comparison pmlst/tmp_pMLST/tmp/out_inchi2.xml @ 0:cfab64885f66 draft default tip

Uploaded
author dcouvin
date Mon, 06 Sep 2021 18:27:45 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:cfab64885f66
1 <?xml version="1.0"?>
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3 <BlastOutput>
4 <BlastOutput_program>blastn</BlastOutput_program>
5 <BlastOutput_version>BLASTN 2.11.0+</BlastOutput_version>
6 <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), &quot;A greedy algorithm for aligning DNA sequences&quot;, J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference>
7 <BlastOutput_db></BlastOutput_db>
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9 <BlastOutput_query-def>pSFO157</BlastOutput_query-def>
10 <BlastOutput_query-len>121239</BlastOutput_query-len>
11 <BlastOutput_param>
12 <Parameters>
13 <Parameters_expect>10</Parameters_expect>
14 <Parameters_sc-match>1</Parameters_sc-match>
15 <Parameters_sc-mismatch>-2</Parameters_sc-mismatch>
16 <Parameters_gap-open>0</Parameters_gap-open>
17 <Parameters_gap-extend>0</Parameters_gap-extend>
18 <Parameters_filter>m;</Parameters_filter>
19 </Parameters>
20 </BlastOutput_param>
21 <BlastOutput_iterations>
22 <Iteration>
23 <Iteration_iter-num>1</Iteration_iter-num>
24 <Iteration_query-ID>Query_1</Iteration_query-ID>
25 <Iteration_query-def>pSFO157</Iteration_query-def>
26 <Iteration_query-len>121239</Iteration_query-len>
27 <Iteration_hits>
28 </Iteration_hits>
29 <Iteration_stat>
30 <Statistics>
31 <Statistics_db-num>0</Statistics_db-num>
32 <Statistics_db-len>0</Statistics_db-len>
33 <Statistics_hsp-len>20</Statistics_hsp-len>
34 <Statistics_eff-space>701858010</Statistics_eff-space>
35 <Statistics_kappa>0.46</Statistics_kappa>
36 <Statistics_lambda>1.28</Statistics_lambda>
37 <Statistics_entropy>0.85</Statistics_entropy>
38 </Statistics>
39 </Iteration_stat>
40 <Iteration_message>No hits found</Iteration_message>
41 </Iteration>
42 </BlastOutput_iterations>
43 </BlastOutput>
44