Mercurial > repos > dcouvin > pmlst_v2
comparison pmlst/tmp_pMLST/tmp/out_inchi2.xml @ 0:cfab64885f66 draft default tip
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author | dcouvin |
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date | Mon, 06 Sep 2021 18:27:45 +0000 |
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-1:000000000000 | 0:cfab64885f66 |
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1 <?xml version="1.0"?> | |
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> | |
3 <BlastOutput> | |
4 <BlastOutput_program>blastn</BlastOutput_program> | |
5 <BlastOutput_version>BLASTN 2.11.0+</BlastOutput_version> | |
6 <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference> | |
7 <BlastOutput_db></BlastOutput_db> | |
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> | |
9 <BlastOutput_query-def>pSFO157</BlastOutput_query-def> | |
10 <BlastOutput_query-len>121239</BlastOutput_query-len> | |
11 <BlastOutput_param> | |
12 <Parameters> | |
13 <Parameters_expect>10</Parameters_expect> | |
14 <Parameters_sc-match>1</Parameters_sc-match> | |
15 <Parameters_sc-mismatch>-2</Parameters_sc-mismatch> | |
16 <Parameters_gap-open>0</Parameters_gap-open> | |
17 <Parameters_gap-extend>0</Parameters_gap-extend> | |
18 <Parameters_filter>m;</Parameters_filter> | |
19 </Parameters> | |
20 </BlastOutput_param> | |
21 <BlastOutput_iterations> | |
22 <Iteration> | |
23 <Iteration_iter-num>1</Iteration_iter-num> | |
24 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
25 <Iteration_query-def>pSFO157</Iteration_query-def> | |
26 <Iteration_query-len>121239</Iteration_query-len> | |
27 <Iteration_hits> | |
28 </Iteration_hits> | |
29 <Iteration_stat> | |
30 <Statistics> | |
31 <Statistics_db-num>0</Statistics_db-num> | |
32 <Statistics_db-len>0</Statistics_db-len> | |
33 <Statistics_hsp-len>20</Statistics_hsp-len> | |
34 <Statistics_eff-space>701858010</Statistics_eff-space> | |
35 <Statistics_kappa>0.46</Statistics_kappa> | |
36 <Statistics_lambda>1.28</Statistics_lambda> | |
37 <Statistics_entropy>0.85</Statistics_entropy> | |
38 </Statistics> | |
39 </Iteration_stat> | |
40 <Iteration_message>No hits found</Iteration_message> | |
41 </Iteration> | |
42 </BlastOutput_iterations> | |
43 </BlastOutput> | |
44 |