Mercurial > repos > dereeper > pangenome_explorer

annotate panexplorer_sbatch.sh @ 3:e42d30da7a74 draft

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author dereeper
date Thu, 30 May 2024 11:52:25 +0000
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1 #!/bin/bash
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2
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3 #SBATCH --job-name=panexplorer
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4 #SBATCH --cpus-per-task=18
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5 #SBATCH --mem-per-cpu=20G
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6 #SBATCH --partition=supermem
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7
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8 module load singularity/4.0.1
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9 export PANEX_PATH=$PWD
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10
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11 singularity exec $PANEX_PATH/singularity/panexplorer.sif snakemake --cores 1 -s Snakemake_files/Snakefile_pggb_heatmap_upset