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changeset 9:7bee165c3a44 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/bwa commit b3b7a9898eb2b5d12745ef96250b04955bd1e209
author devteam
date Thu, 03 Dec 2015 17:38:14 -0500
parents ca29c55c78e7
children 6069ffa8b240
files bwa-mem.xml bwa.xml bwa_macros.xml tool_dependencies.xml
diffstat 4 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/bwa-mem.xml	Wed Nov 11 12:05:29 2015 -0500
+++ b/bwa-mem.xml	Thu Dec 03 17:38:14 2015 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="bwa_mem" name="Map with BWA-MEM" version="0.4.1">
+<tool id="bwa_mem" name="Map with BWA-MEM" version="0.4.2">
   <description>- map medium and long reads (&gt; 100 bp) against reference genome</description>
   <macros>
     <import>read_group_macros.xml</import>
--- a/bwa.xml	Wed Nov 11 12:05:29 2015 -0500
+++ b/bwa.xml	Thu Dec 03 17:38:14 2015 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="bwa" name="Map with BWA" version="0.4.1">
+<tool id="bwa" name="Map with BWA" version="0.4.2">
   <description>- map short reads (&lt; 100 bp) against reference genome</description>
   <macros>
     <import>read_group_macros.xml</import>
--- a/bwa_macros.xml	Wed Nov 11 12:05:29 2015 -0500
+++ b/bwa_macros.xml	Thu Dec 03 17:38:14 2015 -0500
@@ -17,7 +17,7 @@
 
   <xml name="requirements">
     <requirements>
-      <requirement type="package" version="0.7.10.039ea20639">bwa</requirement>
+      <requirement type="package" version="0.7.12">bwa</requirement>
       <requirement type="package" version="1.2">samtools</requirement>
     </requirements>
   </xml>
--- a/tool_dependencies.xml	Wed Nov 11 12:05:29 2015 -0500
+++ b/tool_dependencies.xml	Thu Dec 03 17:38:14 2015 -0500
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="bwa" version="0.7.10.039ea20639">
-        <repository changeset_revision="5b9aca1e1c07" name="package_bwa_0_7_10_039ea20639" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <package name="bwa" version="0.7.12">
+        <repository changeset_revision="6af9b24ddeee" name="package_bwa_0_7_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="samtools" version="1.2">
         <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />