Mercurial > repos > davidvanzessen > argalaxy_tools
diff report_clonality/naive_junction.htm @ 52:124b7fd92a3e draft
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author | davidvanzessen |
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date | Thu, 25 Feb 2021 13:36:15 +0000 |
parents | 4d2a8f98a502 |
children | 81b3eb11ed2c |
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--- a/report_clonality/naive_junction.htm Thu Aug 08 07:40:36 2019 -0400 +++ b/report_clonality/naive_junction.htm Thu Feb 25 13:36:15 2021 +0000 @@ -1,206 +1,206 @@ -<html xmlns:v="urn:schemas-microsoft-com:vml" -xmlns:o="urn:schemas-microsoft-com:office:office" -xmlns:w="urn:schemas-microsoft-com:office:word" -xmlns:m="http://schemas.microsoft.com/office/2004/12/omml" -xmlns="http://www.w3.org/TR/REC-html40"> - -<head> -<meta http-equiv=Content-Type content="text/html; charset=windows-1252"> -<meta name=ProgId content=Word.Document> -<meta name=Generator content="Microsoft Word 14"> -<meta name=Originator content="Microsoft Word 14"> -<link rel=File-List href="Junction%20analysis%20tab_files/filelist.xml"> -<link rel=themeData href="Junction%20analysis%20tab_files/themedata.thmx"> -<style> -<!-- - /* Font Definitions */ - @font-face - {font-family:Calibri; - panose-1:2 15 5 2 2 2 4 3 2 4; - mso-font-charset:0; - mso-generic-font-family:swiss; - mso-font-pitch:variable; - mso-font-signature:-536870145 1073786111 1 0 415 0;} - /* Style Definitions */ - p.MsoNormal, li.MsoNormal, div.MsoNormal - {mso-style-unhide:no; 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-line-height:115%;font-family:"Times New Roman","serif"'>Tables:</span></b></p> - -<p class=MsoNormal style='text-align:justify'><span style='font-size:12.0pt; -line-height:115%;font-family:"Times New Roman","serif"'>The unique -rearrangements are separated in sequences that contain <span class=GramE>both a</span> -V, D and J gene and sequences that contain only a V and J gene.</span></p> - -<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: -justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt; -font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Productive mean -tables<o:p></o:p></span></u></p> - -<p class=MsoNormal style='text-align:justify'><span class=GramE><span -style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports -for each donor the number of productive sequences and the mean number of -deletions, N-nucleotides and P-nucleotides.</span></span><span -style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'> -For explanation about the different deletions and N and P nucleotides see -figure above. </span></p> - -<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: -justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt; 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+line-height:115%;font-family:"Times New Roman","serif"'>Tables:</span></b></p> + +<p class=MsoNormal style='text-align:justify'><span style='font-size:12.0pt; +line-height:115%;font-family:"Times New Roman","serif"'>The unique +rearrangements are separated in sequences that contain <span class=GramE>both a</span> +V, D and J gene and sequences that contain only a V and J gene.</span></p> + +<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: +justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt; +font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Productive mean +tables<o:p></o:p></span></u></p> + +<p class=MsoNormal style='text-align:justify'><span class=GramE><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports +for each donor the number of productive sequences and the mean number of +deletions, N-nucleotides and P-nucleotides.</span></span><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'> +For explanation about the different deletions and N and P nucleotides see +figure above. </span></p> + +<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: +justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt; +font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Unproductive +mean table<o:p></o:p></span></u></p> + +<p class=MsoNormal style='text-align:justify'><span class=GramE><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports +for each donor the number of unproductive sequences and the mean number of +deletions, N-nucleotides and P-nucleotides.</span></span><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'> +For explanation about the different deletions and N and P nucleotides see +figure above. </span></p> + +<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: +justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt; +font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Productive +median table<o:p></o:p></span></u></p> + +<p class=MsoNormal style='text-align:justify'><span class=GramE><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports +for each donor the number of productive sequences and the median number of +deletions, N-nucleotides and P-nucleotides.</span></span><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'> +For explanation about the different deletions and N and P nucleotides see +figure above. </span></p> + +<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: +justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt; +font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Unproductive +median table<o:p></o:p></span></u></p> + +<p class=MsoNormal style='text-align:justify'><span class=GramE><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports +for each donor the number of unproductive sequences and the median number of +deletions, N-nucleotides and P-nucleotides.</span></span><span +style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'> +For explanation about the different deletions and N and P nucleotides see +figure above. </span></p> + +<p class=MsoNormal> </p> + +</div> + +</body> + +</html>