# HG changeset patch
# User devteam
# Date 1396466466 14400
# Node ID 1d427770e7ec6bd01b21cc70f5daa5567fd70fa3
# Parent  be6bede2245962768b98b2a169fa60f7d038ba3b
Uploaded tool wrapper XML with correct specification of java .jar path.

diff -r be6bede22459 -r 1d427770e7ec analyze_covariates.xml
--- a/analyze_covariates.xml	Tue Apr 01 10:48:14 2014 -0400
+++ b/analyze_covariates.xml	Wed Apr 02 15:21:06 2014 -0400
@@ -11,7 +11,7 @@
    --stdout "${output_log}"
    --html_report_from_directory "${output_html}" "${output_html.files_path}"
    -p 'java 
-    -jar "${JAVA_JAR_PATH}/AnalyzeCovariates.jar"
+    -jar "\$JAVA_JAR_PATH/AnalyzeCovariates.jar"
     -recalFile "${input_recal}"
     -outputDir "${output_html.files_path}"
     ##--num_threads 4 ##hard coded, for now