Mercurial > repos > deepakj > caret_tools_test
comparison tool_dependencies.xml @ 4:c557bd906e08 draft default tip
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| author | deepakj |
|---|---|
| date | Wed, 03 Feb 2016 07:01:29 -0500 |
| parents | |
| children |
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| 3:c59b266c1246 | 4:c557bd906e08 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="R" version="3.2.1"> | |
| 4 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 6 | |
| 7 <package name="caret-tools" version="1.0.0"> | |
| 8 <install version="1.0"> | |
| 9 | |
| 10 | |
| 11 <actions> | |
| 12 <action type="set_environment_for_install"> | |
| 13 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu"> | |
| 14 <package name="R" version="3.2.1" /> | |
| 15 </repository> | |
| 16 </action> | |
| 17 | |
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| 19 <action type="shell_command">R CMD INSTALL Rcpp_0.12.1.tar.gz?raw=true</action> | |
| 20 <action type="shell_command">cp $R_ROOT_DIR/lib/libblas.so.3gf $R_ROOT_DIR/lib/libblas.so.3</action> | |
| 21 <action type="shell_command">cp $R_ROOT_DIR/lib/libblas.so.3 $R_ROOT_DIR/lib/R/lib</action> | |
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| 24 | |
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| 27 | |
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| 83 <action type="shell_command">R CMD INSTALL modeltools_0.2-21.tar.gz?raw=true</action> | |
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| 93 <action type="shell_command">R CMD INSTALL pls_2.4-3.tar.gz?raw=true</action> | |
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| 95 <action type="shell_command">R CMD INSTALL plyr_1.8.3.tar.gz?raw=true</action> | |
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| 109 <action type="shell_command">R CMD INSTALL pamr_1.55.tar.gz?raw=true</action> | |
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| 111 <action type="shell_command">R CMD INSTALL superpc_1.09.tar.gz?raw=true</action> | |
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| 415 <action type="shell_command">R CMD INSTALL microbenchmark_1.4-2.tar.gz?raw=true</action> | |
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| 419 <action type="shell_command">R CMD INSTALL mitools_2.3.tar.gz?raw=true</action> | |
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| 421 <action type="shell_command">R CMD INSTALL mix_1.0-9.tar.gz?raw=true</action> | |
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| 423 <action type="shell_command">R CMD INSTALL mnormt_1.5-3.tar.gz?raw=true</action> | |
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| 425 <action type="shell_command">R CMD INSTALL mondate_0.10.01.02.tar.gz?raw=true</action> | |
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| 427 <action type="shell_command">R CMD INSTALL MPV_1.38.tar.gz?raw=true</action> | |
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| 429 <action type="shell_command">R CMD INSTALL TH.data_1.0-6.tar.gz?raw=true</action> | |
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| 431 <action type="shell_command">R CMD INSTALL multcomp_1.4-1.tar.gz?raw=true</action> | |
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| 433 <action type="shell_command">R CMD INSTALL multicool_0.1-7.tar.gz?raw=true</action> | |
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| 435 <action type="shell_command">R CMD INSTALL multtest_2.18.0.tar.gz?raw=true</action> | |
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| 437 <action type="shell_command">R CMD INSTALL MuMIn_1.15.1.tar.gz?raw=true</action> | |
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| 439 <action type="shell_command">R CMD INSTALL mvnormtest_0.1-9.tar.gz?raw=true</action> | |
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| 441 <action type="shell_command">R CMD INSTALL nor1mix_1.2-1.tar.gz?raw=true</action> | |
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| 443 <action type="shell_command">R CMD INSTALL nws_1.7.0.1.tar.gz?raw=true</action> | |
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| 445 <action type="shell_command">R CMD INSTALL oz_1.0-20.tar.gz?raw=true</action> | |
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| 447 <action type="shell_command">R CMD INSTALL pan_1.3.tar.gz?raw=true</action> | |
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| 449 <action type="shell_command">R CMD INSTALL PBSmapping_2.69.76.tar.gz?raw=true</action> | |
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| 453 <action type="shell_command">R CMD INSTALL penalized_0.9-45.tar.gz?raw=true</action> | |
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| 455 <action type="shell_command">R CMD INSTALL pkgKitten_0.1.3.tar.gz?raw=true</action> | |
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| 457 <action type="shell_command">R CMD INSTALL PKPDmodels_0.3.2.tar.gz?raw=true</action> | |
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| 459 <action type="shell_command">R CMD INSTALL plm_1.4-0.tar.gz?raw=true</action> | |
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| 461 <action type="shell_command">R CMD INSTALL png_0.1-7.tar.gz?raw=true</action> | |
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| 463 <action type="shell_command">R CMD INSTALL scatterplot3d_0.3-36.tar.gz?raw=true</action> | |
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| 465 <action type="shell_command">R CMD INSTALL poLCA_1.4.1.tar.gz?raw=true</action> | |
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| 467 <action type="shell_command">R CMD INSTALL polspline_1.1.12.tar.gz?raw=true</action> | |
| 468 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/sfsmisc_1.0-28.tar.gz?raw=true</action> | |
| 469 <action type="shell_command">R CMD INSTALL sfsmisc_1.0-28.tar.gz?raw=true</action> | |
| 470 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/polycor_0.7-8.tar.gz?raw=true</action> | |
| 471 <action type="shell_command">R CMD INSTALL polycor_0.7-8.tar.gz?raw=true</action> | |
| 472 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/polynom_1.3-8.tar.gz?raw=true</action> | |
| 473 <action type="shell_command">R CMD INSTALL polynom_1.3-8.tar.gz?raw=true</action> | |
| 474 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/prefmod_0.8-32.tar.gz?raw=true</action> | |
| 475 <action type="shell_command">R CMD INSTALL prefmod_0.8-32.tar.gz?raw=true</action> | |
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| 477 <action type="shell_command">R CMD INSTALL pscl_1.4.9.tar.gz?raw=true</action> | |
| 478 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/rbenchmark_1.0.0.tar.gz?raw=true</action> | |
| 479 <action type="shell_command">R CMD INSTALL rbenchmark_1.0.0.tar.gz?raw=true</action> | |
| 480 <!--action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/Rcompression_0.93-2.tar.gz?raw=true</action> | |
| 481 <action type="shell_command">R CMD INSTALL Rcompression_0.93-2.tar.gz?raw=true</action--> | |
| 482 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/rgenoud_5.7-12.4.tar.gz?raw=true</action> | |
| 483 <action type="shell_command">R CMD INSTALL rgenoud_5.7-12.4.tar.gz?raw=true</action> | |
| 484 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/rhdf5_2.6.0.tar.gz?raw=true</action> | |
| 485 <action type="shell_command">R CMD INSTALL rhdf5_2.6.0.tar.gz?raw=true</action> | |
| 486 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/rlecuyer_0.3-3.tar.gz?raw=true</action> | |
| 487 <action type="shell_command">R CMD INSTALL rlecuyer_0.3-3.tar.gz?raw=true</action> | |
| 488 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/rmeta_2.16.tar.gz?raw=true</action> | |
| 489 <action type="shell_command">R CMD INSTALL rmeta_2.16.tar.gz?raw=true</action> | |
| 490 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/survival_2.38-3.tar.gz?raw=true</action> | |
| 491 <action type="shell_command">R CMD INSTALL survival_2.38-3.tar.gz?raw=true</action> | |
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| 493 <action type="shell_command">R CMD INSTALL rms_4.3-1.tar.gz?raw=true</action> | |
| 494 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/RSVGTipsDevice_1.0-4.tar.gz?raw=true</action> | |
| 495 <action type="shell_command">R CMD INSTALL RSVGTipsDevice_1.0-4.tar.gz?raw=true</action> | |
| 496 <action type="download_file">https://cran.r-project.org/src/contrib/Archive/Rsymphony/Rsymphony_0.1-18.tar.gz</action> | |
| 497 <action type="shell_command">R CMD INSTALL Rsymphony_0.1-18.tar.gz</action> | |
| 498 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/RUnit_0.4.29.tar.gz?raw=true</action> | |
| 499 <action type="shell_command">R CMD INSTALL RUnit_0.4.29.tar.gz?raw=true</action> | |
| 500 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/systemfit_1.1-18.tar.gz?raw=true</action> | |
| 501 <action type="shell_command">R CMD INSTALL systemfit_1.1-18.tar.gz?raw=true</action> | |
| 502 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/sampleSelection_1.0-2.tar.gz?raw=true</action> | |
| 503 <action type="shell_command">R CMD INSTALL sampleSelection_1.0-2.tar.gz?raw=true</action> | |
| 504 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/shapefiles_0.7.tar.gz?raw=true</action> | |
| 505 <action type="shell_command">R CMD INSTALL shapefiles_0.7.tar.gz?raw=true</action> | |
| 506 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/slam_0.1-32.tar.gz?raw=true</action> | |
| 507 <action type="shell_command">R CMD INSTALL slam_0.1-32.tar.gz?raw=true</action> | |
| 508 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/Sleuth2_1.0-7.tar.gz?raw=true</action> | |
| 509 <action type="shell_command">R CMD INSTALL Sleuth2_1.0-7.tar.gz?raw=true</action> | |
| 510 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/SuppDists_1.1-9.1.tar.gz?raw=true</action> | |
| 511 <action type="shell_command">R CMD INSTALL SuppDists_1.1-9.1.tar.gz?raw=true</action> | |
| 512 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/survey_3.30-3.tar.gz?raw=true</action> | |
| 513 <action type="shell_command">R CMD INSTALL survey_3.30-3.tar.gz?raw=true</action> | |
| 514 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/tables_0.7.79.tar.gz?raw=true</action> | |
| 515 <action type="shell_command">R CMD INSTALL tables_0.7.79.tar.gz?raw=true</action> | |
| 516 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/testit_0.4.tar.gz?raw=true</action> | |
| 517 <action type="shell_command">R CMD INSTALL testit_0.4.tar.gz?raw=true</action> | |
| 518 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/timeDate_3012.100.tar.gz?raw=true</action> | |
| 519 <action type="shell_command">R CMD INSTALL timeDate_3012.100.tar.gz?raw=true</action> | |
| 520 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/tis_1.30.tar.gz?raw=true</action> | |
| 521 <action type="shell_command">R CMD INSTALL tis_1.30.tar.gz?raw=true</action> | |
| 522 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/tripack_1.3-6.tar.gz?raw=true</action> | |
| 523 <action type="shell_command">R CMD INSTALL tripack_1.3-6.tar.gz?raw=true</action> | |
| 524 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/truncreg_0.2-1.tar.gz?raw=true</action> | |
| 525 <action type="shell_command">R CMD INSTALL truncreg_0.2-1.tar.gz?raw=true</action> | |
| 526 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/tseries_0.10-34.tar.gz?raw=true</action> | |
| 527 <action type="shell_command">R CMD INSTALL tseries_0.10-34.tar.gz?raw=true</action> | |
| 528 <!--action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/TSA_1.01.tar.gz?raw=true</action> | |
| 529 <action type="shell_command">R CMD INSTALL TSA_1.01.tar.gz?raw=true</action--> | |
| 530 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/urca_1.2-8.tar.gz?raw=true</action> | |
| 531 <action type="shell_command">R CMD INSTALL urca_1.2-8.tar.gz?raw=true</action> | |
| 532 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/vcd_1.4-1.tar.gz?raw=true</action> | |
| 533 <action type="shell_command">R CMD INSTALL vcd_1.4-1.tar.gz?raw=true</action> | |
| 534 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/VGAM_0.9-8.tar.gz?raw=true</action> | |
| 535 <action type="shell_command">R CMD INSTALL VGAM_0.9-8.tar.gz?raw=true</action> | |
| 536 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/VGAMdata_0.9-7.tar.gz?raw=true</action> | |
| 537 <action type="shell_command">R CMD INSTALL VGAMdata_0.9-7.tar.gz?raw=true</action> | |
| 538 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/Zelig_4.2-1.tar.gz?raw=true</action> | |
| 539 <action type="shell_command">R CMD INSTALL Zelig_4.2-1.tar.gz?raw=true</action> | |
| 540 <!--action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/UPLOAD2/Rmpi_0.6-5.tar.gz?raw=true</action> | |
| 541 <action type="shell_command">R CMD INSTALL Rmpi_0.6-5.tar.gz?raw=true</action--> | |
| 542 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/uplod/caTools_1.17.1.tar.gz?raw=true</action> | |
| 543 <action type="shell_command">R CMD INSTALL caTools_1.17.1.tar.gz?raw=true</action> | |
| 544 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/uplod/pbapply_1.1-1.tar.gz?raw=true</action> | |
| 545 <action type="shell_command">R CMD INSTALL pbapply_1.1-1.tar.gz?raw=true</action> | |
| 546 <action type="download_file">https://github.com/Deep2106/R-3.1.3caret/blob/CARET/DataMiningWORK/GIT_GCAC_CODES/GIT/uplod/caretEnsemble_1.0.0.tar.gz?raw=true</action> | |
| 547 <action type="shell_command">R CMD INSTALL caretEnsemble_1.0.0.tar.gz?raw=true</action> | |
| 548 | |
| 549 | |
| 550 | |
| 551 | |
| 552 </actions> | |
| 553 | |
| 554 | |
| 555 | |
| 556 | |
| 557 </install> | |
| 558 <readme> | |
| 559 caret tools installed successfully. | |
| 560 </readme> | |
| 561 </package> | |
| 562 | |
| 563 </tool_dependency> |