Mercurial > repos > davidvanzessen > argalaxy_tools
annotate igparse.xml @ 7:54f6756bacb1 draft
Uploaded
author | davidvanzessen |
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date | Fri, 16 Dec 2016 09:01:40 -0500 |
parents | afe85eb6572e |
children |
rev | line source |
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0 | 1 <tool id="igblastparser_igg" name="igBLASTparser" version="0.2.0"> |
2 <description> </description> | |
3 <command interpreter="perl"> | |
4 igblastparser/igparse.pl $input 0 2>/dev/null | grep -v "D:" | cut -f2- > $output | |
5 </command> | |
6 <inputs> | |
7 <param name="input" type="data" format="text" label="igBLASTn report"/> | |
8 </inputs> | |
9 <outputs> | |
10 <data name="output" format="tabular" label="${input.name}-parsed" /> | |
11 </outputs> | |
12 <help> | |
13 Step 2 of the Immune Repertoire tools, extracts the relevant information needed from the reports generated by igblast (Step 1) | |
14 </help> | |
15 </tool> |