Mercurial > repos > dereeper > roary_plots
diff Roary/t/data/kraken_test/taxonomy/names.dmp @ 0:c47a5f61bc9f draft
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author | dereeper |
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date | Fri, 14 May 2021 20:27:06 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Roary/t/data/kraken_test/taxonomy/names.dmp Fri May 14 20:27:06 2021 +0000 @@ -0,0 +1,77 @@ +1 | all | | synonym | +1 | root | | scientific name | +2 | Bacteria | Bacteria <prokaryote> | scientific name | +2 | Monera | Monera <Bacteria> | in-part | +2 | Procaryotae | Procaryotae <Bacteria> | in-part | +2 | Prokaryota | Prokaryota <Bacteria> | in-part | +2 | Prokaryotae | Prokaryotae <Bacteria> | in-part | +2 | bacteria | bacteria <blast2> | blast name | +2 | eubacteria | | genbank common name | +2 | not Bacteria Haeckel 1894 | | synonym | +2 | prokaryote | prokaryote <Bacteria> | in-part | +2 | prokaryotes | prokaryotes <Bacteria> | in-part | +1239 | Bacillus/Clostridium group | | synonym | +1239 | Clostridium group firmicutes | | synonym | +1239 | Firmacutes | | synonym | +1239 | Firmicutes | | scientific name | +1239 | Firmicutes corrig. Gibbons and Murray 1978 | | authority | +1239 | Gram positive bacteria | | misspelling | +1239 | Gram-positive bacteria | | genbank common name | +1239 | Low G+C firmicutes | | synonym | +1239 | clostridial firmicutes | | synonym | +1239 | firmicutes | firmicutes <blast1239> | blast name | +1239 | low G+C Gram-positive bacteria | | common name | +1239 | low GC Gram+ | low GC gram-positives<blast31968> | common name | +1279 | "Aurococcus" Winslow and Rogers 1906 | | authority | +1279 | Aurococcus | | synonym | +1279 | Staphylococcus | | scientific name | +1279 | Staphylococcus Rosenbach 1884 | | authority | +1280 | "Micrococcus aureus" (Rosenbach 1884) Zopf 1885 | | authority | +1280 | "Micrococcus pyogenes" Lehmann and Neumann 1896 | | authority | +1280 | "Staphlococcus pyogenes citreus" Passet 1885 | | authority | +1280 | "Staphylococcus pyogenes aureus" Rosenbach 1884 | | authority | +1280 | ATCC 12600 | | type material | +1280 | ATCC 12600-U | | type material | +1280 | CCM 885 | | type material | +1280 | CCUG 1800 | | type material | +1280 | CIP 65.8 | | type material | +1280 | DSM 20231 | | type material | +1280 | HAMBI 66 | | type material | +1280 | JCM 20624 | | type material | +1280 | Micrococcus aureus | | synonym | +1280 | Micrococcus pyogenes | | synonym | +1280 | NBRC 100910 | | type material | +1280 | NCAIM B.01065 | | type material | +1280 | NCCB 72047 | | type material | +1280 | NCTC 8532 | | type material | +1280 | Staphilococcus aureus | | misspelling | +1280 | Staphlococcus pyogenes citreus | | synonym | +1280 | Staphylococcus aureus | | scientific name | +1280 | Staphylococcus aureus Rosenbach 1884 | | authority | +1280 | Staphylococcus pyogenes aureus | | synonym | +1280 | Staphylococus aureus | | misspelling | +1280 | Streptococcus aureus | | misnomer | +1385 | Bacillales | | scientific name | +1385 | Bacillales Prevot 1953 | | authority | +1385 | Bacillus/Staphylococcus group | | synonym | +46170 | Staphylococcus aureus aureus | | equivalent name | +46170 | Staphylococcus aureus subsp. aureus | | scientific name | +46170 | Staphylococcus aureus subsp. aureus Rosenbach 1884 | | authority | +90964 | Staphylococcaceae | | scientific name | +90964 | Staphylococcaceae Schleifer and Bell 2010 | | authority | +90964 | Staphylococceae | | includes | +90964 | Staphylococceae Prevot 1940 | | includes | +90964 | Staphylococcus group | | synonym | +91061 | Bacilli | | scientific name | +91061 | Bacilli Ludwig et al. 2010 | | authority | +91061 | Bacillus/Lactobacillus/Streptococcus group | | synonym | +91061 | Firmibacteria | | synonym | +91061 | Firmibacteria Murray 1988 | | authority | +131567 | biota | | synonym | +131567 | cellular organisms | | scientific name | +663951 | Staphylococcus aureus subsp. aureus 0528 | | misspelling | +663951 | Staphylococcus aureus subsp. aureus 0582 | | synonym | +663951 | Staphylococcus aureus subsp. aureus TW20 | | scientific name | +663951 | Staphylococcus aureus subsp. aureus str. TW20 | | equivalent name | +663951 | Staphylococcus aureus subsp. aureus strain TW20 | | equivalent name | +2000000000 | Staphylococcus aureus | | scientific name |