Mercurial > repos > dereeper > pangenome_explorer
annotate panexplorer_sbatch.sh @ 10:d103c41b6931 draft
Uploaded
author | dereeper |
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date | Thu, 30 May 2024 16:35:22 +0000 |
parents | e42d30da7a74 |
children |
rev | line source |
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3 | 1 #!/bin/bash |
2 | |
3 #SBATCH --job-name=panexplorer | |
4 #SBATCH --cpus-per-task=18 | |
5 #SBATCH --mem-per-cpu=20G | |
6 #SBATCH --partition=supermem | |
7 | |
8 module load singularity/4.0.1 | |
9 export PANEX_PATH=$PWD | |
10 | |
11 singularity exec $PANEX_PATH/singularity/panexplorer.sif snakemake --cores 1 -s Snakemake_files/Snakefile_pggb_heatmap_upset |