Mercurial > repos > dereeper > pangenome_explorer
diff panexplorer_sbatch.sh @ 3:e42d30da7a74 draft
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author | dereeper |
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date | Thu, 30 May 2024 11:52:25 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/panexplorer_sbatch.sh Thu May 30 11:52:25 2024 +0000 @@ -0,0 +1,11 @@ +#!/bin/bash + +#SBATCH --job-name=panexplorer +#SBATCH --cpus-per-task=18 +#SBATCH --mem-per-cpu=20G +#SBATCH --partition=supermem + +module load singularity/4.0.1 +export PANEX_PATH=$PWD + +singularity exec $PANEX_PATH/singularity/panexplorer.sif snakemake --cores 1 -s Snakemake_files/Snakefile_pggb_heatmap_upset