Mercurial > repos > davidvanzessen > shm_csr

comparison wrapper.sh @ 30:33a7c49d48a7 draft

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Uploaded
author davidvanzessen
date Mon, 12 Dec 2016 05:19:58 -0500
parents 80c4eebf7bc9
children fe44a905aee9
comparison
equal deleted inserted replaced
29:80c4eebf7bc9 30:33a7c49d48a7
408 then 408 then
409 echo "<img src='aa_histogram_IGE.png'/><br />" >> $output 409 echo "<img src='aa_histogram_IGE.png'/><br />" >> $output
410 fi 410 fi
411 411
412 412
413 if [ -e $outdir/baseline.png ] 413 if [ -e $outdir/baseline.pdf ]
414 then 414 then
415 echo "<embed src='baseline.pdf' width='700px' height='1000px'>" >> $output 415 echo "<embed src='baseline.pdf' width='700px' height='1000px'>" >> $output
416 fi 416 fi
417 417
418 if [ -e $outdir/baseline_IGA.png ] 418 if [ -e $outdir/baseline_IGA.pdf ]
419 then 419 then
420 echo "<embed src='baseline_IGA.pdf' width='700px' height='1000px'>" >> $output 420 echo "<embed src='baseline_IGA.pdf' width='700px' height='1000px'>" >> $output
421 fi 421 fi
422 422
423 if [ -e $outdir/baseline_IGG.png ] 423 if [ -e $outdir/baseline_IGG.pdf ]
424 then 424 then
425 echo "<embed src='baseline_IGG.pdf' width='700px' height='1000px'>" >> $output 425 echo "<embed src='baseline_IGG.pdf' width='700px' height='1000px'>" >> $output
426 fi 426 fi
427 427
428 if [ -e $outdir/baseline_IGM.png ] 428 if [ -e $outdir/baseline_IGM.pdf ]
429 then 429 then
430 echo "<embed src='baseline_IGM.pdf' width='700px' height='1000px'>" >> $output 430 echo "<embed src='baseline_IGM.pdf' width='700px' height='1000px'>" >> $output
431 fi 431 fi
432 432
433 if [ -e $outdir/baseline_IGE.png ] 433 if [ -e $outdir/baseline_IGE.pdf ]
434 then 434 then
435 echo "<embed src='baseline_IGE.pdf' width='700px' height='1000px'>" >> $output 435 echo "<embed src='baseline_IGE.pdf' width='700px' height='1000px'>" >> $output
436 fi 436 fi
437 437
438 echo "</div>" >> $output #antigen selection tab end 438 echo "</div>" >> $output #antigen selection tab end
580 580
581 echo "<tr><td colspan='2' style='background-color:#E0E0E0;'>Transition Tables</td></tr>" >> $output 581 echo "<tr><td colspan='2' style='background-color:#E0E0E0;'>Transition Tables</td></tr>" >> $output
582 echo "<tr><td>The data for the 'all' transition plot</td><td><a href='transitions_all_sum.txt' download='transitions_all_sum.txt' >Download</a></td></tr>" >> $output 582 echo "<tr><td>The data for the 'all' transition plot</td><td><a href='transitions_all_sum.txt' download='transitions_all_sum.txt' >Download</a></td></tr>" >> $output
583 echo "<tr><td>The data for the 'IGA' transition plot</td><td><a href='transitions_IGA_sum.txt' download='transitions_all_sum.txt' >Download</a></td></tr>" >> $output 583 echo "<tr><td>The data for the 'IGA' transition plot</td><td><a href='transitions_IGA_sum.txt' download='transitions_all_sum.txt' >Download</a></td></tr>" >> $output
584 echo "<tr><td>The data for the 'IGA1' transition plot</td><td><a href='transitions_IGA1_sum.txt' download='transitions_IGA1_sum.txt' >Download</a></td></tr>" >> $output 584 echo "<tr><td>The data for the 'IGA1' transition plot</td><td><a href='transitions_IGA1_sum.txt' download='transitions_IGA1_sum.txt' >Download</a></td></tr>" >> $output
585 echo "<tr><td>The data for the 'IGA1' transition plot</td><td><a href='transitions_IGA2_sum.txt' download='transitions_IGA2_sum.txt' >Download</a></td></tr>" >> $output 585 echo "<tr><td>The data for the 'IGA2' transition plot</td><td><a href='transitions_IGA2_sum.txt' download='transitions_IGA2_sum.txt' >Download</a></td></tr>" >> $output
586 echo "<tr><td>The data for the 'IGG' transition plot</td><td><a href='transitions_IGG_sum.txt' download='transitions_IGG_sum.txt' >Download</a></td></tr>" >> $output 586 echo "<tr><td>The data for the 'IGG' transition plot</td><td><a href='transitions_IGG_sum.txt' download='transitions_IGG_sum.txt' >Download</a></td></tr>" >> $output
587 echo "<tr><td>The data for the 'IGG1' transition plot</td><td><a href='transitions_IGG1_sum.txt' download='transitions_IGG1_sum.txt' >Download</a></td></tr>" >> $output 587 echo "<tr><td>The data for the 'IGG1' transition plot</td><td><a href='transitions_IGG1_sum.txt' download='transitions_IGG1_sum.txt' >Download</a></td></tr>" >> $output
588 echo "<tr><td>The data for the 'IGG2' transition plot</td><td><a href='transitions_IGG2_sum.txt' download='transitions_IGG2_sum.txt' >Download</a></td></tr>" >> $output 588 echo "<tr><td>The data for the 'IGG2' transition plot</td><td><a href='transitions_IGG2_sum.txt' download='transitions_IGG2_sum.txt' >Download</a></td></tr>" >> $output
589 echo "<tr><td>The data for the 'IGG3' transition plot</td><td><a href='transitions_IGG3_sum.txt' download='transitions_IGG3_sum.txt' >Download</a></td></tr>" >> $output 589 echo "<tr><td>The data for the 'IGG3' transition plot</td><td><a href='transitions_IGG3_sum.txt' download='transitions_IGG3_sum.txt' >Download</a></td></tr>" >> $output
590 echo "<tr><td>The data for the 'IGG4' transition plot</td><td><a href='transitions_IGG4_sum.txt' download='transitions_IGG4_sum.txt' >Download</a></td></tr>" >> $output 590 echo "<tr><td>The data for the 'IGG4' transition plot</td><td><a href='transitions_IGG4_sum.txt' download='transitions_IGG4_sum.txt' >Download</a></td></tr>" >> $output