Mercurial > repos > devteam > add_value
changeset 4:023f0a3760b3 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/add_value commit 4066016ffafd7918ba9826db4f3c6fb41315e942
| author | devteam |
|---|---|
| date | Fri, 29 Sep 2023 15:06:32 +0000 |
| parents | 745871c0b055 |
| children | |
| files | fixedValueColumn.xml |
| diffstat | 1 files changed, 34 insertions(+), 26 deletions(-) [+] |
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--- a/fixedValueColumn.xml Wed Nov 11 12:03:16 2015 -0500 +++ b/fixedValueColumn.xml Fri Sep 29 15:06:32 2023 +0000 @@ -1,26 +1,35 @@ -<tool id="addValue" name="Add column" version="1.0.0"> - <description>to an existing dataset</description> - <command interpreter="perl">fixedValueColumn.pl "${input}" "${out_file1}" "${exp}" "${iterate}"</command> - <inputs> - <param name="exp" type="text" value="1" label="Add this value"/> - <param format="tabular" name="input" type="data" label="to Dataset" help="Dataset missing? See TIP below" /> - <param name="iterate" type="select" label="Iterate?"> - <option value="no">NO</option> - <option value="yes">YES</option> - </param> - </inputs> - <outputs> - <data format="input" name="out_file1" metadata_source="input"/> - </outputs> - <tests> - <test> - <param name="exp" value="1"/> - <param name="input" value="1.bed"/> - <param name="iterate" value="no"/> - <output name="out_file1" file="eq-addvalue.dat"/> - </test> - </tests> - <help> +<tool id="addValue" name="Add column" version="1.0.1" profile="16.04"> + <description>to an existing dataset</description> + <requirements> + <requirement type="package" version="5.26">perl</requirement> + </requirements> + <command> + perl $__tool_directory__/fixedValueColumn.pl + "${input}" + "${out_file1}" + "${exp}" + "${iterate}" + </command> + <inputs> + <param name="exp" type="text" value="1" label="Add this value"/> + <param format="tabular" name="input" type="data" label="to Dataset" help="Dataset missing? See TIP below" /> + <param name="iterate" type="select" label="Iterate?"> + <option value="no">NO</option> + <option value="yes">YES</option> + </param> + </inputs> + <outputs> + <data name="out_file1" format_source="input"/> + </outputs> + <tests> + <test> + <param name="exp" value="1"/> + <param name="input" value="1.bed"/> + <param name="iterate" value="no"/> + <output name="out_file1" file="eq-addvalue.dat"/> + </test> + </tests> + <help> .. class:: infomark @@ -55,7 +64,6 @@ chr2 200 300 geneB 2 chr2 400 500 geneC 3 - + </help> +</tool> -</help> -</tool>