Mercurial > repos > devteam > clustalw
comparison rgClustalw.xml @ 6:83e828f8ba26 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/clustalw commit 316bb2e04638dc36346452fbb62aa29cce3cef67
| author | iuc |
|---|---|
| date | Wed, 01 Nov 2023 09:00:11 +0000 |
| parents | d9c2b2fde6a3 |
| children |
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| 5:4daabc25df00 | 6:83e828f8ba26 |
|---|---|
| 1 <tool id="clustalw" name="ClustalW" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> | 1 <tool id="clustalw" name="ClustalW" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> |
| 2 <description>multiple sequence alignment program for DNA or proteins</description> | 2 <description>multiple sequence alignment program for DNA or proteins</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="biotools" /> | |
| 6 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 7 <command detect_errors="exit_code"><![CDATA[ | 8 <command detect_errors="exit_code"><![CDATA[ |
| 8 ln -s '$input' input.fasta && | 9 ln -s '$input' input.fasta && |
| 9 clustalw2 -INFILE=input.fasta -OUTFILE='$output' -OUTORDER=$out_order -TYPE=$type_conditional.dnarna | 10 clustalw2 -INFILE=input.fasta -OUTFILE='$output' -OUTORDER=$out_order -TYPE=$type_conditional.dnarna |
| 10 #if $outcontrol.outform == "clustal" | 11 #if $outcontrol.outform == "clustal" |