annotate fixedValueColumn.xml @ 4:023f0a3760b3 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/add_value commit 4066016ffafd7918ba9826db4f3c6fb41315e942

<tool id="addValue" name="Add column" version="1.0.1" profile="16.04">
    <description>to an existing dataset</description>
    <requirements>
        <requirement type="package" version="5.26">perl</requirement>
    </requirements>
    <command>
        perl $__tool_directory__/fixedValueColumn.pl
            "${input}"
            "${out_file1}"
            "${exp}"
            "${iterate}"
    </command>
    <inputs>
        <param name="exp" type="text" value="1" label="Add this value"/>
        <param format="tabular" name="input" type="data" label="to Dataset" help="Dataset missing? See TIP below" />
        <param name="iterate" type="select" label="Iterate?">
            <option value="no">NO</option>
            <option value="yes">YES</option>
        </param>
    </inputs>
    <outputs>
        <data name="out_file1" format_source="input"/>
    </outputs>
    <tests>
        <test>
            <param name="exp" value="1"/>
            <param name="input" value="1.bed"/>
            <param name="iterate" value="no"/>
            <output name="out_file1" file="eq-addvalue.dat"/>
        </test>
    </tests>
    <help>

.. class:: infomark

**TIP:** If your data is not TAB delimited, use *Text Manipulation-&gt;Convert*

-----

**What it does**

You can enter any value and it will be added as a new column to your dataset

-----

**Example**

If you original data looks like this::

    chr1 10  100 geneA
    chr2 200 300 geneB
    chr2 400 500 geneC

Typing **+** in the text box will generate::

    chr1 10  100 geneA +
    chr2 200 300 geneB +
    chr2 400 500 geneC +
     

You can also add line numbers by selecting **Iterate: YES**. In this case if you enter **1** in the text box you will get::

    chr1 10  100 geneA 1
    chr2 200 300 geneB 2
    chr2 400 500 geneC 3

    </help>
</tool>