Mercurial > repos > devteam > ccat
comparison test-data/peakcalling_ccat/3.0/ccat_test_log_out_2.txt @ 0:a0c8dc671a23 draft
Imported from capsule None
author | devteam |
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date | Mon, 27 Jan 2014 09:27:03 -0500 |
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-1:000000000000 | 0:a0c8dc671a23 |
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1 chromosome length information read. chromNum = 49! | |
2 config file read. | |
3 fragmentSize = 200 | |
4 isStrandSensitiveMode = 0 | |
5 slidingWinSize = 1000 | |
6 movingStep = 50 | |
7 outputNum = 100000 | |
8 minCount = 4 | |
9 minScore = 5.000000 | |
10 bootstrapPass = 50 | |
11 randSeed = 123456 | |
12 reading tag files...... | |
13 10000 tags in L1, 10000 tags in L2. | |
14 tag file read. | |
15 pre-processing...... | |
16 pre-processing finished. | |
17 estimating noise rate...... | |
18 not enough reads for noise rate estimation. | |
19 noise rate estimation failed. noise rate set to be 1.0 | |
20 noise rate = 1.000000 | |
21 peak-finding...... | |
22 chr1......673 candidate peaks. | |
23 chr1_random......0 candidate peaks. | |
24 chr10......0 candidate peaks. | |
25 chr10_random......0 candidate peaks. | |
26 chr11......0 candidate peaks. | |
27 chr11_random......0 candidate peaks. | |
28 chr12......0 candidate peaks. | |
29 chr13......0 candidate peaks. | |
30 chr13_random......0 candidate peaks. | |
31 chr14......0 candidate peaks. | |
32 chr15......0 candidate peaks. | |
33 chr15_random......0 candidate peaks. | |
34 chr16......0 candidate peaks. | |
35 chr16_random......0 candidate peaks. | |
36 chr17......0 candidate peaks. | |
37 chr17_random......0 candidate peaks. | |
38 chr18......0 candidate peaks. | |
39 chr18_random......0 candidate peaks. | |
40 chr19......0 candidate peaks. | |
41 chr19_random......0 candidate peaks. | |
42 chr2......0 candidate peaks. | |
43 chr2_random......0 candidate peaks. | |
44 chr20......0 candidate peaks. | |
45 chr21......0 candidate peaks. | |
46 chr21_random......0 candidate peaks. | |
47 chr22......0 candidate peaks. | |
48 chr22_random......0 candidate peaks. | |
49 chr22_h2_hap1......0 candidate peaks. | |
50 chr3......0 candidate peaks. | |
51 chr3_random......0 candidate peaks. | |
52 chr4......0 candidate peaks. | |
53 chr4_random......0 candidate peaks. | |
54 chr5......0 candidate peaks. | |
55 chr5_random......0 candidate peaks. | |
56 chr5_h2_hap1......0 candidate peaks. | |
57 chr6......0 candidate peaks. | |
58 chr6_random......0 candidate peaks. | |
59 chr6_cox_hap1......0 candidate peaks. | |
60 chr6_qbl_hap2......0 candidate peaks. | |
61 chr7......0 candidate peaks. | |
62 chr7_random......0 candidate peaks. | |
63 chr8......0 candidate peaks. | |
64 chr8_random......0 candidate peaks. | |
65 chr9......0 candidate peaks. | |
66 chr9_random......0 candidate peaks. | |
67 chrM......0 candidate peaks. | |
68 chrX......0 candidate peaks. | |
69 chrX_random......0 candidate peaks. | |
70 chrY......0 candidate peaks. | |
71 peak-finding finished. | |
72 Significance Analysis...... | |
73 estimating paramters...... | |
74 smoothing factor = 0.287387 | |
75 estimating local FDR..... | |
76 FDR at the threshold 5.000000 is 0.999000. You may want to adjust the threshold by inspecting the output files. | |
77 post-processing...... | |
78 chr1......finished. | |
79 chr1_random......finished. | |
80 chr10......finished. | |
81 chr10_random......finished. | |
82 chr11......finished. | |
83 chr11_random......finished. | |
84 chr12......finished. | |
85 chr13......finished. | |
86 chr13_random......finished. | |
87 chr14......finished. | |
88 chr15......finished. | |
89 chr15_random......finished. | |
90 chr16......finished. | |
91 chr16_random......finished. | |
92 chr17......finished. | |
93 chr17_random......finished. | |
94 chr18......finished. | |
95 chr18_random......finished. | |
96 chr19......finished. | |
97 chr19_random......finished. | |
98 chr2......finished. | |
99 chr2_random......finished. | |
100 chr20......finished. | |
101 chr21......finished. | |
102 chr21_random......finished. | |
103 chr22......finished. | |
104 chr22_random......finished. | |
105 chr22_h2_hap1......finished. | |
106 chr3......finished. | |
107 chr3_random......finished. | |
108 chr4......finished. | |
109 chr4_random......finished. | |
110 chr5......finished. | |
111 chr5_random......finished. | |
112 chr5_h2_hap1......finished. | |
113 chr6......finished. | |
114 chr6_random......finished. | |
115 chr6_cox_hap1......finished. | |
116 chr6_qbl_hap2......finished. | |
117 chr7......finished. | |
118 chr7_random......finished. | |
119 chr8......finished. | |
120 chr8_random......finished. | |
121 chr9......finished. | |
122 chr9_random......finished. | |
123 chrM......finished. | |
124 chrX......finished. | |
125 chrX_random......finished. | |
126 chrY......finished. | |
127 post-processing finished. | |
128 Significance analysis finished. | |
129 saving results....... | |
130 results saved. | |
131 CCAT process completed! |