText.disabled = true; -// document.location = urlHalves[0] + '?' + getVariables.join('&'); -} - -function getFirstChild(element) -{ - element = element.firstChild; - - if ( element && element.nodeType != 1 ) - { - element = getNextSibling(element); - } - - return element; -} - -function getNextSibling(element) -{ - do - { - element = element.nextSibling; - } - while ( element && element.nodeType != 1 ); - - return element; -} - -function getPercentage(fraction) -{ - return round(fraction * 100); -} - -function hslText(hue) -{ - if ( 1 || snapshotMode ) - { - // Safari doesn't seem to allow hsl() in SVG - - var rgb = hslToRgb(hue, saturation, (lightnessBase + lightnessMax) / 2); - - return rgbText(rgb.r, rgb.g, rgb.b); - } - else - { - var hslArray = - [ - 'hsl(', - Math.floor(hue * 360), - ',', - Math.floor(saturation * 100), - '%,', - Math.floor((lightnessBase + lightnessMax) * 50), - '%)' - ]; - - return hslArray.join(''); - } -} - -function hslToRgb(h, s, l) -{ - var m1, m2; - var r, g, b; - - if (s == 0) - { - r = g = b = Math.floor((l * 255)); - } - else - { - if (l <= 0.5) - { - m2 = l * (s + 1); - } - else - { - m2 = l + s - l * s; - } - - m1 = l * 2 - m2; - - r = Math.floor(hueToRgb(m1, m2, h + 1 / 3)); - g = Math.floor(hueToRgb(m1, m2, h)); - b = Math.floor(hueToRgb(m1, m2, h - 1/3)); - } - - return {r: r, g: g, b: b}; -} - -function hueToRgb(m1, m2, hue) -{ - var v; - - while (hue < 0) - { - hue += 1; - } - - while (hue > 1) - { - hue -= 1; - } - - if (6 * hue < 1) - v = m1 + (m2 - m1) * hue * 6; - else if (2 * hue < 1) - v = m2; - else if (3 * hue < 2) - v = m1 + (m2 - m1) * (2/3 - hue) * 6; - else - v = m1; - - return 255 * v; -} - -function interpolateHue(hueStart, hueEnd, valueStart, valueEnd) -{ - // since the gradient will be RGB based, we need to add stops to hit all the - // colors in the hue spectrum - - hueStopPositions = new Array(); - hueStopHsl = new Array(); - hueStopText = new Array(); - - hueStopPositions.push(0); - hueStopHsl.push(hslText(hueStart)); - hueStopText.push(round(valueStart)); - - for - ( - var i = (hueStart > hueEnd ? 5 / 6 : 1 / 6); - (hueStart > hueEnd ? i > 0 : i < 1); - i += (hueStart > hueEnd ? -1 : 1) / 6 - ) - { - if - ( - hueStart > hueEnd ? - i > hueEnd && i < hueStart : - i > hueStart && i < hueEnd - ) - { - hueStopPositions.push(lerp(i, hueStart, hueEnd, 0, 1)); - hueStopHsl.push(hslText(i)); - hueStopText.push(round(lerp - ( - i, - hueStart, - hueEnd, - valueStart, - valueEnd - ))); - } - } - - hueStopPositions.push(1); - hueStopHsl.push(hslText(hueEnd)); - hueStopText.push(round(valueEnd)); -} - -function keyLineAngle(angle, keyAngle, bendRadius, keyX, keyY, pointsX, pointsY) -{ - if ( angle < Math.PI / 2 && keyY < bendRadius * Math.sin(angle) - || angle > Math.PI / 2 && keyY < bendRadius) - { - return Math.asin(keyY / bendRadius); - } - else - { - // find the angle of the normal to a tangent line that goes to - // the label - - var textDist = Math.sqrt - ( - Math.pow(keyX, 2) + - Math.pow(keyY, 2) - ); - - var tanAngle = Math.acos(bendRadius / textDist) + keyAngle; - - if ( angle < tanAngle || angle < Math.PI / 2 )//|| labelLeft < centerX ) - { - // angle doesn't reach far enough for tangent; collapse and - // connect directly to label - - if ( keyY / Math.tan(angle) > 0 ) - { - pointsX.push(keyY / Math.tan(angle)); - pointsY.push(keyY); - } - else - { - pointsX.push(bendRadius * Math.cos(angle)); - pointsY.push(bendRadius * Math.sin(angle)); - } - - return angle; - } - else - { - return tanAngle; - } - } -} - -function keyOffset() -{ - return imageHeight - (keys - currentKey + 1) * (keySize + keyBuffer) + keyBuffer - margin; -} - -function lerp(value, fromStart, fromEnd, toStart, toEnd) -{ - return (value - fromStart) * - (toEnd - toStart) / - (fromEnd - fromStart) + - toStart; -} - -function createCanvas() -{ - canvas = document.createElement('canvas'); - document.body.appendChild(canvas); - context = canvas.getContext('2d'); -} - -function load() -{ - document.body.style.overflow = "hidden"; - document.body.style.margin = 0; - - createCanvas(); - - if ( context == undefined ) - { - document.body.innerHTML = '\ -<br/>This browser does not support HTML5 (see \ -<a href="https://github.com/marbl/Krona/wiki/Browser%20support">Browser support</a>).\ - '; - return; - } - - if ( typeof context.fillText != 'function' ) - { - document.body.innerHTML = '\ -<br/>This browser does not support HTML5 canvas text (see \ -<a href="https://github.com/marbl/Krona/wiki/Browser%20support">Browser support</a>).\ - '; - return; - } - - resize(); - - var kronaElement = document.getElementsByTagName('krona')[0]; - - var magnitudeName; - var hueName; - var hueDefault; - var hueStart; - var hueEnd; - var valueStart; - var valueEnd; - - if ( kronaElement.getAttribute('collapse') != undefined ) - { - collapse = kronaElement.getAttribute('collapse') == 'true'; - } - - if ( kronaElement.getAttribute('key') != undefined ) - { - showKeys = kronaElement.getAttribute('key') == 'true'; - } - - for - ( - var element = getFirstChild(kronaElement); - element; - element = getNextSibling(element) - ) - { - switch ( element.tagName.toLowerCase() ) - { - case 'attributes': - magnitudeName = element.getAttribute('magnitude'); - // - for - ( - var attributeElement = getFirstChild(element); - attributeElement; - attributeElement = getNextSibling(attributeElement) - ) - { - var tag = attributeElement.tagName.toLowerCase(); - - if ( tag == 'attribute' ) - { - var attribute = new Attribute(); - attribute.name = attributeElement.firstChild.nodeValue.toLowerCase(); - attribute.displayName = attributeElement.getAttribute('display'); - - if ( attributeElement.getAttribute('hrefBase') ) - { - attribute.hrefBase = attributeElement.getAttribute('hrefBase'); - } - - if ( attributeElement.getAttribute('target') ) - { - attribute.target = attributeElement.getAttribute('target'); - } - - if ( attribute.name == magnitudeName ) - { - magnitudeIndex = attributes.length; - } - - if ( attributeElement.getAttribute('listAll') ) - { - attribute.listAll = attributeElement.getAttribute('listAll').toLowerCase(); - } - else if ( attributeElement.getAttribute('listNode') ) - { - attribute.listNode = attributeElement.getAttribute('listNode').toLowerCase(); - } - else if ( attributeElement.getAttribute('dataAll') ) - { - attribute.dataAll = attributeElement.getAttribute('dataAll').toLowerCase(); - } - else if ( attributeElement.getAttribute('dataNode') ) - { - attribute.dataNode = attributeElement.getAttribute('dataNode').toLowerCase(); - } - - if ( attributeElement.getAttribute('postUrl') ) - { - attribute.postUrl = attributeElement.getAttribute('postUrl'); - } - - if ( attributeElement.getAttribute('postVar') ) - { - attribute.postVar = attributeElement.getAttribute('postVar'); - } - - if ( attributeElement.getAttribute('mono') ) - { - attribute.mono = true; - } - - attributes.push(attribute); - } - else if ( tag == 'list' ) - { - var attribute = new Attribute(); - - attribute.name = attributeElement.firstChild.nodeValue; - attribute.list = true; - attributes.push(attribute); - } - else if ( tag == 'data' ) - { - var attribute = new Attribute(); - - attribute.name = attributeElement.firstChild.nodeValue; - attribute.data = true; - attributes.push(attribute); - - var enableScript = document.createElement('script'); - var date = new Date(); - enableScript.src = - attributeElement.getAttribute('enable') + '?' + - date.getTime(); - document.body.appendChild(enableScript); - } - } - break; - - case 'color': - hueName = element.getAttribute('attribute'); - hueStart = Number(element.getAttribute('hueStart')) / 360; - hueEnd = Number(element.getAttribute('hueEnd')) / 360; - valueStart = Number(element.getAttribute('valueStart')); - valueEnd = Number(element.getAttribute('valueEnd')); - // - interpolateHue(hueStart, hueEnd, valueStart, valueEnd); - // - if ( element.getAttribute('default') == 'true' ) - { - hueDefault = true; - } - break; - - case 'datasets': - datasetNames = new Array(); - // - for ( j = getFirstChild(element); j; j = getNextSibling(j) ) - { - datasetNames.push(j.firstChild.nodeValue); - } - datasets = datasetNames.length; - break; - - case 'node': - head = loadTreeDOM - ( - element, - magnitudeName, - hueName, - hueStart, - hueEnd, - valueStart, - valueEnd - ); - break; - } - } - - // get GET options - // - var urlHalves = String(document.location).split('?'); - var datasetDefault = 0; - var maxDepthDefault; - var nodeDefault = 0; - // - if ( urlHalves[1] ) - { - var vars = urlHalves[1].split('&'); - - for ( i = 0; i < vars.length; i++ ) - { - var pair = vars[i].split('='); - - switch ( pair[0] ) - { - case 'collapse': - collapse = pair[1] == 'true'; - break; - - case 'color': - hueDefault = pair[1] == 'true'; - break; - - case 'dataset': - datasetDefault = Number(pair[1]); - break; - - case 'depth': - maxDepthDefault = Number(pair[1]) + 1; - break; - - case 'key': - showKeys = pair[1] == 'true'; - break; - - case 'font': - fontSize = Number(pair[1]); - break; - - case 'node': - nodeDefault = Number(pair[1]); - break; - - default: - getVariables.push(pair[0] + '=' + pair[1]); - break; - } - } - } - - addOptionElements(hueName, hueDefault); - setCallBacks(); - - head.sort(); - maxAbsoluteDepth = 0; - selectDataset(datasetDefault); - - if ( maxDepthDefault && maxDepthDefault < head.maxDepth ) - { - maxAbsoluteDepth = maxDepthDefault; - } - else - { - maxAbsoluteDepth = head.maxDepth; - } - - selectNode(nodes[nodeDefault]); - - setInterval(update, 20); - - window.onresize = handleResize; - updateMaxAbsoluteDepth(); - updateViewNeeded = true; -} - -function loadTreeDOM -( - domNode, - magnitudeName, - hueName, - hueStart, - hueEnd, - valueStart, - valueEnd -) -{ - var newNode = new Node(); - - newNode.name = domNode.getAttribute('name'); - - if ( domNode.getAttribute('href') ) - { - newNode.href = domNode.getAttribute('href'); - } - - if ( hueName ) - { - newNode.hues = new Array(); - } - - for ( var i = getFirstChild(domNode); i; i = getNextSibling(i) ) - { - switch ( i.tagName.toLowerCase() ) - { - case 'node': - var newChild = loadTreeDOM - ( - i, - magnitudeName, - hueName, - hueStart, - hueEnd, - valueStart, - valueEnd - ); - newChild.parent = newNode; - newNode.children.push(newChild); - break; - - default: - var attributeName = i.tagName.toLowerCase(); - var index = attributeIndex(attributeName); - // - newNode.attributes[index] = new Array(); - // - for ( var j = getFirstChild(i); j; j = getNextSibling(j) ) - { - if ( attributes[index] == undefined ) - { - var x = 5; - } - if ( attributes[index].list ) - { - newNode.attributes[index].push(new Array()); - - for ( var k = getFirstChild(j); k; k = getNextSibling(k) ) - { - newNode.attributes[index][newNode.attributes[index].length - 1].push(k.firstChild.nodeValue); - } - } - else - { - var value = j.firstChild ? j.firstChild.nodeValue : ''; - - if ( j.getAttribute('href') ) - { - var target; - - if ( attributes[index].target ) - { - target = ' target="' + attributes[index].target + '"'; - } - - value = '<a href="' + attributes[index].hrefBase + j.getAttribute('href') + '"' + target + '>' + value + '</a>'; - } - - newNode.attributes[index].push(value); - } - } - // - if ( attributeName == magnitudeName || attributeName == hueName ) - { - for ( j = 0; j < datasets; j++ ) - { - var value = newNode.attributes[index][j] == undefined ? 0 : Number(newNode.attributes[index][j]); - - newNode.attributes[index][j] = value; - - if ( attributeName == hueName ) - { - var hue = lerp - ( - value, - valueStart, - valueEnd, - hueStart, - hueEnd - ); - - if ( hue < hueStart == hueStart < hueEnd ) - { - hue = hueStart; - } - else if ( hue > hueEnd == hueStart < hueEnd ) - { - hue = hueEnd; - } - - newNode.hues[j] = hue; - } - } - - if ( attributeName == hueName ) - { - newNode.hue = new Tween(newNode.hues[0], newNode.hues[0]); - } - } - break; - } - } - - return newNode; -} - -function maxAbsoluteDepthDecrease() -{ - if ( maxAbsoluteDepth > 2 ) - { - maxAbsoluteDepth--; - head.setMaxDepths(); - handleResize(); - } -} - -function maxAbsoluteDepthIncrease() -{ - if ( maxAbsoluteDepth < head.maxDepth ) - { - maxAbsoluteDepth++; - head.setMaxDepths(); - handleResize(); - } -} - -function measureText(text, bold) -{ - context.font = bold ? fontBold : fontNormal; - var dim = context.measureText(text); - return dim.width; -} - -function min(a, b) -{ - return a < b ? a : b; -} - -function minWidth() -{ - // Min wedge width (at center) for displaying a node (or for displaying a - // label if it's at the highest level being viewed, multiplied by 2 to make - // further calculations simpler - - return (fontSize * 2.3); -} - -function mouseMove(e) -{ - mouseX = e.pageX; - mouseY = e.pageY - headerHeight; - mouseXRel = (mouseX - centerX) * backingScale() - mouseYRel = (mouseY - centerY) * backingScale() - - if ( head && ! quickLook ) - { - checkHighlight(); - } -} - -function mouseClick(e) -{ - if ( highlightedNode == focusNode && focusNode != selectedNode || selectedNode.hasParent(highlightedNode) ) - { - if ( highlightedNode.hasChildren() ) - { - expand(highlightedNode); - } - } - else if ( progress == 1 )//( highlightedNode != selectedNode ) - { - setFocus(highlightedNode); -// document.body.style.cursor='ew-resize'; - draw(); - checkHighlight(); - var date = new Date(); - mouseDownTime = date.getTime(); - mouseDown = true; - } -} - -function mouseUp(e) -{ - if ( quickLook ) - { - navigateBack(); - quickLook = false; - } - - mouseDown = false; -} - -function navigateBack() -{ - if ( nodeHistoryPosition > 0 ) - { - nodeHistory[nodeHistoryPosition] = selectedNode; - nodeHistoryPosition--; - - if ( nodeHistory[nodeHistoryPosition].collapse ) - { - collapseCheckBox.checked = collapse = false; - } - - setSelectedNode(nodeHistory[nodeHistoryPosition]); - updateDatasetButtons(); - updateView(); - } -} - -function navigateUp() -{ - if ( selectedNode.getParent() ) - { - selectNode(selectedNode.getParent()); - updateView(); - } -} - -function navigateForward() -{ - if ( nodeHistoryPosition < nodeHistory.length - 1 ) - { - nodeHistoryPosition++; - var newNode = nodeHistory[nodeHistoryPosition]; - - if ( newNode.collapse ) - { - collapseCheckBox.checked = collapse = false; - } - - if ( nodeHistoryPosition == nodeHistory.length - 1 ) - { - // this will ensure the forward button is disabled - - nodeHistory.length = nodeHistoryPosition; - } - - setSelectedNode(newNode); - updateDatasetButtons(); - updateView(); - } -} - -function nextDataset() -{ - var newDataset = currentDataset; - - do - { - if ( newDataset == datasets - 1 ) - { - newDataset = 0; - } - else - { - newDataset++; - } - } - while ( datasetDropDown.options[newDataset].disabled ) - - selectDataset(newDataset); -} - -function onDatasetChange() -{ - selectDataset(datasetDropDown.selectedIndex); -} - -function onKeyDown(event) -{ - if - ( - event.keyCode == 37 && - document.activeElement.id != 'search' && - document.activeElement.id != 'linkText' - ) - { - navigateBack(); - event.preventDefault(); - } - else if - ( - event.keyCode == 39 && - document.activeElement.id != 'search' && - document.activeElement.id != 'linkText' - ) - { - navigateForward(); - event.preventDefault(); - } - else if ( event.keyCode == 38 && datasets > 1 ) - { - prevDataset(); - - //if ( document.activeElement.id == 'datasets' ) - { - event.preventDefault(); - } - } - else if ( event.keyCode == 40 && datasets > 1 ) - { - nextDataset(); - - //if ( document.activeElement.id == 'datasets' ) - { - event.preventDefault(); - } - } - else if ( event.keyCode == 9 && datasets > 1 ) - { - selectLastDataset(); - event.preventDefault(); - } - else if ( event.keyCode == 83 ) - { - progress += .2; - } - else if ( event.keyCode == 66 ) - { - progress -= .2; - } - else if ( event.keyCode == 70 ) - { - progress = 1; - } -} - -function onKeyPress(event) -{ - if ( event.keyCode == 38 && datasets > 1 ) - { -// prevDataset(); - - //if ( document.activeElement.id == 'datasets' ) - { - event.preventDefault(); - } - } - else if ( event.keyCode == 40 && datasets > 1 ) - { -// nextDataset(); - - //if ( document.activeElement.id == 'datasets' ) - { - event.preventDefault(); - } - } -} - -function onKeyUp(event) -{ - if ( event.keyCode == 27 && document.activeElement.id == 'search' ) - { - search.value = ''; - onSearchChange(); - } - else if ( event.keyCode == 38 && datasets > 1 ) - { -// prevDataset(); - - //if ( document.activeElement.id == 'datasets' ) - { - event.preventDefault(); - } - } - else if ( event.keyCode == 40 && datasets > 1 ) - { -// nextDataset(); - - //if ( document.activeElement.id == 'datasets' ) - { - event.preventDefault(); - } - } -} - -function onSearchChange() -{ - nSearchResults = 0; - head.search(); - - if ( search.value == '' ) - { - searchResults.innerHTML = ''; - } - else - { - searchResults.innerHTML = nSearchResults + ' results'; - } - - setFocus(selectedNode); - draw(); -} - -function post(url, variable, value, postWindow) -{ - var form = document.createElement('form'); - var input = document.createElement('input'); - var inputDataset = document.createElement('input'); - - form.appendChild(input); - form.appendChild(inputDataset); - - form.method = "POST"; - form.action = url; - - if ( postWindow == undefined ) - { - form.target = '_blank'; - postWindow = window; - } - - input.type = 'hidden'; - input.name = variable; - input.value = value; - - inputDataset.type = 'hidden'; - inputDataset.name = 'dataset'; - inputDataset.value = currentDataset; - - postWindow.document.body.appendChild(form); - form.submit(); -} - -function prevDataset() -{ - var newDataset = currentDataset; - - do - { - if ( newDataset == 0 ) - { - newDataset = datasets - 1; - } - else - { - newDataset--; - } - } - while ( datasetDropDown.options[newDataset].disabled ); - - selectDataset(newDataset); -} - -function radiusDecrease() -{ - if ( bufferFactor < .309 ) - { - bufferFactor += .03; - updateViewNeeded = true; - } -} - -function radiusIncrease() -{ - if ( bufferFactor > .041 ) - { - bufferFactor -= .03; - updateViewNeeded = true; - } -} - -function resetKeyOffset() -{ - currentKey = 1; - keyMinTextLeft = centerX + gRadius + buffer - buffer / (keys + 1) / 2 + fontSize / 2; - keyMinAngle = 0; -} - -function rgbText(r, g, b) -{ - var rgbArray = - [ - "rgb(", - Math.floor(r), - ",", - Math.floor(g), - ",", - Math.floor(b), - ")" - ]; - - return rgbArray.join(''); -} - -function round(number) -{ - if ( number >= 1 || number <= -1 ) - { - return number.toFixed(0); - } - else - { - return number.toPrecision(1); - } -} - -function roundedRectangle(x, y, width, height, radius) -{ - if ( radius * 2 > width ) - { - radius = width / 2; - } - - if ( radius * 2 > height ) - { - radius = height / 2; - } - - context.beginPath(); - context.arc(x + radius, y + radius, radius, Math.PI, Math.PI * 3 / 2, false); - context.lineTo(x + width - radius, y); - context.arc(x + width - radius, y + radius, radius, Math.PI * 3 / 2, Math.PI * 2, false); - context.lineTo(x + width, y + height - radius); - context.arc(x + width - radius, y + height - radius, radius, 0, Math.PI / 2, false); - context.lineTo(x + radius, y + height); - context.arc(x + radius, y + height - radius, radius, Math.PI / 2, Math.PI, false); - context.lineTo(x, y + radius); -} - -function passClick(e) -{ - mouseClick(e); -} - -function searchResultString(results) -{ - var searchResults = this.searchResults; - - if ( this.isSearchResult ) - { - // don't count ourselves - searchResults--; - } - - return ' - ' + results + (results > 1 ? ' results' : ' result'); -} - -function setCallBacks() -{ - canvas.onselectstart = function(){return false;} // prevent unwanted highlighting - options.onselectstart = function(){return false;} // prevent unwanted highlighting - document.onmousemove = mouseMove; - window.onblur = focusLost; - window.onmouseout = focusLost; - document.onkeyup = onKeyUp; - document.onkeydown = onKeyDown; - canvas.onmousedown = mouseClick; - document.onmouseup = mouseUp; - keyControl.onclick = toggleKeys; - collapseCheckBox = document.getElementById('collapse'); - collapseCheckBox.checked = collapse; - collapseCheckBox.onclick = handleResize; - collapseCheckBox.onmousedown = suppressEvent; - maxAbsoluteDepthText = document.getElementById('maxAbsoluteDepth'); - maxAbsoluteDepthButtonDecrease = document.getElementById('maxAbsoluteDepthDecrease'); - maxAbsoluteDepthButtonIncrease = document.getElementById('maxAbsoluteDepthIncrease'); - maxAbsoluteDepthButtonDecrease.onclick = maxAbsoluteDepthDecrease; - maxAbsoluteDepthButtonIncrease.onclick = maxAbsoluteDepthIncrease; - maxAbsoluteDepthButtonDecrease.onmousedown = suppressEvent; - maxAbsoluteDepthButtonIncrease.onmousedown = suppressEvent; - fontSizeText = document.getElementById('fontSize'); - fontSizeButtonDecrease = document.getElementById('fontSizeDecrease'); - fontSizeButtonIncrease = document.getElementById('fontSizeIncrease'); - fontSizeButtonDecrease.onclick = fontSizeDecrease; - fontSizeButtonIncrease.onclick = fontSizeIncrease; - fontSizeButtonDecrease.onmousedown = suppressEvent; - fontSizeButtonIncrease.onmousedown = suppressEvent; - radiusButtonDecrease = document.getElementById('radiusDecrease'); - radiusButtonIncrease = document.getElementById('radiusIncrease'); - radiusButtonDecrease.onclick = radiusDecrease; - radiusButtonIncrease.onclick = radiusIncrease; - radiusButtonDecrease.onmousedown = suppressEvent; - radiusButtonIncrease.onmousedown = suppressEvent; - maxAbsoluteDepth = 0; - backButton = document.getElementById('back'); - backButton.onclick = navigateBack; - backButton.onmousedown = suppressEvent; - forwardButton = document.getElementById('forward'); - forwardButton.onclick = navigateForward; - forwardButton.onmousedown = suppressEvent; - snapshotButton = document.getElementById('snapshot'); - snapshotButton.onclick = snapshot; - snapshotButton.onmousedown = suppressEvent; - detailsName = document.getElementById('detailsName'); - detailsExpand = document.getElementById('detailsExpand'); - detailsInfo = document.getElementById('detailsInfo'); - search = document.getElementById('search'); - search.onkeyup = onSearchChange; - search.onmousedown = suppressEvent; - searchResults = document.getElementById('searchResults'); - useHueDiv = document.getElementById('useHueDiv'); - linkButton = document.getElementById('linkButton'); - linkButton.onclick = showLink; - linkButton.onmousedown = suppressEvent; - linkText = document.getElementById('linkText'); - linkText.onblur = hideLink; - linkText.onmousedown = suppressEvent; - hide(linkText); - var helpButton = document.getElementById('help'); - helpButton.onmousedown = suppressEvent; - var searchClear = document.getElementById('searchClear'); - searchClear.onmousedown = suppressEvent; - if ( datasets > 1 ) - { - datasetDropDown.onmousedown = suppressEvent; - var prevDatasetButton = document.getElementById('prevDataset'); - prevDatasetButton.onmousedown = suppressEvent; - var nextDatasetButton = document.getElementById('nextDataset'); - nextDatasetButton.onmousedown = suppressEvent; - var lastDatasetButton = document.getElementById('lastDataset'); - lastDatasetButton.onmousedown = suppressEvent; - } - - image = document.getElementById('hiddenImage'); - image.onload = function() - { - hiddenPattern = context.createPattern(image, 'repeat'); - } - - var loadingImageElement = document.getElementById('loadingImage'); - - if ( loadingImageElement ) - { - loadingImage = loadingImageElement.src; - } -} - -function selectDataset(newDataset) -{ - lastDataset = currentDataset; - currentDataset = newDataset - if ( datasets > 1 ) - { - datasetDropDown.selectedIndex = currentDataset; - updateDatasetButtons(); - datasetAlpha.start = 1.5; - datasetChanged = true; - } - head.setMagnitudes(0); - head.setDepth(1, 1); - head.setMaxDepths(); - handleResize(); -} - -function selectLastDataset() -{ - selectDataset(lastDataset); - handleResize(); -} - -function selectNode(newNode) -{ - if ( selectedNode != newNode ) - { - // truncate history at current location to create a new branch - // - nodeHistory.length = nodeHistoryPosition; - - if ( selectedNode != 0 ) - { - nodeHistory.push(selectedNode); - nodeHistoryPosition++; - } - - setSelectedNode(newNode); - //updateView(); - } - - updateDatasetButtons(); -} - -function setFocus(node) -{ - if ( node == focusNode ) - { -// return; - } - - focusNode = node; - - if ( node.href ) - { - detailsName.innerHTML = - '<a target="_blank" href="' + node.href + '">' + node.name + '</a>'; - } - else - { - detailsName.innerHTML = node.name; - } - - var table = '<table>'; - //TODO: use CSS margins instead of an additional column - table += '<tr><td></td><td></td></tr>'; - - for ( var i = 0; i < node.attributes.length; i++ ) - { - if ( attributes[i].displayName && node.attributes[i] != undefined ) - { - var index = node.attributes[i].length == 1 && attributes[i].mono ? 0 : currentDataset; - - if ( typeof node.attributes[i][currentDataset] == 'number' || node.attributes[i][index] != undefined && node.attributes[i][currentDataset] != '' ) - { - var value = node.attributes[i][index]; - - if ( attributes[i].listNode != undefined ) - { - value = - '<a href="" onclick="showList(' + - attributeIndex(attributes[i].listNode) + ',' + i + - ',false);return false;" title="Show list">' + - value + '</a>'; - } - else if ( attributes[i].listAll != undefined ) - { - value = - '<a href="" onclick="showList(' + - attributeIndex(attributes[i].listAll) + ',' + i + - ',true);return false;" title="Show list">' + - value + '</a>'; - } - else if ( attributes[i].dataNode != undefined && dataEnabled ) - { - value = - '<a href="" onclick="showData(' + - attributeIndex(attributes[i].dataNode) + ',' + i + - ',false);return false;" title="Show data">' + - value + '</a>'; - } - else if ( attributes[i].dataAll != undefined && dataEnabled ) - { - value = - '<a href="" onclick="showData(' + - attributeIndex(attributes[i].dataAll) + ',' + i + - ',true);return false;" title="Show data">' + - value + '</a>'; - } - - table += - '<tr><td><strong>' + attributes[i].displayName + ':</strong></td><td>' + - value + '</td></tr>'; - } - } - } - - table += '</table>'; - detailsInfo.innerHTML = table; - - detailsExpand.disabled = !focusNode.hasChildren() || focusNode == selectedNode; -} - -function setSelectedNode(newNode) -{ - if ( selectedNode && selectedNode.hasParent(newNode) ) - { - zoomOut = true; - } - else - { - zoomOut = false; - } - - selectedNodeLast = selectedNode; - selectedNode = newNode; - - //if ( focusNode != selectedNode ) - { - setFocus(selectedNode); - } -} - -function waitForData(dataWindow, target, title, time, postUrl, postVar) -{ - if ( nodeData.length == target ) - { - if ( postUrl != undefined ) - { - for ( var i = 0; i < nodeData.length; i++ ) - { - nodeData[i] = nodeData[i].replace(/\n/g, ','); - } - - var postString = nodeData.join(''); - postString = postString.slice(0, -1); - - dataWindow.document.body.removeChild(dataWindow.document.getElementById('loading')); - document.body.removeChild(document.getElementById('data')); - - post(postUrl, postVar, postString, dataWindow); - } - else - { - //dataWindow.document.body.removeChild(dataWindow.document.getElementById('loading')); - //document.body.removeChild(document.getElementById('data')); - - dataWindow.document.open(); - dataWindow.document.write('<pre>' + nodeData.join('') + '</pre>'); - dataWindow.document.close(); - } - - dataWindow.document.title = title; // replace after document.write() - } - else - { - var date = new Date(); - - if ( date.getTime() - time > 10000 ) - { - dataWindow.document.body.removeChild(dataWindow.document.getElementById('loading')); - document.body.removeChild(document.getElementById('data')); - dataWindow.document.body.innerHTML = - 'Timed out loading supplemental files for:<br/>' + document.location; - } - else - { - setTimeout(function() {waitForData(dataWindow, target, title, time, postUrl, postVar);}, 100); - } - } -} - -function data(newData) -{ - nodeData.push(newData); -} - -function enableData() -{ - dataEnabled = true; -} - -function showData(indexData, indexAttribute, summary) -{ - var dataWindow = window.open('', '_blank'); - var title = 'Krona - ' + attributes[indexAttribute].displayName + ' - ' + focusNode.name; - dataWindow.document.title = title; - - nodeData = new Array(); - - if ( dataWindow && dataWindow.document && dataWindow.document.body != null ) - { - //var loadImage = document.createElement('img'); - //loadImage.src = "file://localhost/Users/ondovb/Krona/KronaTools/img/loading.gif"; - //loadImage.id = "loading"; - //loadImage.alt = "Loading..."; - //dataWindow.document.body.appendChild(loadImage); - dataWindow.document.body.innerHTML = - '<img id="loading" src="' + loadingImage + '" alt="Loading..."></img>'; - } - - var scripts = document.createElement('div'); - scripts.id = 'data'; - document.body.appendChild(scripts); - - var files = focusNode.getData(indexData, summary); - - var date = new Date(); - var time = date.getTime(); - - for ( var i = 0; i < files.length; i++ ) - { - var script = document.createElement('script'); - script.src = files[i] + '?' + time; - scripts.appendChild(script); - } - - waitForData(dataWindow, files.length, title, time, attributes[indexAttribute].postUrl, attributes[indexAttribute].postVar); - - return false; -} - -function showList(indexList, indexAttribute, summary) -{ - var list = focusNode.getList(indexList, summary); - - if ( attributes[indexAttribute].postUrl != undefined ) - { - post(attributes[indexAttribute].postUrl, attributes[indexAttribute].postVar, list.join(',')); - } - else - { - var dataWindow = window.open('', '_blank'); - - if ( true || navigator.appName == 'Microsoft Internet Explorer' ) // :( - { - dataWindow.document.open(); - dataWindow.document.write('<pre>' + list.join('\n') + '</pre>'); - dataWindow.document.close(); - } - else - { - var pre = document.createElement('pre'); - dataWindow.document.body.appendChild(pre); - pre.innerHTML = list; - } - - dataWindow.document.title = 'Krona - ' + attributes[indexAttribute].displayName + ' - ' + focusNode.name; - } -} - -function snapshot() -{ - svg = svgHeader(); - - resetKeyOffset(); - - snapshotMode = true; - - selectedNode.draw(false, true); - selectedNode.draw(true, true); - - if ( focusNode != 0 && focusNode != selectedNode ) - { - context.globalAlpha = 1; - focusNode.drawHighlight(true); - } - - if ( hueDisplayName && useHue() ) - { - drawLegendSVG(); - } - - snapshotMode = false; - - svg += svgFooter(); - - var snapshotWindow = window.open('', '_blank', '', 'replace=false'); - snapshotWindow.document.write('<html><body><a href="data:image/svg+xml,' + encodeURIComponent(svg) + '" download="snapshot.svg">Download Snapshot</a></html></body>'); - snapshotWindow.document.write(svg); -} - -function save() -{ - alert(document.body.innerHTML); -} - -function spacer() -{ - if ( snapshotMode ) - { - return '   '; - } - else - { - return ' '; - } -} - -function suppressEvent(e) -{ - e.cancelBubble = true; - if (e.stopPropagation) e.stopPropagation(); -} - -function svgFooter() -{ - return '</svg>'; -} - -function svgHeader() -{ - var patternWidth = fontSize * .6;//radius / 50; - - return '\ -<?xml version="1.0" standalone="no"?>\ -<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" \ - "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">\ -<svg width="' + imageWidth + '" height="' + imageHeight + '" version="1.1"\ - xmlns="http://www.w3.org/2000/svg">\ -<title>Krona (snapshot) - ' + -(datasets > 1 ? datasetNames[currentDataset] + ' - ' : '') + selectedNode.name + -'</title>\ -<defs>\ - <style type="text/css">\ - text {font-size: ' + fontSize + 'px; font-family: ' + fontFamily + '; dominant-baseline:central}\ - path {stroke-width:' + thinLineWidth * fontSize / 12 + ';}\ - path.wedge {stroke:none}\ - path.line {fill:none;stroke:black;}\ - line {stroke:black;stroke-width:' + thinLineWidth * fontSize / 12 + ';}\ - line.tick {stroke-width:' + thinLineWidth * fontSize / 6 + ';}\ - line.pattern {stroke-width:' + thinLineWidth * fontSize / 18 + ';}\ - circle {fill:none;stroke:black;stroke-width:' + thinLineWidth * fontSize / 12 + ';}\ - rect {stroke:black;stroke-width:' + thinLineWidth * fontSize / 12 + ';}\ - .highlight {stroke:black;stroke-width:'+ highlightLineWidth * fontSize / 12 + ';}\ - .searchHighlight {fill:rgb(255, 255, 100);stroke:none;}\ - </style>\ -<pattern id="hiddenPattern" patternUnits="userSpaceOnUse" \ -x="0" y="0" width="' + patternWidth + '" height="' + patternWidth + '">\ -<line class="pattern" x1="0" y1="0" x2="' + patternWidth / 2 + '" y2="' + patternWidth / 2 + '"/>\ -<line class="pattern" x1="' + patternWidth / 2 + '" y1="' + patternWidth + -'" x2="' + patternWidth + '" y2="' + patternWidth / 2 + '"/>\ -</pattern>\ -</defs>\ -'; -} - -function svgText(text, x, y, anchor, bold, color) -{ - if ( typeof(anchor) == 'undefined' ) - { - anchor = 'start'; - } - - if ( color == undefined ) - { - color = 'black'; - } - - return '<text x="' + x + '" y="' + y + - '" style="font-color:' + color + ';font-weight:' + (bold ? 'bold' : 'normal') + - '" text-anchor="' + anchor + '">' + text + '</text>'; -} - -function toggleKeys() -{ - if ( showKeys ) - { - keyControl.value = '…'; - showKeys = false; - } - else - { - keyControl.value = 'x'; - showKeys = true; - } - - updateKeyControl(); - - if ( progress == 1 ) - { - draw(); - } -} - -function update() -{ - if ( ! head ) - { - return; - } - - if ( mouseDown && focusNode != selectedNode ) - { - var date = new Date(); - - if ( date.getTime() - mouseDownTime > quickLookHoldLength ) - { - if ( focusNode.hasChildren() ) - { - expand(focusNode); - quickLook = true; - } - } - } - - if ( updateViewNeeded ) - { - resize(); - mouseX = -1; - mouseY = -1; - - collapse = collapseCheckBox.checked; - compress = true;//compressCheckBox.checked; - shorten = true;//shortenCheckBox.checked; - - checkSelectedCollapse(); - updateMaxAbsoluteDepth(); - - if ( focusNode.getCollapse() || focusNode.depth > maxAbsoluteDepth ) - { - setFocus(selectedNode); - } - else - { - setFocus(focusNode); - } - - updateView(); - - updateViewNeeded = false; - } - - var date = new Date(); - progress = (date.getTime() - tweenStartTime) / tweenLength; -// progress += .01; - - if ( progress >= 1 ) - { - progress = 1; - } - - if ( progress != progressLast ) - { - tweenFactor =// progress; - (1 / (1 + Math.exp(-tweenCurvature * (progress - .5))) - .5) / - (tweenMax - .5) / 2 + .5; - - if ( progress == 1 ) - { - snapshotButton.disabled = false; - zoomOut = false; - - //updateKeyControl(); - - if ( ! quickLook ) - { - //checkHighlight(); - } - - - if ( fpsDisplay ) - { - fpsDisplay.innerHTML = 'fps: ' + Math.round(tweenFrames * 1000 / tweenLength); - } - } - - draw(); - } - - progressLast = progress; -} - -function updateDatasetButtons() -{ - if ( datasets == 1 ) - { - return; - } - - var node = selectedNode ? selectedNode : head; - - datasetButtonLast.disabled = - node.attributes[magnitudeIndex][lastDataset] == 0; - - datasetButtonPrev.disabled = true; - datasetButtonNext.disabled = true; - - for ( var i = 0; i < datasets; i++ ) - { - var disable = node.attributes[magnitudeIndex][i] == 0; - - datasetDropDown.options[i].disabled = disable; - - if ( ! disable ) - { - if ( i != currentDataset ) - { - datasetButtonPrev.disabled = false; - datasetButtonNext.disabled = false; - } - } - } -} - -function updateDatasetWidths() -{ - if ( datasets > 1 ) - { - for ( var i = 0; i < datasets; i++ ) - { - context.font = fontBold; - var dim = context.measureText(datasetNames[i]); - datasetWidths[i] = dim.width; - } - } -} - -function updateKeyControl() -{ - if ( keys == 0 )//|| progress != 1 ) - { - keyControl.style.visibility = 'hidden'; - } - else - { - keyControl.style.visibility = 'visible'; - keyControl.style.right = margin + 'px'; - - if ( showKeys ) - { - keyControl.style.top = - imageHeight - - ( - keys * (keySize + keyBuffer) - - keyBuffer + - margin + - keyControl.clientHeight * 1.5 - ) + 'px'; - } - else - { - keyControl.style.top = - (imageHeight - margin - keyControl.clientHeight) + 'px'; - } - } -} - -function updateView() -{ - if ( selectedNode.depth > maxAbsoluteDepth - 1 ) - { - maxAbsoluteDepth = selectedNode.depth + 1; - } - - highlightedNode = selectedNode; - - angleFactor = 2 * Math.PI / (selectedNode.magnitude); - - maxPossibleDepth = Math.floor(gRadius / (fontSize * minRingWidthFactor)); - - if ( maxPossibleDepth < 4 ) - { - maxPossibleDepth = 4; - } - - var minRadiusInner = fontSize * 8 / gRadius; - var minRadiusFirst = fontSize * 6 / gRadius; - var minRadiusOuter = fontSize * 5 / gRadius; - - if ( .25 < minRadiusInner ) - { - minRadiusInner = .25; - } - - if ( .15 < minRadiusFirst ) - { - minRadiusFirst = .15; - } - - if ( .15 < minRadiusOuter ) - { - minRadiusOuter = .15; - } - - // visibility of nodes depends on the depth they are displayed at, - // so we need to set the max depth assuming they can all be displayed - // and iterate it down based on the deepest child node we can display - // - var maxDepth; - var newMaxDepth = selectedNode.getMaxDepth() - selectedNode.getDepth() + 1; - // - do - { - maxDepth = newMaxDepth; - - if ( ! compress && maxDepth > maxPossibleDepth ) - { - maxDepth = maxPossibleDepth; - } - - if ( compress ) - { - compressedRadii = new Array(maxDepth); - - compressedRadii[0] = minRadiusInner; - - var offset = 0; - - while - ( - lerp - ( - Math.atan(offset + 2), - Math.atan(offset + 1), - Math.atan(maxDepth + offset - 1), - minRadiusInner, - 1 - minRadiusOuter - ) - minRadiusInner > minRadiusFirst && - offset < 10 - ) - { - offset++; - } - - offset--; - - for ( var i = 1; i < maxDepth; i++ ) - { - compressedRadii[i] = lerp - ( - Math.atan(i + offset), - Math.atan(offset), - Math.atan(maxDepth + offset - 1), - minRadiusInner, - 1 - minRadiusOuter - ) - } - } - else - { - nodeRadius = 1 / maxDepth; - } - - newMaxDepth = selectedNode.maxVisibleDepth(maxDepth); - - if ( compress ) - { - if ( newMaxDepth <= maxPossibleDepth ) - { -// compress - } - } - else - { - if ( newMaxDepth > maxPossibleDepth ) - { - newMaxDepth = maxPossibleDepth; - } - } - } - while ( newMaxDepth < maxDepth ); - - maxDisplayDepth = maxDepth; - - lightnessFactor = (lightnessMax - lightnessBase) / (maxDepth > 8 ? 8 : maxDepth); - keys = 0; - - nLabelOffsets = new Array(maxDisplayDepth - 1); - labelOffsets = new Array(maxDisplayDepth - 1); - labelLastNodes = new Array(maxDisplayDepth - 1); - labelFirstNodes = new Array(maxDisplayDepth - 1); - - for ( var i = 0; i < maxDisplayDepth - 1; i++ ) - { - if ( compress ) - { - if ( i == maxDisplayDepth - 1 ) - { - nLabelOffsets[i] = 0; - } - else - { - var width = - (compressedRadii[i + 1] - compressedRadii[i]) * - gRadius; - - nLabelOffsets[i] = Math.floor(width / fontSize / 1.2); - - if ( nLabelOffsets[i] > 2 ) - { - nLabelOffsets[i] = min - ( - Math.floor(width / fontSize / 1.75), - 5 - ); - } - } - } - else - { - nLabelOffsets[i] = Math.max - ( - Math.floor(Math.sqrt((nodeRadius * gRadius / fontSize)) * 1.5), - 3 - ); - } - - labelOffsets[i] = Math.floor((nLabelOffsets[i] - 1) / 2); - labelLastNodes[i] = new Array(nLabelOffsets[i] + 1); - labelFirstNodes[i] = new Array(nLabelOffsets[i] + 1); - - for ( var j = 0; j <= nLabelOffsets[i]; j++ ) - { - // these arrays will allow nodes with neighboring labels to link to - // each other to determine max label length - - labelLastNodes[i][j] = 0; - labelFirstNodes[i][j] = 0; - } - } - - fontSizeText.innerHTML = fontSize; - fontNormal = fontSize + 'px ' + fontFamily; - context.font = fontNormal; - fontBold = 'bold ' + fontSize + 'px ' + fontFamily; - tickLength = fontSize * .7; - - head.setTargets(0); - - keySize = ((imageHeight - margin * 3) * 1 / 2) / keys * 3 / 4; - - if ( keySize > fontSize * maxKeySizeFactor ) - { - keySize = fontSize * maxKeySizeFactor; - } - - keyBuffer = keySize / 3; - - fontSizeLast = fontSize; - - if ( datasetChanged ) - { - datasetChanged = false; - } - else - { - datasetAlpha.start = 0; - } - - var date = new Date(); - tweenStartTime 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<count><val>94</val></count> - <node name="Mammalia"> - <rank><val>class</val></rank> - <count><val>94</val></count> - <node name="Euarchontoglires"> - <count><val>94</val></count> - <rank><val>superorder</val></rank> - <node name="Rodentia"> - <count><val>94</val></count> - <rank><val>order</val></rank> - <node name="Sciurognathi"> - <rank><val>suborder</val></rank> - <count><val>94</val></count> - <node name="Muridae"> - <rank><val>family</val></rank> - <count><val>94</val></count> - <node name="Murinae"> - <rank><val>subfamily</val></rank> - <count><val>94</val></count> - <node name="Rattus"> - <rank><val>genus</val></rank> - <count><val>94</val></count> - <members> - <vals><val>IA_1-296315</val><val>IA_1-322295</val></vals> - </members> - <unassigned><val>2</val></unassigned> - <node name="Rattus norvegicus"> - <members> - 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<vals><val>IA_1-79371</val><val>IA_1-84488</val><val>IA_1-270826</val><val>IA_1-285361</val><val>IA_1-93958</val><val>IA_1-99821</val></vals> - </members> - </node> - </node> - </node> - </node> - </node> - </node> - </node> -</node> - </krona> -</div></body></html>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/tax2.tax Fri Dec 18 16:16:12 2020 +0000 @@ -0,0 +1,18 @@ +IA_1-79371 591020 root Bacteria n n n Proteobacteria n n Gammaproteobacteria n n Enterobacteriales n n Enterobacteriaceae n n n Shigella n Shigella flexneri n 281604065 +IA_1-84488 591020 root Bacteria n n n Proteobacteria n n Gammaproteobacteria n n Enterobacteriales n n Enterobacteriaceae n n n Shigella n Shigella flexneri n 281604065 +IA_1-270826 591020 root Bacteria n n n Proteobacteria n n Gammaproteobacteria n n Enterobacteriales n n Enterobacteriaceae n n n Shigella n Shigella flexneri n 281604070 +IA_1-285361 591020 root Bacteria n n n Proteobacteria n n Gammaproteobacteria n n Enterobacteriales n n Enterobacteriaceae n n n Shigella n Shigella flexneri n 281604070 +IA_1-93958 591020 root Bacteria n n n Proteobacteria n n Gammaproteobacteria n n Enterobacteriales n n Enterobacteriaceae n n n Shigella n Shigella flexneri n 281604070 +IA_1-99821 591020 root Bacteria n n n Proteobacteria n n Gammaproteobacteria n n Enterobacteriales n n Enterobacteriaceae n n n Shigella n Shigella flexneri n 281604070 +IA_1-144417 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604077 +IA_1-278966 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604077 +IA_1-314709 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604077 +IA_1-324951 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604077 +IA_1-27817 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604153 +IA_1-95255 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604181 +IA_1-104173 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604186 +IA_1-135979 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604186 +IA_1-139090 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604186 +IA_1-139090 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604186 +IA_1-139090 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604186 +IA_1-144996 10116 root Eukaryota Metazoa n n Chordata Craniata Gnathostomata Mammalia n Euarchontoglires Rodentia Sciurognathi n Muridae Murinae n n Rattus n Rattus norvegicus n 281604186