Mercurial > repos > devteam > clustalw
view test-data/rgClustal_testout03.fasta @ 5:4daabc25df00 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/clustalw commit f7923954e747d05d1e70d653ef1b544c3e14622f
| author | iuc |
|---|---|
| date | Sun, 02 Oct 2022 15:32:37 +0000 |
| parents | |
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CLUSTAL 2.1 multiple sequence alignment 14== ------------------------------------MESGNV-SSSLFGNVSTA-LRPEA 15== ------------------------------------MEYHNV-SSVL-GNVSSV-LRPDA 16== ------------------------------------ME-------PL-CNASEPPLRPEA 17== ------------------------------------MD-------AL-CNASEPPLRPEA 18== -----------------------------------------------MTNATG----PQM 19== -----------------------------------------------MANVTG----PQM 20== ------------------------------------ME-SFA----VAAAQLG----PH- 21== ------------------------------------ME-SFA----VAAAQLG----PH- 22== ------------------------------------MD-SFA----AVATQLG----PQ- 23== ------------------------------------MERSHLPETPFDLAHSG----PR- 24== ------------------------------------MERSLLPEPPLAMALLG----PR- 25== -----------------------------------------------MIAVSG----PS- 26== ------------------------------------------MANQLSYSSLGW---P-- 27== ------------------------------------------------------------ 28== ------------------------------------------------------------ 1== -----------------------------------------------------MNGT-E- 2== -----------------------------------------------------MNGT-E- 4=p -----------------------------------------------------MNGT-E- 5=p -----------------------------------------------------MNGT-E- 3== -----------------------------------------------------MNGT-E- 6== -----------------------------------------------------MKQVPEF 7== -----------------------------------------------------MRKMSE- 9== -----------------------------------------MAQQWSLQRLAGRHPQDSY 10== -----------------------------------------MAQQWSLQRLAGRHPQDSY 8=opsin_ ------------------------------------------------------------ 11== -----------------------------------------MTEAWNVAVFAARRSRDD- 12== -----------------------------------------MA-AWEAA-FAARRRHEE- 13== ------------------------------------------------------------ 30== ------------------------------------------------------------ 31=p ------------------------------------------------------------ 29== ---------------------MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDGGADP 32== -----------------------------------------------MDVL-SPGQ-GNN 33=p -----------------------------------------------MDVF-SFGQ-GNN 34== MANFTFGDLALDVARM-GGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFING 35=p MANFTFGDLALDVARM-GGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFING 36== ---------------MEGAEGQEELDWEALYLRLP-LQ---------NCSWNSTGWEPNW 14== RLSA---ETRLLGWN------VPPEELRH-IPEHWLTYPE-PPES--MNYLLGT---LYI 15== RLSA---ESRLLGWN------VPPDELRH-IPEHWLIYPE-PPES--MNYLLGT---LYI 16== R-SSGNGDLQFLGWN------VPPDQIQY-IPEHWLTQLE-PPAS--MHYMLGV---FYI 17== RMSSGSDELQFLGWN------VPPDQIQY-IPEHWLTQLE-PPAS--MHYMLGV---FYI 18== AYYGAASMDFGYPEGVSIVDFVRPE-IKPYVHQHWYNY---PPVNPMWHYLLGV---IYL 19== AFYGSGAATFGYPEGMTVADFV-PDRVKHMVLDHWYNY---PPVNPMWHYLLGV---VYL 20== -F-A-PL------SNGSVVDKVTPD-MAHLISPYWNQF---PAMDPIWAKILTA---YMI 21== -F-A-PL------SNGSVVDKVTPD-MAHLISPYWNQF---PAMDPIWAKILTA---YMI 22== -F-AAP-------SNGSVVDKVTPD-MAHLISPYWDQF---PAMDPIWAKILTA---YMI 23== -FQAQSS------GNGSVLDNVLPD-MAHLVNPYWSRFA--P-MDPMMSKILGL---FTL 24== -FEAQTG------GNRSVLDNVLPD-MAPLVNPHWSRFA--P-MDPTMSKILGL---FTL 25== -YEAFSYGGQARFNNQTVVDKVPPD-MLHLIDANWYQY---PPLNPMWHGILG----FVI 26== -Y--QP--------NASVVDTMPKE-MLYMIHEHWYAF---PPMNPLWYSILGV---AMI 27== -----MVESTTLV-NQTW--WYNPTVDIH---PHWAKFDPIP--DAVYYS-VG----IFI 28== -----M--GRDLRDNETW--WYNPSIVVH---PHWREFDQVP--DAVYYS-LG----IFI 1== GDNFYV-PF----SNKTGLARSPYE------YPQY-YLA------EPWKYSALA---AYM 2== GPNFYV-PF----SNITGVVRSPFE------QPQY-YLA------EPWQFSMLA---AYM 4=p GKNFYV-PM----SNRTGLVRSPFE------YPQY-YLA------EPWQFKILA---LYL 5=p GNNFYV-PL----SNRTGLVRSPFE------YPQY-YLA------EPWQFKLLA---VYM 3== GINFYV-PM----SNKTGVVRSPFE------YPQY-YLA------EPWKYRLVC---CYI 6== HEDFYI-PIPLDINNLSAY--SPFL------VPQD-HLG------NQGIFMAMS---VFM 7== -EEFYLF------KNISSV--GPWD------GPQY-HIA------PVWAFYLQA---AFM 9== EDSTQSSIFTYTNSNST---RGPFE------GPNY-HIA------PRWVYHLTS---VWM 10== EDSTQSSIFTYTNSNST---RGPFE------GPNY-HIA------PRWVYHLTS---VWM 8=opsin_ ------------------------------------------------------------ 11== DDTTRGSVFTYTNTNNT---RGPFE------GPNY-HIA------PRWVYNLVS---FFM 12== EDTTRDSVFTYTNSNNT---RGPFE------GPNY-HIA------PRWVYNLTS---VWM 13== ----MSSNSSQAPPNGT---PGPFD------GPQWPYQA------PQSTYVGVA---VLM 30== -----MPHLLSGFLEVTASPAPT----WDAPPDNVSGCGEQINYGRVEKVVIGS----IL 31=p -----MPHLLSGFLEVTASPAPT----WDAPPDNVSGCGEQINYGRVEKVVIGS----IL 29== VAGSWAPHLLS---EVTASPAPT----WDAPPDNASGCGEQINYGRVEKVVIGS----IL 32== TTSPPAPFETGG--NTTGISDVTVS-YQ----------------------VITS---LLL 33=p TTASQEPFGTGG--NVTSISDVTFS-YQ----------------------VITS---LLL 34== SHSSRSRDNASA--NDTSATNMTDDRYW------------SLTVYSHEHLVLTS---VIL 35=p SHSSRSRDNASA--NDTSATNMTDDRYW------------SLTVYSHEHLVLTS---VIL 36== --------------NVTVVPNTT---WWQA----------SAPFDTPAALVRAAAKAVVL 14== -FFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDF-MMMVK-TPIFIYNSFHQGY 15== -FFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDF-MMMIK-TPIFIYNSFHQGY 16== -FLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL-IMCLK-APIF--NSFHRGF 17== -FLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL-IMCLK-APIFIYNSFHRGF 18== -FLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCFSGG- 19== -FLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCFSGG- 20== -MIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYFE-- 21== -MIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYFE-- 22== -IIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYFE-- 23== -AIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYYE-- 24== -VILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYYE-- 25== GMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCYYE-- 26== -ILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCFAE-- 27== GVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMK-- 28== GICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK-- 1== FFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSMNGY- 2== FLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGY- 4=p FFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAINGY- 5=p FFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAINGY- 3== FFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAWNGY- 6== FFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFFNRY- 7== GTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFSVFPV-FVASCNGY- 9== IFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQVYGY- 10== IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQVSGY- 8=opsin_ --------------------------------------DLAETVIA-STISIVNQVSGY- 11== IIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQIFGY- 12== IFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQISGY- 13== GTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNINGF- 30== TLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGG- 31=p TLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGG- 29== TLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGG- 32== GTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVLN-- 33=p GTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVLN-- 34== GLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEISK-- 35=p GLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEISK-- 36== GLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEVVQ-- . . 14== A--LGHLGCQIFGIIGSYTGIAAGA-TNAFIAYDRFNVITRPMEG-K-MTHGKAIAMIIF 15== A--LGHLGCQIFGVIGSYTGIAAGA-TNAFIAYDRYNVITRPMEG-K-MTHGKAIAMIIF 16== AIYLGNTWCQIFASIGSYSGIGAGM-TNAAIGYDRYNVITKPMNR-N-MTFTKAVIMNII 17== A--LGNTWCQIFASIGSYSGIGAGM-TNAAIGYDRYNVITKPMNR-N-MTFTKAVIMNII 18== VWMFSPQYCEIYACLGAITGVC-SIWLLCMISFDRYNIICNGFNG-PKLTTGKAVVFALI 19== RWMFSGTYCEIYAALGAITGVC-SIWTLCMISFDRYNIICNGFNG-PKLTQGKATFMCGL 20== TWVLGPMMCDIYAGLGSAFG-CSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKM-- 21== TWVLGPMMCDIYAGLGSAFG-CSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAY 22== TWVLGPMMCDIYAGLGSAFG-CSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAY 23== TWVLGPLWCDIYAGCGSLFG-CVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIMKILF 24== TWVLGPLWCDIYAACGSLFG-CVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIMKIAF 25== TWVLGPLFCQIYAMLGSLFG-CGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALIRIIA 26== TWILGPFMCEVYGMAGSLFG-CASIWSMVMITLDRYNVIVRGMAA-APLTHKKATLLLLF 27== KWIFGKVACQLYGLLGGIFG-FMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIF 28== KWIFGFAACKVYGFIGGIFG-FMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIF 1== -FVFGPTMCSIEGFFATLGG-EVALWSLVVLAIERYIVICKPM-GNFRFGNTHAIMGVAF 2== -FVFGPTGCNLEGFFATLGG-EIGLWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGVAF 4=p -FVLGPTGCAVEGFMATLGG-EVALWSLVVLAIERYIVVCKPM-GSFKFSSSHAFAGIAF 5=p -FALGPTGCAVEGFMATLGG-EVALWSLVVLAIERYIVVCKPM-GSFKFSSTHASAGIAF 3== -FVFGPVGCAVEGFFATLGG-QVALWSLVVLAIERYIVVCKPM-GNFRFSATHAMMGIAF 6== -FIFGATACKIEGFLATLGG-MVGLWSLAVVAFERWLVICKPL-GNFTFKTPHAIAGCIL 7== -FVFGRHVCALEGFLGTVAG-LVTGWSLAFLAFERYIVICKPF-GNFRFSSKHALTVVLA 9== -FVLGHPMCVLEGYTVSLCG-ITGLWSLAIISWERWMVVCKPF-GNVRFDAKLAIVGIAF 10== -FVLGHPMCVLEGYTVSLCG-ITGLWSLAIISWERWLVVCKPF-GNVRFDAKLAIVGIAF 8=opsin_ -FVLGHPMCVLEGYTVSLCG-ITGLWSLAIISWERWLVVCKPF-GNVRFDAKLAIVGIAF 11== -FILGHPLCVIEGYVVSSCG-ITGLWSLAIISWERWFVVCKPF-GNIKFDSKLAIIGIVF 12== -FILGHPMCVVEGYTVSACG-ITALWSLAIISWERWFVVCKPF-GNIKFDGKLAVAGILF 13== -FVFGRRMCELEGFMVSLTG-IVGLWSLAILALERYVVVCKPL-GDFQFQRRHAVSGCAF 30== KWIFGHFFCNVFIAMDVMCC-TASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILS 31=p KWIFGHFFCNVFIAMDVMCC-TASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILS 29== KWIFGHFFCNVFIAMDVMCC-TASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILS 32== KWTLGQVTCDLFIALDVLCC-TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISL 33=p KWTLGQVTCDLFIALDVLCC-TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISL 34== VWFLHSEVCDMWISVDVLCC-TASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMV 35=p VWFLHSEVCDMWISVDVLCC-TASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMV 36== RWTLGPELCDMWTSGDVLCC-TASILHLVAIALDRYWAVTN-IDYIHASTAKRVGMMIAC : * : : :*: : : 14== IYMYATPWV-VACYTETW------GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIFFFS 15== IYLYATPWV-VACYTESW------GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIFFFS 16== IWLYCTPWV-VLPLTQFW------DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIFFFS 17== IWLYCTPWV-VLPLTQFW------DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIFLFS 18== SWVIAIGCA-LPPFF-GW------GNYILEGILDSCSYDYLT--QDFNTFSYNIFIFVFD 19== AWVISVGWS-LPPFF-GW------GSYTLEGILDSCSYDYFT--RDMNTITYNICIFIFD 20== --------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIFYSIFV 21== IWFMSSIWC-LAPAF-GW------SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYSIFV 22== IWFMSTIWCCLAPVF-GW------SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYSIFV 23== IWMMAVFWT-VMPLI-GW------SAYVPEGNLTACSIDYMT--RMWNPRSYLITYSLFV 24== IWMMAVFWT-IMPLI-GW------SSYVPEGNLTACSIDYMT--RQWNPRSYLITYSLFV 25== IWLFSLGWT-IAPMF-GW------NRYVPEGNMTACGTDYFN--RGLLSASYLVCYGIWV 26== VWIWSGGWT-ILPFF-GW------SRYVPEGNLTSCTVDYLT--KDWSSASYVVIYGLAV 27== VWMWSIVWS-VGPVF-NW------GAYVPEGILTSCSFDYLS--TDPSTRSFILCMYFCG 28== VWLWSVLWA-IGPIF-GW------GAYTLEGVLCNCSFDYIS--RDSTTRSNILCMFILG 1== TWIMALACA-APPLV-GW------SRYIPEGMQCSCGPDYYTLNPNFNNESYVVYMFVVH 2== TWVMALACA-APPLV-GW------SRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVH 4=p TWVMALACA-APPLF-GW------SRYIPEGMQCSCGPDYYTLNPDYNNESYVIYMFVCH 5=p TWVMAMACA-APPLV-GW------SRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMFICH 3== TWVMAFSCA-APPLF-GW------SRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIH 6== PWISALAAS-LPPLF-GW------SRYIPEGLQCSCGPDWYTTNNKYNNESYVMFLFCFC 7== TWTIGIGVS-IPPFF-GW------SRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFC 9== SWIWAAVWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTC 10== SWIWSAVWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTC 8=opsin_ SWIWAAVWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTC 11== SWVWAWGWS-APPIF-GW------SRYWPHGLKTSCGPDVFSGSVELGCQSFMLTLMITC 12== SWLWSCAWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTC 13== TWGWALLWS-APPLL-GW------SSYVPEGLRTSCGPNWYTGGS--NNNSYILSLFVTC 30== VWLLSASIT-LPPLF-GW-----AQNVNDDKV---CLIS--------QDFGYTIYSTAVA 31=p VWLLSASIT-LPPLF-GW-----AQNVNDDKV---CLIS--------QDFGYTIYSTAVA 29== VWLLSASIT-LPPLF-GW-----AQNVNDDKV---CLIS--------QDFGYTIYSTAVA 32== TWLIGFLIS-IPPML-GWRTPE--DRSDPDA----CTIS--------KDHGYTIYSTFGA 33=p TWLIGFLIS-IPPML-GWRTPE--DRSDPDA----CTIS--------KDHGYTIYSTFGA 34== VWIVALFIS-IPPLF-GWRDPN-N---DPDKTG-TCIIS--------QDKGYTIFSTVGA 35=p VWIVALFIS-IPPLF-GWRDPN-N---DPDKTG-TCIIS--------QDKGYTIFSTVGA 36== VWTVSFFVC-IAQLL-GWKDPDWNQRVSEDL---RCVVS--------QDVGYQIFATASS . * . 14== FVCPTTMITYYYSQIVGHVFSHEKAL---------------------------------- 15== FVCPTTMITYYYSQIVGHVFSHEKAL---------------------------------- 16== FVCPTLMILYYYSQIVGHVFSHEKAL---------------------------------- 17== FVVPTLMILYYYSQIVGHVFNHEKAL---------------------------------- 18== YFLPAAIIVFSYVFIVKAIFAHEAAM---------------------------------- 19== FFLPASVIVFSYVFIVKAIFAHEAAM---------------------------------- 20== YYIPLFLICYSYWFIIAAVSAHEKAM---------------------------------- 21== YYIPLFLICYSYWFIIAAVSAHEKAM---------------------------------- 22== YYIPLFLICYSYWFIIAAVSAHEKAM---------------------------------- 23== YYTPLFLICYSYWFIIAAVAAHEKAM---------------------------------- 24== YYTPLFMICYSYWFIIATVAAHEKAM---------------------------------- 25== YFVPLFLIIYSYWFIIQAVAAHEKNM---------------------------------- 26== YFLPLITMIYCYFFIVHAVAEHEKQL---------------------------------- 27== FMLPIIIIAFCYFNIVMSVSNHEKEM---------------------------------- 28== FFGPILIIFFCYFNIVMSVSNHEKEM---------------------------------- 1== FLVPFVIIFFCYGRLLCTV----------------------------------------- 2== FTIPMIVIFFCYGQLVFTV----------------------------------------- 4=p FILPVAVIFFTYGRLVCTV----------------------------------------- 5=p FILPVTIIFFTYGRLVCTV----------------------------------------- 3== FIIPVVVIFFSYGRLICKV----------------------------------------- 6== FAVPFGTIVFCYGQLLITL----------------------------------------- 7== FIVPLSLICFSYTQLLRAL----------------------------------------- 9== CITPLSIIVLCYLQVWLAI----------------------------------------- 10== CIIPLAIIMLCYLQVWLAI----------------------------------------- 8=opsin_ CITPLSIIVLCYLQVWLAI----------------------------------------- 11== CFLPLFIIIVCYLQVWMAI----------------------------------------- 12== CFFPLAIIILCYLQVWLAI----------------------------------------- 13== FVLPLSLILFSYTNLLLTL----------------------------------------- 30== FYIPMSVMLFMYYQIYKAARKSAAK--HKF-------------------P---------- 31=p FYIPMSVMLFMYYQIYKAARKSAAK--HKF-------------------P---------- 29== FYIPMSVMLFMYYQIYKAARKSAAK--HKF-------------------P---------- 32== FYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADTRHGASP----APQPKKS----VN 33=p FYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKKGAGTSLGTSS----APPPKKS----LN 34== FYLPMLVMMIIYIRIWLVARSRIRK--DKFQ--MTKARLKTEETTLVASPKTEY--SVVS 35=p FYLPMLVMMIIYIRIWLVARSRIRK--DKFQ--MTKARLKTEETTLVASPKTEY--SVVS 36== FYVPVLIILILYWRIYQTARKRIRR--RR----GATARGG------VGPPPVPAGGALVA * : * : 14== ----------------------------RDQAKKM----------------NVES----- 15== ----------------------------RDQAKKM----------------NVDS----- 16== ----------------------------REQAKKM----------------NVES----- 17== ----------------------------REQAKKM----------------NVES----- 18== ----------------------------RAQAKKM----------------NVST----- 19== ----------------------------RAQAKKM----------------NVTN----- 20== ----------------------------REQAKKM----------------NVKS----- 21== ----------------------------REQAKKM----------------NVKS----- 22== ----------------------------REQAKKM----------------NVKS----- 23== ----------------------------REQAKKM----------------NVKS----- 24== ----------------------------RDQAKKM----------------NVKS----- 25== ----------------------------REQAKKM----------------NVAS----- 26== ----------------------------REQAKKM----------------NVAS----- 27== ----------------------------AAMAKRL----------------NAKE----- 28== ----------------------------AAMAKRL----------------NAKE----- 1== ----------------------------KEAAAA-------------------------- 2== ----------------------------KEAAAQ-------------------------- 4=p ----------------------------KAAAAQ-------------------------- 5=p ----------------------------KAAAAQ-------------------------- 3== ----------------------------REAAAQ-------------------------- 6== ----------------------------KLAAKA-------------------------- 7== ----------------------------KAVAAQ-------------------------- 9== ----------------------------RAVAKQ-------------------------- 10== ----------------------------RAVAKQ-------------------------- 8=opsin_ ----------------------------RAVAKQ-------------------------- 11== ----------------------------RAVAAQ-------------------------- 12== ----------------------------RAVAAQ-------------------------- 13== ----------------------------RAAAAQ-------------------------- 30== ------------------------G-FPRVQ---------PESVISLNGVVKLQK----- 31=p ------------------------G-FPRVQ---------PESVISLNGVVKLQK----- 29== ------------------------G-FPRVE---------PDSVIALNGIVKLQK----- 32== GESGSRNWRLGVESKAGGALCAN-G-AVRQGDDGAALEVIE-----VHRVGNSKEHLPL- 33=p GQPGSGDWRRCAENRAVGTPCTN-G-AVRQGDDEATLEVIE-----VHRVGNSKEHLPL- 34== DCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQI 35=p DCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQI 36== ---GGGSGGIAA------AVVAVIG---RP---------LP----------TISE----- 14== ---------------------LRSNV-DKNKE---------------------------- 15== ---------------------LRSNV-DKSKE---------------------------- 16== ---------------------LRSNV-DKSKE---------------------------- 17== ---------------------LRSNV-DKSKE---------------------------- 18== ---------------------LRSNEADAQR----------------------------- 19== ---------------------LRSNEAETQR----------------------------- 20== ---------------------LRSSE-DAEK----------------------------- 21== ---------------------LRSSE-DAEK----------------------------- 22== ---------------------LRSSE-DADK----------------------------- 23== ---------------------LRSSE-DCDK----------------------------- 24== ---------------------LRSSE-DCDK----------------------------- 25== ---------------------LRSSE-NQNT----------------------------- 26== ---------------------LRANA-DQQKQ---------------------------- 27== ---------------------LRKAQ---AGA---------------------------- 28== ---------------------LRKAQ---AGA---------------------------- 1== ----------------------QQESASTQK----------------------------- 2== ----------------------QQESATTQK----------------------------- 4=p ----------------------QQDSASTQK----------------------------- 5=p ----------------------QQDSASTQK----------------------------- 3== ----------------------QQESATTQK----------------------------- 6== ----------------------QADSASTQK----------------------------- 7== ----------------------QQESATTQK----------------------------- 9== ----------------------QKESESTQK----------------------------- 10== ----------------------QKESESTQK----------------------------- 8=opsin_ ----------------------QKESESTQK----------------------------- 11== ----------------------QKESESTQK----------------------------- 12== ----------------------QKESESTQK----------------------------- 13== ----------------------QKEADTTQR----------------------------- 30== ---------------------EVEECAN------------------------LSRLLKHE 31=p ---------------------EVEECAN------------------------LSRLLKHE 29== ---------------------EVEECAN------------------------LSRLLKHE 32== ---PSEAGPTPCA----PASFERKNERNAEA----------------------KR----- 33=p ---PSESGSNSYA----PACLERKNERNAEA----------------------KR----- 34== QIETAEAFANGCAEEASIAMLERQ-CNNGKKISSNDTP---Y---------SRTR----E 35=p QIETAEAFANGCAEEASIAMLERQ-CNNGKKISSNDTP---Y---------SRTR----E 36== --TTTTGFTNVSSNNTSP---EKQSCANGLE---ADPPTTGYGAVAAAYYPSLVRRKPKE 14== -------TAEIRIAKAAITICFLFFCSWTPYGVM-SLIGAF----GDKTLLTPGATMIPA 15== -------AAEIRIAKAAITICFLFFASWTPYGVM-SLIGAF----GDKTLLTPGATMIPA 16== -------TAEIRIAKAAITICFLFFVSWTPYGVM-SLIGAF----GDKSLLTQGATMIPA 17== -------TAEIRIAKAAITICFLFFVSWTPYGVM-SLIGAF----GDKSLLTPGATMIPA 18== --------AEIRIAKTALVNVSLWFICWTPYALI-SLKGVMGDTSG----ITPLVSTLPA 19== --------AEIRIAKTALVNVSLWFICWTPYAAI-TIQGLLGNAEG----ITPLLTTLPA 20== -------SAEGKLAKVALVTITLWFMAWTPYLVINCM-GLF-KFEG----LTPLNTIWGA 21== -------SAEGKLAKVALVTITLWFMAWTPYLVINCM-GLF-KFEG----LTPLNTIWGA 22== -------SAEGKLAKVALVTISLWFMAWTPYLVINCM-GLF-KFEG----LTPLNTIWGA 23== -------SAEGKLAKVALTTISLWFMAWTPYLVI-CYFGLF-KIDG----LTPLTTIWGA 24== -------SAENKLAKVALTTISLWFMAWTPYLII-CYFGLF-KIDG----LTPLTTIWGA 25== -------SAECKLAKVALMTISLWFMAWTPYLVI-NFSGIF-NLVK----ISPLFTIWGS 26== -------SAECRLAKVAMMTVGLWFMAWTPYLII-SWAGVF-S-SGTR--LTPLATIWGS 27== -------SAEMKLAKISMVIITQFMLSWSPYAII-ALLAQF----GPAEWVTPYAAELPV 28== -------NAEMRLAKISIVIVSQFLLSWSPYAVV-ALLAQF----GPLEWVTPYAAQLPV 1== --------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFTH---QGSD--FGATFMTLPA 2== --------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFTH---QGSN--FGPIFMTLPA 4=p --------AEREVTKMVILMVFGFLIAWTPYATVAAWIFFN---KGAD--FSAKFMAIPA 5=p --------AEREVTKMVILMVLGFLVAWTPYATVAAWIFFN---KGAA--FSAQFMAIPA 3== --------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTN---KGAD--FTATLMAVPA 6== --------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVSH---RGEE--FDLRMATIPS 7== --------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNN---RNHG--LDLRLVTIPS 9== --------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAAN---PGYP--FHPLMAALPA 10== --------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAAN---PGYA--FHPLMAALPA 8=opsin_ --------AEKEVTRMVVVMVLAFC----------------------------------- 11== --------AEREVSRMVVVMIVAFCICWGPYASFVSFAAAN---PGYA--FHPLAAALPA 12== --------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAAN---PGYA--FHPLAAALPA 13== --------AEREVTRMVIVMVMAFLLCWLPYSTFALVVATH---KGII--IQPVLASLPS 30== RKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPLWVERTCL 31=p RKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPLWVERTCL 29== RKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPLWVERTFL 32== KMAL---ARERKTVKTLGIIMGTFILCWLPFFIVALVLPF---CESSCH-MPTLLGAIIN 33=p KMAL---ARERKTVKTLGIIMGTFILCWLPFFIVALVLPF---CESSCH-MPALLGAIIN 34== KLEL---KRERKAARTLAIITGAFLICWLPFFIIALIGPF---VD--PEGIPPFARSFVL 35=p KLEL---KRERKAARTLAIITGAFLICWLPFFIIALIGPF---VD--PEGIPPFARSFVL 36== AADS---KRERKAAKTLAIITGAFVACWLPFFVLAILVPT---CD--CE-VSPVLTSLSL * . : 14== CACKMVACIDPFVYAISHPRYRMELQKRCP--WLALNE--KAPESSAVASTSTTQEP-QQ 15== CTCKMVACIDPFVYAISHPRYRMELQKRCP--WLAISE--KAPESRAAISTSTTQEQ-QQ 16== CTCKLVACIDPFVYAISHPRYRLELQKRCP--WLGVNE--KSGEISSAQST-TTQEQ-QQ 17== CTCKLVACIEPFVYAISHPRYRMELQKRCP--WLGVNE--KSGEASSAQST-TTQEQTQQ 18== LLAKSCSCYNPFVYAISHPKYRLAITQHLP--WFCV-H--ETETKSND----DSQSN--S 19== LLAKSCSCYNPFVYAISHPKFRLAITQHLP--WFCV-H--EKDP--NDV--EENQSS--N 20== CFAKSAACYNPIVYGISHPKYRLALKEKCP---CCVFG--KVD----DGKSSDAQSQ--A 21== CFAKSAACYNPIVYGISHPKYRLALKEKCP---CCVFG--KVD----DGKSSDAQSQ--A 22== CFAKSAACYNPIVYGISHPKYRLALKEKCP---CCVFG--KVD----DGKSSEAQSQ--A 23== TFAKTSAVYNPIVYGISHPKYRIVLKEKCP---MCVFG--NTDEPKPDAPASDTE----- 24== TFAKTSAVYNPIVYGISHPNDRLVLKEKCP---MCVCG--TTDEPKPDAPPSDTE----- 25== LFAKANAVYNPIVYGISHPKYRAALFAKFPS-LACA------AEPSSDA-VSTTSGT--T 26== VFAKANSCYNPIVYGISHPRYKAALYQRFPS-LACGSG-----ESGSDV---KSEAS--A 27== LFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQF--DEKE-CEDANDAEEEVVASE 28== MFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF--DDKE-TEDDKDAETEIPAGE 1== FFAKSSALYNPVIYILMNKQFRNCMITTLC----CGKNPLGDDE--SGASTSKTEVSSVS 2== FFAKTASIYNPIIYIMMNKQFRNCMLTSLC----CGKNPLGDDE--ASATASKTE----- 4=p FFSKSSALYNPVIYVLLNKQFRNCMLTTIF----CGKNPLGDDE-SSTVSTSKTEVSSVS 5=p FFSKTSALYNPVIYVLLNKQFRSCMLTTLF----CGKNPLGDEE-SSTVSTSKTEVSSVS 3== FFSKSSSLYNPIIYVLMNKQFRNCMITTIC----CGKNPFGDEDVSSTVSQSKTEVSSVS 6== CLSKASTVYNPVIYVLMNKQFRSCMMKMV-----CGKN-IEEDE--ASTSSQVTQVSSVA 7== FFSKSACIYNPIIYCFMNKQFQACIMKMV-----CGKA-MTDES--DTCSSQKTEVSTVS 9== FFAKSATIYNPVIYVFMNRQFRNCILQLF------G---KKVDDGSELSSASKTEVSSVS 10== YFAKSATIYNPVIYVFMNRQFRNCILQLF------G---KKVDDGSELSSASKTEVSSVS 8=opsin_ ------------------------------------------------------------ 11== YFAKSATIYNPVIYVFMNRQFRNCIMQLF------G---KKVDDGSEASTTSRTEVSSVS 12== YFAKSATIYNPIIYVFMNRQFRNCILQLF------G---KKVDDGSEVST-SRTEVSSVS 13== YFSKTATVYNPIIYVFMNKQFQSCLLEMLC----CGYQPQRTGKASPGTPGPHADVTAAG 30== WLGYANSLINPFIYAFFNRDLRPTSRSLLQ----CQY-RNINRKLSAAGMHEALKLAERP 31=p WLGYANSLINPFIYAFFNRDLRTTYRSLLQ----CQY-RNINRKLSAAGMHEALKLAERP 29== WLGYANSLINPFIYAFFNRDLRTTYRSLLQ----CQY-RNINRKLSAAGMHEALKLAERP 32== WLGYSNSLLNPVIYAYFNKDFQNAFKKIIK----CKFCRQ-------------------- 33=p WLGYSNSLLNPVIYAYFNKDFQNAFKKIIK----CKFCRR-------------------- 34== WLGYFNSLLNPIIYTIFSPEFRSAFQKIL-----FGKYRRGHR----------------- 35=p WLGYFNSLLNPIIYTIFSPEFRSAFQKIL-----FGKYRRGHR----------------- 36== WLGYFNSTLNPVIYTVFSPEFRHAFQRLL-----CG--RRVRRRRAPQ------------ 14== TTAA-------------------------------------------------------- 15== TTAA-------------------------------------------------------- 16== TTAA-------------------------------------------------------- 17== TSAA-------------------------------------------------------- 18== TVAQDKA----------------------------------------------------- 19== TQTQEKS----------------------------------------------------- 20== TASEAE-SKA-------------------------------------------------- 21== TASEAE-SKA-------------------------------------------------- 22== TTSEAE-SKA-------------------------------------------------- 23== TTSEAD-SKA-------------------------------------------------- 24== TTSEAE-SKD-------------------------------------------------- 25== TVTDNEKSNA-------------------------------------------------- 26== TTTMEEKPKIPEA----------------------------------------------- 27== R--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PPQGYPPQGAYPPPQGYPP 28== SSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPPQGYPPQG-YPP-QGYPP 1== T-SPVSPA---------------------------------------------------- 2== T-SQVAPA---------------------------------------------------- 4=p ------PA---------------------------------------------------- 5=p ------PA---------------------------------------------------- 3== S-SQVSPA---------------------------------------------------- 6== ------PEK--------------------------------------------------- 7== S-TQVGPN---------------------------------------------------- 9== ---SVSPA---------------------------------------------------- 10== ---SVSPA---------------------------------------------------- 8=opsin_ ------------------------------------------------------------ 11== N-SSVAPA---------------------------------------------------- 12== N-SSVSPA---------------------------------------------------- 13== LRNKVMPAHPV------------------------------------------------- 30== ERSEFVLQNSDHCGKKGHDT---------------------------------------- 31=p ERSEFVLQNSDHCGKKGHDT---------------------------------------- 29== ERPEFVLQNADYCRKKGHDS---------------------------------------- 32== ------------------------------------------------------------ 33=p ------------------------------------------------------------ 34== ------------------------------------------------------------ 35=p ------------------------------------------------------------ 36== ------------------------------------------------------------ 14== ---------------------------------------- 15== ---------------------------------------- 16== ---------------------------------------- 17== ---------------------------------------- 18== ---------------------------------------- 19== ---------------------------------------- 20== ---------------------------------------- 21== ---------------------------------------- 22== ---------------------------------------- 23== ---------------------------------------- 24== ---------------------------------------- 25== ---------------------------------------- 26== ---------------------------------------- 27== QGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA 28== QGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA 1== ---------------------------------------- 2== ---------------------------------------- 4=p ---------------------------------------- 5=p ---------------------------------------- 3== ---------------------------------------- 6== ---------------------------------------- 7== ---------------------------------------- 9== ---------------------------------------- 10== ---------------------------------------- 8=opsin_ ---------------------------------------- 11== ---------------------------------------- 12== ---------------------------------------- 13== ---------------------------------------- 30== ---------------------------------------- 31=p ---------------------------------------- 29== ---------------------------------------- 32== ---------------------------------------- 33=p ---------------------------------------- 34== ---------------------------------------- 35=p ---------------------------------------- 36== ----------------------------------------