annotate Roary/t/data/expected_combined_proteome.fa @ 0:c47a5f61bc9f draft

Uploaded
author dereeper
date Fri, 14 May 2021 20:27:06 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
1 >1234#10_00001 nudix hydrolase
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
2 MSKHGFFQITQKLFLRKGDELLILRDRKSGLGDLPGGRMNENEFFEDWSLSMQREIEEEL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
3 GSQVQIRVSTKPLFIHKHKVNEGNFPCIIIAYHADYLGGDIILSDEHDYISWEKVQTYEP
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
4 SPLFTEYMLDAVNLYLKEYAPLVH*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
5 >1234#10_00002 intramembrane serine protease
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
6 MIIKLKIILNSYLIYYFLRGQNTLIRTLLFEFPLTTFFVFLMVATFFIVNVFLPEHLIRQ
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
7 YFLNHPGQIQPLSWIGAVFYHGNLIHLFGNMFYLFFLGRAVEYKAGKGRWLLFFFMAALI
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
8 SSLLDSFIRGVILHDPTPVVGASGAISGIAAVAALLSPFSLRFNQRNIPFPVFLVAWIMV
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
9 YSDITNVFTEDGVARWAHLGGFISVIFAAYFLKPTERKQLHSGFILNLIFIILTLILAFF
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
10 YSNRS*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
11 >1234#10_00003 hypothetical protein
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
12 VKTTLSGEIEKLRYEVAVKIVNLQGEVLDLRAEMKINFSEVNSKILKLQFEFEMAKIRKE
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
13 LKTEIADLRAETKTDFLELQKSIVDIYKTISTQTRWILGVATLFAAIGKVIN*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
14 >1234#10_00005 imidazoleglycerol-phosphate dehydratase or histidinol-phosphatase
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
15 LTDKLIGFYDPVRMKAERKTSETEIKLEMNLRGTGQYQFDTEIPFFEHMLSHISKHGLID
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
16 LNLWLRGDIEIDCHHSVEDTAILMGATIHKQLGDKAGIFRYGHFTLTMDEVLTTVAVDLG
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
17 GRYFFKYTGPELTGKFGIYDAELSLEFLQKLALNAKMNLHVVVHYGDNKHHVHESIFKAL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
18 GKALRMAIAQDSAAAGAIPSTKGVLE*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
19 >1234#10_00006 imidazole glycerol phosphate synthase subunit HisH
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
20 MIAILDYGMGNIHSCLKAVSLYTKDFVFTKDHSTIENSKALILPGDGHFDKAMENLNSTG
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
21 LRKTIDKHVTSGKPLFGICIGFQILFESSEEIAQGSKKEQIEGLGYIKGKIKKFHGKDFK
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
22 VPHIGWNRLQIRRKDKSVLLKGIGDQSFFYFIHSYRPTDAEGNAITGLCDYYQEKFPAVV
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
23 EKNNIFGTQFHPEKSHTHGLKLLENFIRFI*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
24 >1234#10_00007 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
25 MIVIPAIDLFDNCAVRLFKGNYEEKKIYSSEPWKLAESFAKNGATLLHLVDLNGARNQLG
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
26 VNEDSILKIRETTSLKVQLGGGIRDKEKLAYYDKIGINRFILGTAAVTNPDLLKYALDNY
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
27 GKERVVVAVDARDGIVKIAGWEKDSGIHYRDLLERLVKAGIEHIVFTDIAQDGTLAGPNL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
28 EAYREILNSYPFQVIASGGIASLKDLMDLSSLKTKISLYGVITGKALYEGKLDLAKAISS
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
29 I*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
30 >1234#10_00016 hypothetical protein
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
31 MKVTHSCLEFDSIEGLIDFAREFETGSMIRFLSPIEDNSGNVLVKEEVQVKESTLARLKD
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
32 IKGQYTPKFEVKLNKELLEQIQNILAIKIVNQLKVTDMKFLKFMYENTNYNFKGIIRNSL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
33 LSKKTTLTLLKVYNQNLNFFKYISELGLLSLGIVMIPDTMRFRLLRRYAFTAGILMDVPR
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
34 IGVDKFTKLPSDDNEKVRVAHKCSDILQKLDLIEFTYGSISNHMPLGMIEDSTSSDKAAP
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
35 GENIDETFLDDIISNDGESDSKVDGSREDAIPEKSYDIFQALLTDALKLARYIANVSHNA
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
36 VDKDYVMEELVYYIAYNTSKKYFDELLANPLVATFKEFEVNVKRLRKIAEVEMKCVYPPS
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
37 AWAYPKPKSSQVLCKNKVWDCPNIVMGWDIHVITAQEAFGWVGTSLPVDNYPKCRLEEEL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
38 DEIMVEPEKPKKK*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
39 >1234#10_00017 LipL45-like lipoprotein
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
40 MKRYLSIVILCTFAMLLLVCSTNKSSGSDQVKTESNATSARIVWLLGDVKILSDSGEKKA
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
41 ELGASLSSTDRVVTGPNGGAEIMVADSGIIKMSKNSDIEISSLMNPNGSDTNVQVNYGKI
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
42 VTMVKKGQKTTEFTVSTPTALAGVRGTSFLTSVESPEGSKINCAKANCTVRFAVIEGTIA
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
43 VSKKGESSEVILSKNRELRIEKNQKLTDKLIRSLQNDSLSEMKELIVLHKNETFEYGKLV
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
44 EELKSSSEELKILSQSGSVEEVKAAFQKREADRNNADEITKTAKAVNETKYVQQDVQKEK
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
45 LKLNPKETF*
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
46 >1234#10_00018 putative lipoprotein
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
47 MDFSFNLVDNNGTVMRSTFSPIRFFTFSFLWILIDCSSVQKIENFNSVLQEPTFKSLKEE
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
48 EAILGGSSDSDYKIRKTGNTIPVFVLSPIQTPEGMDSKLAAFLSDEVRLIWAKVKGKQVR
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
49 IQEMSWKNPSQLSQELKRLNVDAVIKTDIREVSGKWVVNQKITDPVKEIVYGSVDGSFQS
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
50 PKIEDELQANQAYYLKHGSGVLALDAKSSLVPIWEKSLSSGEIDSILKKSIQGYLSFSAS
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
51 SADTEVLFQGEKIGIASFRNYPLPEGLQQIQITRPGQKDISKSLQIRSGQTISIYQEWKE
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
52 DRTLGGVRILSFPEALQVALDGLKMGETPFYRSNLTPGAMQLELVRETENGPLVYYEGQL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
53 IVDADKITEIALPYKTDNLISEPEFWKLSGEKGFQAFSGKTLDFQNVSSLPPGWYGVFSA
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
54 PFVPENMELEGIIPITAESDSGIVAISFHTSKKTISLEYEKERLSVYSFPSNGNNVGTYK
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
55 FKKEDKEDGRPFRIITDVKEGTIRLYLGYSKVLEDRLDVSGVWRISILTRGENFSKRSPL
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
56 RNLKIEYKGYK*