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Metadata-Version: 1.0
Name: weblogo
Version: 3.0
Summary: WebLogo3 : Sequence Logos Redrawn
Home-page: http://code.google.com/p/weblogo/
Author: Gavin Crooks
Author-email: [e-mail]
License: UNKNOWN
Download-URL: http://weblogo.googlecode.com/svn/dist/weblogo-3.0.tar.gz
Description: 
        WebLogo (http://code.google.com/p/weblogo/) is a tool for creating sequence
        logos from biological sequence alignments.  It can be run on the command line,
        as a standalone webserver, as a CGI webapp, or as a python library.
        
        The main WebLogo webserver is located at http://bespoke.lbl.gov/weblogo/
        
        Please consult the manual for installation instructions and more information:
        (Also located in the weblogolib/htdocs subdirectory.)
        
        http://bespoke.lbl.gov/weblogo/manual.html
        
        For help on the command line interface run
        ./weblogo --help
        
        To build a simple logo run
        ./weblogo  < cap.fa > logo0.eps
        
        To run as a standalone webserver at localhost:8080
        ./weblogo --server
        
        To create a logo in python code:
        >>> from weblogolib import *
        >>> fin = open('cap.fa')
        >>> seqs = read_seq_data(fin)
        >>> data = LogoData.from_seqs(seqs)
        >>> options = LogoOptions()
        >>> options.title = "A Logo Title"
        >>> format = LogoFormat(data, options)
        >>> fout = open('cap.eps', 'w')
        >>> eps_formatter( data, format, fout)
        
        
        -- Distribution and Modification --
        This package is distributed under the new BSD Open Source License.
        Please see the LICENSE.txt file for details on copyright and licensing.
        The WebLogo source code can be downloaded from
        http://code.google.com/p/weblogo/
        
        WebLogo requires Python 2.3, 2.4 or 2.5, the corebio python toolkit for
        computational biology (http://code.google.com/p/corebio), and the python
        array package 'numpy' (http://www.scipy.org/Download)
        
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Topic :: Software Development :: Libraries
Classifier: Topic :: Software Development :: Libraries :: Python Modules