comparison results_footer.html @ 2:44ec2a1009fc draft

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author davidvanzessen
date Wed, 21 Dec 2016 10:23:19 -0500
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35
36 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><span lang=EN-GB
37 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Table showing
38 the number of sequences identified for each samples and the number of sequences
39 in which no MID tag could be matched. In addition, multiple files can be
40 downloaded for each sample.</span></p>
41
42 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
43 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>FASTQ:</span></u><span
44 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
45 Downloads a FASTQ file with all the sequences that are linked to the sample.
46 Sequences have not been trimmed. </span></p>
47
48 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
49 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>FASTA:</span></u><span
50 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
51 Downloads a FASTA file with all the sequences that are linked to the sample.
52 Sequences have not been trimmed. </span></p>
53
54 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><u><span lang=EN-GB
55 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Trimmed FASTA:</span></u><span
56 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
57 Downloads a trimmed FASTA file with all the sequences that are linked to the
58 sample. Sequences are trimmed according to the settings entered at the barcodes
59 section of the main page of the demultiplex tool. </span></p>
60
61 <p class=MsoNoSpacingCxSpLast style='text-align:justify'><u><span lang=EN-GB
62 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>FASTQC:</span></u><span
63 lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'> The
64 sequences of each individual sample automatically is analysed using FASTQC.
65 Clicking “Report” opens a new page containing all quality control results of
66 the analysis of FASTQC. </span><span style='font-size:12.0pt;font-family:"Times New Roman","serif";
67 color:black'>(</span><span lang=EN-GB><a
68 href="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/" target="_blank"><span
69 lang=EN-US style='font-size:12.0pt;font-family:"Times New Roman","serif";
70 color:#303030;text-decoration:none'>http://www.bioinformatics.babraham.ac.uk/projects/fastqc/</span></a></span><span
71 style='font-size:12.0pt;font-family:"Times New Roman","serif";color:black'>)</span></p>
72
73 <p class=MsoNormal>&nbsp;</p>
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