# HG changeset patch
# User davidecangelosi
# Date 1559129570 14400
# Node ID 6ae13912ab0352036bd505c644a93478229d1dfe
# Parent  465e643e1ea11eaec3a66fb5a00a7b47a736cb7c
planemo upload for repository https://github.com/igg-molecular-biology-lab/pipe-t.git commit a642a9310fd2d16488b42aef5e0cde8124e978e3

diff -r 465e643e1ea1 -r 6ae13912ab03 pipe-t.R
--- a/pipe-t.R	Wed May 29 06:40:43 2019 -0400
+++ b/pipe-t.R	Wed May 29 07:32:50 2019 -0400
@@ -813,7 +813,7 @@
   res = 300,            # 300 pixels per inch
   pointsize = 8)
  
-  plotCtBoxes(normalizedDataset, ylim=c(min(exprs(normalizedDataset), na.rm = TRUE),max(exprs(normalizedDataset),cex.lab=3, cex.axis = 2,stratify=NULL, xlab = "Samples", ylab="DeltaCt", mar = c(8,8,8,8), names=as.character(seq(1, ncol(normalizedDataset), 1)))       # smaller font size
+  plotCtBoxes(normalizedDataset, ylim=c(min(exprs(normalizedDataset), na.rm = TRUE),max(exprs(normalizedDataset), na.rm = TRUE)),cex.lab=3, cex.axis = 2,stratify=NULL, xlab = "Samples", ylab="DeltaCt", mar = c(8,8,8,8), names=as.character(seq(1, ncol(normalizedDataset), 1)))       # smaller font size
 dev.off()
 
 ################################################## Filtering based on number of NAs##################################################