# HG changeset patch
# User dereeper
# Date 1627322434 0
# Node ID 35f0fcf77bdf0439d03cd979904fe0b1a53678fe
# Parent  f98ddf3006f02017cd0d63a740131e1c9a16c59d
Deleted selected files

diff -r f98ddf3006f0 -r 35f0fcf77bdf ragoo.xml
--- a/ragoo.xml	Mon Jul 26 17:52:22 2021 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,32 +0,0 @@
-<tool id="ragoo" name="RaGOO" version="1.0">
-  <description>Order and assign scaffolds</description>
- <requirements>
-  <requirement type="package" version="3.0.2">intervaltree</requirement>
-  <requirement type="package" version="1.21.1">numpy</requirement>
- </requirements>
-
-  <command>perl ${__tool_directory__}/ragoo.pl $input $reference $output $output2
-</command>
-
- 
-  <inputs>
-  <param format="fasta" name="input" type="data" label="Fasta file with contigs to be ordered and oriented: "/>
-  <param format="fasta" name="reference" type="data" label="Reference fasta file"/>
-   
- </inputs>
-
- <outputs>
-	 <data format="fasta" name="output" label="Fasta output of assigned scaffolds"/>
-	 <data format="fasta" name="output2" label="Fasta output of assigned scaffolds (without Chr0)"/>
-</outputs>
-
-  <help>
- For full documentation, please go to the RaGOO website : https://github.com/malonge/RaGOO 
-	  
-</help>
-
-  <citations>
-	  <citation type="doi"> 10.1186/s13059-019-1829-6 </citation>
-
-  </citations>
-</tool>
diff -r f98ddf3006f0 -r 35f0fcf77bdf ragoo.zip
Binary file ragoo.zip has changed