Mercurial > repos > davidvanzessen > change_o
diff makedb.xml @ 0:183edf446dcf draft default tip
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| author | davidvanzessen |
|---|---|
| date | Mon, 17 Jul 2017 07:44:27 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/makedb.xml Mon Jul 17 07:44:27 2017 -0400 @@ -0,0 +1,31 @@ +<tool id="change_o_makdedb_galaxy" name="MakeDB" version="1.0"> + <description>Change-O</description> + <command interpreter="bash"> + makedb.sh $input $noparse $scores $regions $out_file + </command> + <inputs> + <param name="input" type="data" label="Input IMGT zip file" /> + <param name="noparse" type="select" label="No parse" help="Specify if input IDs should not be parsed to add new columns to database." > + <option value="true">True</option> + <option value="false" selected="true">False</option> + </param> + <param name="scores" type="select" label="Scores" help="Specify if alignment score metrics should be included in the output." > + <option value="true">True</option> + <option value="false" selected="true">False</option> + </param> + <param name="regions" type="select" label="Regions" help="Specify if IMGT framework and CDR regions should be included in the output." > + <option value="true">True</option> + <option value="false" selected="true">False</option> + </param> + </inputs> + <outputs> + <data format="tabular" name="out_file" label = "Change-o DB ${input.name}"/> + </outputs> + <citations> + <citation type="doi">10.1093/bioinformatics/btv359</citation> + </citations> + <help> + + + </help> +</tool>