Mercurial > repos > devteam > ccat
diff test-data/ES_CTCF_chr19.log @ 2:1a6979fbd544 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/ccat commit 1370bb21ee5712a13a26d289065406c5d489b8cc"
author | devteam |
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date | Fri, 03 Dec 2021 16:27:57 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ES_CTCF_chr19.log Fri Dec 03 16:27:57 2021 +0000 @@ -0,0 +1,53 @@ +chromosome length information read. chromNum = 1! +config file read. +fragmentSize = 200 +isStrandSensitiveMode = 1 +slidingWinSize = 300 +movingStep = 10 +outputNum = 100000 +minCount = 3 +minScore = 5.000000 +bootstrapPass = 50 +randSeed = 123456 +reading tag files...... +103146 tags in L1, 97149 tags in L2. +tag file read. +pre-processing...... +pre-processing finished. +estimating noise rate...... +iteration 0: nr=0.669578 +iteration 1: nr=0.613605 +iteration 2: nr=0.593059 +iteration 3: nr=0.586303 +iteration 4: nr=0.583061 +iteration 5: nr=0.583061 +iteration 6: nr=0.582451 +iteration 7: nr=0.586573 +iteration 8: nr=0.583271 +iteration 9: nr=0.581424 +iteration 10: nr=0.585253 +iteration 11: nr=0.583917 +iteration 12: nr=0.583446 +iteration 13: nr=0.581896 +iteration 14: nr=0.583084 +iteration 15: nr=0.581582 +iteration 16: nr=0.582966 +iteration 17: nr=0.583596 +iteration 18: nr=0.586691 +iteration 19: nr=0.584954 +noise rate = 0.583743 +peak-finding...... +chr19......2946 candidate peaks. +peak-finding finished. +Significance Analysis...... +estimating paramters...... +smoothing factor = 20.048787 +estimating local FDR..... +FDR at the threshold 5.000000 is 0.999000. You may want to adjust the threshold by inspecting the output files. +post-processing...... +chr19......finished. +post-processing finished. +Significance analysis finished. +saving results....... +results saved. +CCAT process completed!