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changeset 5:8661b2607b7e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmodeler commit 652ae30a67649b070efd62ba90159e079c5e7bd5
author iuc
date Wed, 03 May 2023 09:31:16 +0000
parents a9fb165808c8
children fbe22cb3c869
files macros.xml repeatmodeler.xml
diffstat 2 files changed, 2 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Thu Apr 20 08:49:13 2023 +0000
+++ b/macros.xml	Wed May 03 09:31:16 2023 +0000
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <macros>
     <token name="@TOOL_VERSION@">2.0.4</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
 
     <xml name="requirements">
         <requirement type="package" version="@TOOL_VERSION@">repeatmodeler</requirement>
--- a/repeatmodeler.xml	Thu Apr 20 08:49:13 2023 +0000
+++ b/repeatmodeler.xml	Wed May 03 09:31:16 2023 +0000
@@ -11,12 +11,7 @@
 
 &&
 
-## "RMBlast jobs will use 4 cores each"
-pa=\$(( (\${GALAXY_SLOTS:-1}+3)/4 ))
-
-&&
-
-RepeatModeler -database 'rmdb' -threads \$pa
+RepeatModeler -database 'rmdb' -threads \${GALAXY_SLOTS:-1}
     ]]></command>
     <inputs>
         <param type="data" name="input_file" format="fasta" label="Input genome fasta"/>