Mercurial > repos > dereeper > pangenome_explorer
diff PanExplorer_workflow/COG/fun.txt @ 1:032f6b3806a3 draft
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author | dereeper |
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date | Thu, 30 May 2024 11:16:08 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/PanExplorer_workflow/COG/fun.txt Thu May 30 11:16:08 2024 +0000 @@ -0,0 +1,32 @@ +INFORMATION STORAGE AND PROCESSING + [J] Translation, ribosomal structure and biogenesis + [A] RNA processing and modification + [K] Transcription + [L] Replication, recombination and repair + [B] Chromatin structure and dynamics + +CELLULAR PROCESSES AND SIGNALING + [D] Cell cycle control, cell division, chromosome partitioning + [Y] Nuclear structure + [V] Defense mechanisms + [T] Signal transduction mechanisms + [M] Cell wall/membrane/envelope biogenesis + [N] Cell motility + [Z] Cytoskeleton + [W] Extracellular structures + [U] Intracellular trafficking, secretion, and vesicular transport + [O] Posttranslational modification, protein turnover, chaperones + +METABOLISM + [C] Energy production and conversion + [G] Carbohydrate transport and metabolism + [E] Amino acid transport and metabolism + [F] Nucleotide transport and metabolism + [H] Coenzyme transport and metabolism + [I] Lipid transport and metabolism + [P] Inorganic ion transport and metabolism + [Q] Secondary metabolites biosynthesis, transport and catabolism + +POORLY CHARACTERIZED + [R] General function prediction only + [S] Function unknown