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32 </style>
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33
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34 <div class=WordSection1>
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35
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36 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><span lang=EN-GB
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37 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Table showing
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38 the number of sequences identified for each samples and the number of sequences
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39 in which no MID tag could be matched. In addition, multiple files can be
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40 downloaded for each sample.</span></p>
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41
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42 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
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43 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>FASTQ:</span></u><span
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44 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
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45 Downloads a FASTQ file with all the sequences that are linked to the sample.
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46 Sequences have not been trimmed. </span></p>
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47
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48 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
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49 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>FASTA:</span></u><span
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50 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
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51 Downloads a FASTA file with all the sequences that are linked to the sample.
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52 Sequences have not been trimmed. </span></p>
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53
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54 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
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55 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Trimmed FASTA:</span></u><span
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56 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
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57 Downloads a trimmed FASTA file with all the sequences that are linked to the
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58 sample. Sequences are trimmed according to the settings entered at the barcodes
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59 section of the main page of the demultiplex tool. </span></p>
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60
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61 <p class=MsoNoSpacingCxSpLast style='text-align:justify'><u><span lang=EN-GB
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62 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>FASTQC:</span></u><span
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63 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'> The
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64 sequences of each individual sample automatically is analysed using FASTQC.
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65 Clicking “Report” opens a new page containing all quality control results of
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66 the analysis of FASTQC. </span><span style='font-size:12.0pt;font-family:"Times New Roman","serif";
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67 color:black'>(</span><span lang=EN-GB><a
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68 href="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/" target="_blank"><span
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69 lang=EN-US style='font-size:12.0pt;font-family:"Times New Roman","serif";
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70 color:#303030;text-decoration:none'>http://www.bioinformatics.babraham.ac.uk/projects/fastqc/</span></a></span><span
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71 style='font-size:12.0pt;font-family:"Times New Roman","serif";color:black'>)</span></p>
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72
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73 <p class=MsoNormal> </p>
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74
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75 </div>
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