Mercurial > repos > dcouvin > getsequenceinfo

diff getSequenceInfo.sh @ 0:19ae17458c14 draft default tip

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author dcouvin
date Wed, 15 Sep 2021 21:35:09 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/getSequenceInfo.sh	Wed Sep 15 21:35:09 2021 +0000
@@ -0,0 +1,20 @@
+#!/bin/bash
+
+dir=$1
+availableKingdoms=$2
+assemblylevel=$3
+species=$4
+quantity=$5
+output=$6
+#enaFtpServor=$7
+
+directory=`dirname $0`
+
+
+
+perl $directory/getSequenceInfo.pl -directory $dir -k $availableKingdoms -l $assemblylevel -s $species -n $quantity -o $output 
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