Mercurial > repos > davidvanzessen > shm_csr

view README.md @ 68:7b9481fa4a70 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author davidvanzessen
date Tue, 29 Jan 2019 04:41:57 -0500
parents ba33b94637ca
children 58d2377b507d
line wrap: on
line source

# SHM CSR

Somatic hypermutation and class switch recombination pipeline 

# Dependencies
--------------------
[Python 2.7](https://www.python.org/)  
[Change-O](https://changeo.readthedocs.io/en/version-0.4.4/)  
[Baseline](http://selection.med.yale.edu/baseline/)  
[R data.table](https://cran.r-project.org/web/packages/data.table/data.table.pdf)
[R ggplot2](https://cran.r-project.org/web/packages/ggplot2/ggplot2.pdf)
[R reshape2](https://cran.r-project.org/web/packages/reshape/reshape.pdf)