# HG changeset patch
# User dereeper
# Date 1524229465 14400
# Node ID 15b23cdde68581c93aa27264a207425a3e09ad6b
# Parent  c6640c49fd01f79e9320326f2b22820e47b25900
planemo upload commit 305985afd3b7c3d47f531149c2f1a279af2d12aa-dirty

diff -r c6640c49fd01 -r 15b23cdde685 MDSplot/mdsplot.xml
--- a/MDSplot/mdsplot.xml	Mon Apr 16 09:00:24 2018 -0400
+++ b/MDSplot/mdsplot.xml	Fri Apr 20 09:04:25 2018 -0400
@@ -6,6 +6,7 @@
     <!-- [OPTIONAL] 3rd party tools, binaries, modules... required for the tool to work -->
     <requirements>
         <requirement type="binary">perl</requirement>
+        <requirement type="package">rsync</requirement>
         <requirement type="package" version="1.6.924">perl-bioperl</requirement>
         <requirement type="package" version="1.90b4">plink</requirement>
     </requirements>
@@ -102,9 +103,13 @@
         plink_ 1.90b4, Conda version
 Bioperl
         perl-bioperl_ 1.6.924, Conda version
+Rsync
+        rsync_, Conda version
+
 
 .. _plink: https://anaconda.org/bioconda/plink
 .. _perl-bioperl: https://anaconda.org/bioconda/perl-bioperl
+.. _rsync: https://anaconda.org/conda-forge/rsync
 
 -----------
 Input files
diff -r c6640c49fd01 -r 15b23cdde685 Rooting/rooting.xml
--- a/Rooting/rooting.xml	Mon Apr 16 09:00:24 2018 -0400
+++ b/Rooting/rooting.xml	Fri Apr 20 09:04:25 2018 -0400
@@ -30,14 +30,14 @@
    
     <!-- [REQUIRED] Input files and tool parameters -->
     <inputs>
-	<param name="filein" type="data" format="nwk,nhx" optional="false" label="Newick tree input" />
+	<param name="filein" type="data" format="nhx" optional="false" label="Newick tree input" />
 	<param name="fileout_label" type="text" value="out tree" label="Output name" help="Output name for files" />
     </inputs> 
     
     <!-- [REQUIRED] Output files -->
     <outputs>
 	<data name="fileout_log" format="txt" label="${fileout_label}.log" />
-	<data name="fileout" format="nwk,nhx" label="${fileout_label}" />
+	<data name="fileout" format="nhx" label="${fileout_label}" />
     </outputs>
     
     <!-- [OPTIONAL] Tests to be run manually by the Galaxy admin -->