# HG changeset patch # User davidecangelosi # Date 1558709345 14400 # Node ID 81f51d7221021ef89073e6fc1939f164548ecec3 # Parent 254114751c2e34da7bcb0ab76c131b47925d36be planemo upload for repository https://github.com/igg-molecular-biology-lab/pipe-t.git commit e398b5c7a84d650a355ab3a7fbff2757f7a1ca78 diff -r 254114751c2e -r 81f51d722102 pipe-t.R --- a/pipe-t.R Fri May 24 10:15:57 2019 -0400 +++ b/pipe-t.R Fri May 24 10:49:05 2019 -0400 @@ -352,7 +352,7 @@ column.info <- switch(format, EDS = list(flag="EXPFAIL", feature="Target.Name", position="Well.Position", Ct="CT"), plain = list(flag = 4, feature = 6, type = 7, position = 3, Ct = 8), #SDS = list(flag = 4,feature = 6, type = 7, position = 3, Ct = 8), - SDS = list(flag = "Omit",feature = "Detector", type = "Task", position = "Pos", Ct = "Avg.Ct"), + SDS = list(flag = "Omit",feature = "Detector", type = "Task", Ct = "Avg.Ct"), LightCycler = list(feature = "Name", position = "Pos", Ct = "Cp"), CFX = list(feature = "Content", position = "Well", Ct = "Cq.Mean"), OpenArray = list(flag = "ThroughHole.Outlier",