diff srf2fastq/io_lib-1.12.2/io_lib/mach-io.h @ 0:d901c9f41a6a default tip

Migrated tool version 1.0.1 from old tool shed archive to new tool shed repository

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/srf2fastq/io_lib-1.12.2/io_lib/mach-io.h	Tue Jun 07 17:48:05 2011 -0400
@@ -0,0 +1,140 @@
+/*
+ * Copyright (c) Medical Research Council 1994. All rights reserved.
+ *
+ * Permission to use, copy, modify and distribute this software and its
+ * documentation for any purpose is hereby granted without fee, provided that
+ * this copyright and notice appears in all copies.
+ *
+ * This file was written by James Bonfield, Simon Dear, Rodger Staden,
+ * as part of the Staden Package at the MRC Laboratory of Molecular
+ * Biology, Hills Road, Cambridge, CB2 2QH, United Kingdom.
+ *
+ * MRC disclaims all warranties with regard to this software.
+ */
+
+#ifndef _mach_io_h
+#define _mach_io_h
+/*
+ * Machine independant io
+ * For reading and writing to big-endian and little-endian files
+ *
+ * Routines available:
+ *     be_write_int_1()
+ *     be_write_int_2()
+ *     be_write_int_4()
+ *     be_read_int_1()
+ *     be_read_int_2()
+ *     be_read_int_4()
+ *     le_write_int_1()
+ *     le_write_int_2()
+ *     le_write_int_4()
+ *     le_read_int_1()
+ *     le_read_int_2()
+ *     le_read_int_4()
+ *
+ * All routine return:
+ *    0 - an error has occurred during io operation
+ *    1 - value successfully read or written
+ */
+
+#include <stdio.h>
+#include "io_lib/os.h"
+#include "io_lib/mFILE.h"
+
+#ifdef __cplusplus
+extern "C" {
+#endif
+
+/**********************************************************************/
+/* IO for big-endian files                                            */
+/**********************************************************************/
+
+/*
+ * Write a big-endian int1
+ */
+extern int be_write_int_1(mFILE *fp, uint1 *i1);
+
+/*
+ * Write a big-endian int2
+ */
+extern int be_write_int_2(mFILE *fp, uint2 *i2);
+
+/*
+ * Write a big-endian int4
+ */
+extern int be_write_int_4(mFILE *fp, uint4 *i4);
+
+/*
+ * Write a big-endian int8
+ */
+extern int be_write_int_8(mFILE *fp, uint8 *i8);
+
+/*
+ * Read a big-endian int1
+ */
+extern int be_read_int_1(mFILE *fp, uint1 *i1);
+
+/*
+ * Read a big-endian int2
+ */
+extern int be_read_int_2(mFILE *fp, uint2 *i2);
+
+/*
+ * Read a big-endian int4
+ */
+extern int be_read_int_4(mFILE *fp, uint4 *i4);
+
+/*
+ * Read a big-endian int8
+ */
+extern int be_read_int_8(mFILE *fp, uint8 *i8);
+
+/**********************************************************************/
+/* IO for little-endian files                                         */
+/**********************************************************************/
+
+/*
+ * Write a little-endian int1
+ */
+extern int le_write_int_1(mFILE *fp, uint1 *i1);
+
+/*
+ * Write a little-endian int2
+ */
+extern int le_write_int_2(mFILE *fp, uint2 *i2);
+
+/*
+ * Write a little-endian int4
+ */
+extern int le_write_int_4(mFILE *fp, uint4 *i4);
+
+/*
+ * Write a little-endian int8
+ */
+extern int le_write_int_8(mFILE *fp, uint8 *i8);
+
+/*
+ * Read a little-endian int1
+ */
+extern int le_read_int_1(mFILE *fp, uint1 *i1);
+
+/*
+ * Read a little-endian int2
+ */
+extern int le_read_int_2(mFILE *fp, uint2 *i2);
+
+/*
+ * Read a little-endian int4
+ */
+extern int le_read_int_4(mFILE *fp, uint4 *i4);
+
+/*
+ * Read a little-endian int8
+ */
+extern int le_read_int_8(mFILE *fp, uint8 *i8);
+
+#ifdef __cplusplus
+}
+#endif
+
+#endif /* _mach_io_h */