Mercurial > repos > cstrittmatter > ss2v110
diff setup.py @ 0:fc22ec8e924e draft
planemo upload commit 6b0a9d0f0ef4bdb0c2e2c54070b510ff28125f7a
| author | cstrittmatter |
|---|---|
| date | Tue, 21 Apr 2020 12:45:34 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/setup.py Tue Apr 21 12:45:34 2020 -0400 @@ -0,0 +1,30 @@ +import os, sys +from distutils.core import setup +from setuptools import find_packages + +def readme(): + with open('README.md') as f: + return f.read() + +setup(name='SeqSero2', + version=open("version.py").readlines()[-1].split()[-1].strip("\"'"), + description='Salmonella serotyping', + long_description=readme(), + classifiers=[ + 'Development Status :: 3 - Alpha', + 'License :: OSI Approved :: GNU General Public License v2 (GPLv2)', + 'Programming Language :: Python :: 3', + 'Topic :: Text Processing :: Linguistic', + ], + keywords='Salmonella serotyping bioinformatics WGS', + url='https://github.com/denglab/SeqSero2/', + author='Shaokang Zhang, Hendrik C Den-Bakker and Xiangyu Deng', + author_email='zskzsk@uga.edu, Hendrik.DenBakker@uga.edu, xdeng@uga.edu', + license='GPLv2', + scripts=["bin/deinterleave_fastq.sh","bin/Initial_Conditions.py","bin/SeqSero2_package.py","bin/SeqSero2_update_kmer_database.py"], + packages=[""], + include_package_data = True, + install_requires=['biopython==1.73'], + data_files=[("seqsero2_db",["seqsero2_db/antigens.pickle","seqsero2_db/H_and_O_and_specific_genes.fasta","seqsero2_db/invA_mers_dict","seqsero2_db/special.pickle"])], + zip_safe=False, +)