Mercurial > repos > dcouvin > resfinder4
comparison resfinder/db_pointfinder/helicobacter_pylori/rpoB.fsa @ 0:55051a9bc58d draft default tip
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| author | dcouvin |
|---|---|
| date | Mon, 10 Jan 2022 20:06:07 +0000 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:55051a9bc58d |
|---|---|
| 1 >rpoB | |
| 2 ATGTCAAAAAAAATTCCCCTAAAAAACCGCTTGAGAGCTGATTTTACAAAAACCCCAACAGATTTAGAAG | |
| 3 TCCCTAATTTATTATTATTACAACGAGACAGCTATGATTCTTTCTTGTATTCCAAAGATGGCAAAGAGAG | |
| 4 CGGGATTGAAAAGGTTTTTAAATCCATTTTCCCTATCCAAGATGAGCATAACCGCATCACTTTAGAATAT | |
| 5 GCGGGTTGCGAATTTGGCAAGTCTAAATACACCGTTAGAGAAGCGATGGAAAGGGGCATTACCTACTCTA | |
| 6 TCCCGCTTAAAATTAAAGTGCGCTTGATCTTGTGGGAAAAAGATACCAAAAGCGGCGAAAAGAACGGCAT | |
| 7 CAAGGATATTAAAGAACAAAGCATTTTCATTCGTGAGATCCCTTTGATGACAGAACGCACTTCATTTATT | |
| 8 ATCAATGGGGTGGAACGCGTGGTCGTCAATCAACTCCACAGAAGCCCCGGTGTGATTTTCAAAGAAGAAG | |
| 9 AGTCCAGCACTTCTTTAAACAAGCTCATTTACATAGGGCAAATCATCCCTGATAGGGGTTCGTGGTTGTA | |
| 10 TTTTGAATACGATTCTAAAGATGTTTTATACGCTCGTATCAATAAACGCCGTAAAGTGCCTGTTACTATT | |
| 11 TTATTCAGGGCGATGGATTATCAAAAACAAGACATTATCAAAATGTTCTACCCGCTTGTTAAAGTGCGTT | |
| 12 ATGAAAACGATAAATATTTGATCCCGTTTGCTTCATTAGACGCCAATCAAAGAATGGAATTTGACTTGAA | |
| 13 AGATCCTCAAGGCAAGATCATTCTTTTAGCGGGTAAAAAGCTCACTTCAAGAAAGATTAAAGAGCTTAAA | |
| 14 GAAAACCATTTAGAATGGGTGGAATACCCTATGGATATTTTACTCAATCGCCATTTAGCTGAGCCTGTTA | |
| 15 TGGTGGGGAAAGAAGTCTTATTAGACATGCTCACTCAGCTAGATAAAAACAAATTGGAAAAAATCCACGA | |
| 16 TTTAGGCGTGCAAGAATTTGTGATCATCAACGATCTAGCCTTAGGGCATGACGCTTCCATTATCCATTCT | |
| 17 TTTTCAGCCGATTCTGAGTCTTTGAAATTGCTCAAGCAAACTGAAAAAATTGATGATGAAAACGCTCTAG | |
| 18 CGGCGATTCGTATCCATAAGGTTATGAAGCCAGGCGATCCTGTTACGACTGAAGTGGCTAAGCAGTTTGT | |
| 19 CAAAAAACTTTTCTTTGATCCAGAACGCTATGATTTGACCATGGTGGGCCGCATGAAAATGAATCACAAG | |
| 20 TTAGGCTTGCATGTGCCTGATTACATTACGACTTTAACGCATGAAGATATTATCACCACCGTTAAATACC | |
| 21 TCATGAAAATCAAAAACAATCAGGGCAAGATTGATGACAGAGACCACTTGGGCAATCGTAGGATCAGAGC | |
| 22 CGTTGGGGAATTGTTGGCCAATGAATTGCATTCAGGCTTAGTGAAAATGCAAAAGACTATTAAAGACAAG | |
| 23 CTCACTACCATGAGCGGGGCTTTTGATTCGCTCATGCCCCATGACTTGGTCAATTCTAAAATGATCACAA | |
| 24 GCACCATCATGGAATTTTTCATGGGCGGTCAGCTCTCGCAATTTATGGATCAAACGAACCCCTTGAGTGA | |
| 25 GGTTACGCACAAGCGCCGCCTTTCAGCGCTCGGTGAAGGGGGGTTGGTGAAAGACAGGGTAGGGTTTGAA | |
| 26 GCTAGGGATGTGCACCCCACGCATTATGGCCGAATTTGCCCCATTGAGACCCCAGAAGGTCAAAATATCG | |
| 27 GTCTGATCAACACCCTTTCCACTTTCACAAGAGTGAATGATTTAGGCTTTATTGAAGCCCCTTATAAAAA | |
| 28 GGTTGTGGATGGCAAGGTAGTGGGTGAGACGATCTATTTGACCGCTATTCAAGAAGACAGCCACATCATC | |
| 29 GCTCCCGCAAGCACCCCCATTGATGAAGAGGGTAATATTTTAGGCGATTTGATTGAAACGCGTGTGGAAG | |
| 30 GCGAGATCGTTTTAAACGAAAAAAGCAAAGTAACCTTAATGGATTTAAGCTCTAGCATGCTAGTAGGGGT | |
| 31 AGCCGCATCGCTCATTCCTTTCTTAGAGCATGATGACGCCAACCGCGCCTTAATGGGGACTAACATGCAG | |
| 32 CGCCAAGCGGTGCCGTTATTAAAAAGCGACGCTCCCATTGTAGGCACAGGGATTGAAAAAATTATCGCTA | |
| 33 GGGATTCTTGGGGAGCGATCAAGGCCAATCGTGCAGGCGTTGTAGAAAAAATTGATTCTAAAAATATTTA | |
| 34 TATTTTAGGCGAAGGCAAAGAAGAGGTCTATATTGATGCGTATTCTTTGCAAAAAAACTTGCGCACCAAC | |
| 35 CAAAACACCAGTTTCAATCAAATCCCTATCGTTAAAGTGGGCGATAAAGTGGAAGCCGGGCAAATCATCG | |
| 36 CTGATGGCCCTAGCATGGATAGAGGCGAGTTAGCGTTAGGGAAAAATGTGCGCGTGGCGTTCATGCCTTG | |
| 37 GAATGGCTATAACTTTGAAGACGCGATCGTGGTGAGTGAGCGCATCACTAAAGATGATATTTTCACTTCC | |
| 38 ACCCACATTTATGAAAAAGAAGTGGATGCTAGGGAGCTTAAGCATGGCGTGGAAGAATTTACCGCTGACA | |
| 39 TTCCTGATGTGAAAGAAGAAGCGCTCGCTCATCTTGATGAAAGCGGGATCGTTAAAGTGGGCACTTATGT | |
| 40 GAGCGCTGGCATGATTTTAGTGGGTAAGACTTCTCCTAAAGGCGAGATTAAAGGCACGCCTGAAGAGCGA | |
| 41 CTTTTAAGGGCTATTTTTGGGGATAAAGCTGGGCATGTGGTCAATAAGAGTTTGTATTGCCCCCCCAGTT | |
| 42 TGGAAGGCACGGTGATTGATGTGAAAGTCTTCACTAAAAAAGGCTATGAGAAAGACGCGCGAGTTTTGAG | |
| 43 TGCGTATGAAGAAGAAAAAGCCAAGTTTGATATGGAGCATTTTGACCGCTTGATCATGCTCAACAGAGAA | |
| 44 GAATTGTTGCGCGTTAGTTCGCTCCTTTCTCAAGCGATTTTAGAAGAGCCTTTCAGCCATAATGGCAAGG | |
| 45 ATTATAAAGAAGGCGATCAAATCCCTAAAGAAGAAATCGCTTCCATCAACCGCTTCACTTTGGCTAGTTT | |
| 46 GGTGAAAAAATATTCTAAAGAAGTGCAAAACCACTATGAAATCACTAAAAACAATTTCTTAGAGCAAAAG | |
| 47 AAAGTTTTGGGCGAAGAGCATGAAGAAAAGCTTTCTATTTTAGAAAAAGATGATATTTTGCCTAATGGCG | |
| 48 TGATCAAAAAAGTCAAGCTCTATATCGCTACAAAACGAAAGCTTAAAGTGGGCGATAAAATGGCAGGAAG | |
| 49 GCATGGGAATAAAGGGATTGTGTCTAATATCGTGCCGGTTGCGGATATGCCTTATACCGCTGATGGCGAG | |
| 50 CCTGTAGATATTGTCTTAAACCCTTTAGGCGTGCCAAGCCGCATGAATATCGGGCAGATCTTAGAAATGC | |
| 51 ATTTAGGCTTAGTGGGGAAAGAATTTGGGAAGCAAATCGCTCGCATGCTAGAAGATAAAACCAAAGATTT | |
| 52 TGCCAAAGAATTGCGCGCTAAAATGCTAGAAATCGCTAACGCTATTAATGAAAAAGACCCCTTGACAATC | |
| 53 CATGCACTTGAGAGTTGTTCTGATGAAGAGCTTTTAGAATACGCAAAAGACTGGAGCAAGGGCGTTAAGA | |
| 54 TGGCTATCCCTGTGTTTGAAGGCATCTCGCAAGAAAAATTTTATAAGCTATTTGAATTGGCTAAGATCGC | |
| 55 TATGGATGGCAAAATGGATCTGTATGATGGGCGCACAGGCGAGAAAATGAGGGAGCGCGTGAATGTGGGC | |
| 56 TACATGTATATGATCAAACTCCACCATTTAGTGGATGAAAAAGTCCATGCCAGAAGCACGGGCCCTTATA | |
| 57 GCTTAGTAACGCACCAGCCCGTGGGAGGTAAAGCGCTCTTTGGGGGTCAAAGGTTTGGGGAAATGGAAGT | |
| 58 GTGGGCACTAGAAGCTTATGGTGCAGCGCACACTTTAAAAGAAATGCTTACCATTAAATCCGATGACATT | |
| 59 AGAGGCAGGGAGAACGCTTATAGGGCTATCGCTAAAGGTGAGCAAGTGGGCGAGAGTGAAATCCCTGAGA | |
| 60 CTTTCTATGTTTTGACTAAAGAATTGCAATCGCTCGCTTTGGATATTAATATTTTTGGGGACGATGTGGA | |
| 61 TGAAGATGGAGCGCCTAAACCCATTGTCATTAAAGAAGATGACAGGCCTAAAGACTTTAGCTCTTTCCAG | |
| 62 CTCACTCTAGCCAGCCCTGAAAAAATCCATTCTTGGAGTTATGGGGAAGTTAAAAAGCCAGAAACGATCA | |
| 63 ATTACCGCACCCTAAAACCTGAACGAGACGGCTTGTTTTGCATGAAAATCTTTGGCCCCACTAAAGATTA | |
| 64 TGAATGCTTGTGCGGTAAATACAAAAAGCCTCGCTTCAAAGACATTGGCACATGCGAAAAATGCGGCGTG | |
| 65 GCGATCACGCATTCCAAAGTCAGGCGTTTTAGAATGGGGCATATTGAATTGGCCACTCCTGTAGCGCATA | |
| 66 TTTGGTATGTCAATTCCTTGCCTAGCCGTATCGGCACGCTTTTGGGCGTTAAGATGAAAGACTTAGAGCG | |
| 67 CGTGTTGTATTATGAAGCTTATATCGTTAAAGAGCCAGGCGAAGCCGCTTATGACAATGAAGGCGCTAAG | |
| 68 CTTGTGATGAAATACGATATTTTGAATGAAGAGCAGTATCAAAATATCTCACGAAGATACGAAGACAGGG | |
| 69 GCTTTGTAGCGCAAATGGGCGGCCAAGCGATCAAGGATTTGCTAGAAGAAATTGATTTGATCACCTTATT | |
| 70 GCAGAGTTTGAAAGAAGAAGTGAAGGACACCAATTCCGATGCGAAAAAGAAAAAACTCATTAAGCGTTTG | |
| 71 AAAGTGGTAGAAAGCTTTTTAAATTCTGGCAACAGGCCTGAGTGGATGATGCTCACGGTTTTACCGGTAT | |
| 72 TGCCGCCGGATTTAAGGCCTTTAGTCGTGCTAGATGGCGGGAAGTTTGCGGTCAGCGATGTGAATGAATT | |
| 73 GTATCGTCGTGTCATCAATCGTAACCAACGCTTGAAACGCTTAATGGAGCTTGGGGCGCCAGAAATCATT | |
| 74 GTGCGCAATGAAAAAAGGATGTTGCAAGAAGCCGTGGATGTGCTTTTTGATAACGGCCGCAGCACCAATG | |
| 75 CGGTTAAAGGGGCTAACAAGCGCCCTTTAAAATCGCTCAGTGAAATCATTAAAGGCAAGCAAGGGCGTTT | |
| 76 CAGGCAAAACCTTTTAGGTAAGCGCGTGGATTTTTCAGGCAGAAGCGTAATTGTGGTTGGGCCTAATCTT | |
| 77 AAAATGGATGAGTGCGGATTGCCTAAAAACATGGCGTTAGAACTCTTCAAACCGCATTTGTTATCCAAGC | |
| 78 TTGAAGAAAGAGGCTATGCCACCACGCTCAAACAAGCTAAACGCATGATTGAGCAAAAAAGCAATGAAGT | |
| 79 GTGGGAGTGCTTGCAAGAAATCACAGAGGGGTATCCGGTGTTACTCAACCGTGCTCCTACCTTGCACAAG | |
| 80 CAATCCATTCAAGCGTTCCATCCCAAGCTTATTGACGGCAAAGCGATCCAATTGCACCCGTTAGTGTGTT | |
| 81 CAGCGTTCAACGCCGATTTTGACGGGGATCAAATGGCGGTGCATGTGCCTTTAAGCCAGGAAGCGATCGC | |
| 82 TGAATGCAAAGTGCTGATGCTAAGCTCTATGAATATCCTTTTGCCCGCTAGCGGTAAAGCCGTAGCCATT | |
| 83 CCTAGCCAGGATATGGTTTTAGGGCTTTATTATCTTTCTTTAGAAAAGAGCGGGGTCAAGGGCGAGCATA | |
| 84 AACTTTTTTCTAGCGTGAATGAAATCATCACCGCTATTGACACGAAAGAATTAGACATCCACGCAAAGAT | |
| 85 TAGGGTTTTAGATCAAGGGAATATTATCGCTACGAGCGCGGGGCGCATGATTATTAAGTCCATTTTGCCT | |
| 86 GATTTTATCCCTACTGATTTGTGGAATAGACCCATGAAGAAAAAAGATATTGGCGTGCTTGTGGATCATG | |
| 87 TGCATAAAGTCGGTGGTATCGGTATTACTGCAACCTTTTTGGATAATTTAAAAACGCTTGGCTTTAGGTA | |
| 88 TGCGACTAAGGCGGGTATTTCTATCTCTATGGAGGATATTATCACGCCAAAAGACAAGCAAAAAATGGTG | |
| 89 GAGAAAGCCAAAGTAGAGGTTAAAAAAATCCAGCAACAATACGATCAAGGGCTGCTCACTGACCAAGAGC | |
| 90 GTTACAATAAGATCATTGACACTTGGACTGAAGTCAATGACAAAATGAGTAAAGAAATGATGACCGCTAT | |
| 91 CGCGCAAGATAAAGAGGGCTTTAACTCTATTTATATGATGGCAGATAGCGGTGCAAGGGGTAGCGCGGCG | |
| 92 CAAATCCGTCAGCTTTCAGCGATGAGGGGCCTTATGACAAAGCCGGATGGCAGTATCATTGAAACGCCCA | |
| 93 TTATTTCTAACTTTAAAGAGGGGTTGAATGTCTTAGAATACTTTAACTCCACGCATGGAGCCAGAAAGGG | |
| 94 CTTAGCGGATACAGCGCTAAAAACAGCCAATGCGGGGTATTTGACAAGAAAGCTCATTGATGTTTCGCAA | |
| 95 AATGTCAAGGTGGTGTCTGATGATTGCGGCACGCATGAAGGGATTGAAATCACGGATATTGCGGTGGGGA | |
| 96 GTGAGCTGATTGAACCTTTAGAAGAGCGTATTTTTGGGCGTGTTTTATTAGAAGATGTGATCGATCCTAT | |
| 97 TACGAATGAAATCTTGCTTTATGCGGACACTTTGATTGATGAAGAGGGCGCTAAAAAAGTGGTTGAAGCC | |
| 98 GGGATTAAATCCATTACGATCCGCACCCCAGTAACTTGTAAAGCGCCAAAGGGTGTGTGCGCGAAATGCT | |
| 99 ATGGCTTGAATTTGGGCGAAGGCAAGATGAGTTATCCGGGTGAAGCGGTGGGCGTGGTAGCCGCGCAATC | |
| 100 TATCGGGGAGCCTGGAACGCAGCTCACTTTAAGGACTTTCCATGTGGGCGGAACAGCGAGCAGGAGTCAG | |
| 101 GATGAGCGCGAAATTGTAGCGAGCAAAGAAGGTTTTGTGCGTTTCTACAACCTTAGAACTTACACGAATA | |
| 102 AAGAGGGTAAAAACATTATCGCTAACCGCCGTAACGCTTCTATTTTAGTGGTAGAACCTAAGATTAAAGC | |
| 103 ACCTTTTGATGGGGAATTACGCATTGAAACGGTCTATGAAGAAGTCGTTGTGAGCGTGAAAAATGGCGAT | |
| 104 CAAGAAGCTAAATTTGTTTTAAGAAGAAGCGATATTGTCAAGCCAAGCGAATTGGCCGGCGTTGGCGGTA | |
| 105 AGATTGAAGGGAAAGTGTATTTGCCTTATGCTAGTGGGCATAAGGTGCATAAGGGGGGGAGTATCGCTGA | |
| 106 TATTATCCAAGAGGGCTGGAATGTGCCTAATCGCATCCCTTATGCGAGCGAATTGCTAGTCAAGGATAAT | |
| 107 GACCCTATTGCGCAAGATGTGTATGCTAAAGAAAAAGGCGCAATCAAATACTATGTGTTAGAGGCCAATC | |
| 108 ATTTAGAGCGCACCCATGGGATCAAAAAGGGCGATATTGTGAGCGAAAAAGGCTTGTTTGCGGTGATAGC | |
| 109 TGACGATAATGATAGGGAAGCCGCTCGCCATTATATCGCTAGGGGTTCTGAGATCTTGATTGATGATGAT | |
| 110 AGTGAAGTGAGCGCTAATAGCCTTATTTCTAAGCCTACTACAAATGCGTTAAGCACGATTGCCACATGGG | |
| 111 ATCCTTACAACACCCCTATCATTGCGGACTTTAAAGGCAGGGTGAGTTTTATGGACATTATCGCAGGGGT | |
| 112 TACGGTCGCTGAAAAAGAAGACGAAAATACCGGTATCACAAGCTTAGTGGTGAATGATTACATTCCAAGC | |
| 113 GGATACAAACCAAGCTTGTTTTTAGAGGGAGCTAATGGCGAAGAGGTGCGTTATTTCCTAGAGCCAAAAA | |
| 114 CTTCTATCGCTGTTAGCGATGGCTCTAGCGTGGAGCAGGCTGAAGTGTTAGCGAAAATCCCTAAAGCAAC | |
| 115 CGTTAAATCCAGGGATATTACTGGGGGTCTCCCAAGGGTTTCGGAACTCTTTGAAGCGAGAAAACCCAAG | |
| 116 CCTAAAGATGTGGCGATCCTTTCTGAAGTTGATGGGATTGTGAGTTTTGGCAAACCCATTCGCAATAAAG | |
| 117 AACACATCATCGTAACTTCTAAAGATGGCCGTTCCATGGATTATTTCGTGGATAAAGGCAAGCAAATTTT | |
| 118 AGTGCATGCCGATGAATTTGTGCATGCGGGAGAAGCGATGACGGATGGAGTGGTTTCAAGCCATGATATT | |
| 119 TTAAGAATTAGCGGCGAAAAAGAGCTTTATAAGTACATTGTGAGCGAAGTCCAGCAAGTGTATCGCAGGC | |
| 120 AGGGGGTAAGCATTGCGGACAAGCACATTGAAATCATTGTCTCTCAAATGTTAAGGCAAGTGCGTATTTT | |
| 121 AGACAGCGGGGATAGCAAGTTTATTGAAGGGGATTTAGTCAGTAAAAAACTCTTCAAAGAAGAAAACGCT | |
| 122 CGTGTGATCGCTTTAAAAGGCGAGCCAGCGATTGCTGAACCGGTGCTTTTAGGGATCACTAGAGCGGCTA | |
| 123 TTGGGAGCGATAGCATCATTTCAGCGGCCTCTTTCCAAGAAACGACTAAAGTTTTAACAGAAGCCAGTAT | |
| 124 CGCTATGAAAAAAGACTTTTTAGAAGATTTGAAAGAGAATGTGGTGTTGGGGAGGATGATCCCTGTGGGA | |
| 125 ACAGGCATGTATAAGAATAAAAAAATCGTGCTAAGAACGCTTGAAGATGACCCTAAATTTTGA | |
| 126 |