Mercurial > repos > davidvanzessen > mutation_analysis
comparison tool_dependencies.xml @ 0:8a5a2abbb870 draft default tip
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author | davidvanzessen |
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date | Mon, 29 Aug 2016 05:36:10 -0400 |
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-1:000000000000 | 0:8a5a2abbb870 |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <set_environment version="1.0"> | |
4 </set_environment> | |
5 | |
6 <package name="blastn" version="1.0"> | |
7 <install version="1.0"> | |
8 <actions> | |
9 <action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/ncbi-blast-2.2.30+-x64-linux.tar.gz</action> | |
10 <action type="move_file"> | |
11 <source>bin/blastn</source> | |
12 <destination>$INSTALL_DIR</destination> | |
13 </action> | |
14 <action type="set_environment"> | |
15 <environment_variable name="BLASTN_DIR" action="set_to">$INSTALL_DIR</environment_variable> | |
16 </action> | |
17 </actions> | |
18 </install> | |
19 <readme> | |
20 downloads blast (ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/ncbi-blast-2.2.30+-x64-linux.tar.gz) and keeps the blastn executable | |
21 </readme> | |
22 </package> | |
23 </tool_dependency> | |
24 |