Mercurial > repos > damion > ffp_phylogeny

diff ffp_phylogeny.py @ 3:79a4a86981d3 draft default tip

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author damion
date Thu, 23 Apr 2015 17:47:39 -0400
parents 671667722d3d
children
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--- a/ffp_phylogeny.py	Fri Mar 20 14:27:19 2015 -0400
+++ b/ffp_phylogeny.py	Thu Apr 23 17:47:39 2015 -0400
@@ -245,7 +245,7 @@
 			help='Enables pearson correlation coefficient matrix and any of the binary distance measures to be turned into similarity matrixes.')
 		
 		parser.add_option('-f', '--filter', type='choice', dest='filter', default='none',
-			choices=['none','f','n','e','freq','norm','evd'],
+			choices=['none','count','f','n','e','freq','norm','evd'],
 			help='Choice of [f=raw frequency|n=normal|e=extreme value (Gumbel)] distribution: Features are trimmed from the data based on lower/upper cutoff points according to the given distribution.')
 
 		parser.add_option('-L', '--lower', type='float', dest='lower',