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comparison SNP_density/calculateSlidingWindowsSNPdensitiesFromHapmap.sh @ 1:420b57c3c185 draft

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author dereeper
date Fri, 10 Jul 2015 04:39:30 -0400
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0:3e19d0dfcf3e 1:420b57c3c185
1 #!/bin/bash
2
3 tool_path=$(dirname $0)
4 hapmap=$1
5 fileout=$2
6 fileout_bysample=$3
7 step=$4
8
9 perl $tool_path/CalculateSlidingWindowsSNPdensitiesFromHapmap.pl -i $hapmap -o $fileout -s $step
10
11 cp $fileout.by_sample $fileout_bysample
12 rm $fileout.by_sample
13