view test-data/rgClustal_testout03.aln @ 7:5b097fde95dd draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/clustalw commit 4048394d36408ccfeca401a84c4909a6c023e30e
author iuc
date Thu, 02 Nov 2023 10:44:37 +0000
parents d9c2b2fde6a3
children
line wrap: on
line source

CLUSTAL 2.1 multiple sequence alignment


14==            ------------------------------------MESGNV-SSSLFGNVSTA-LRPEA
15==            ------------------------------------MEYHNV-SSVL-GNVSSV-LRPDA
16==            ------------------------------------ME-------PL-CNASEPPLRPEA
17==            ------------------------------------MD-------AL-CNASEPPLRPEA
18==            -----------------------------------------------MTNATG----PQM
19==            -----------------------------------------------MANVTG----PQM
20==            ------------------------------------ME-SFA----VAAAQLG----PH-
21==            ------------------------------------ME-SFA----VAAAQLG----PH-
22==            ------------------------------------MD-SFA----AVATQLG----PQ-
23==            ------------------------------------MERSHLPETPFDLAHSG----PR-
24==            ------------------------------------MERSLLPEPPLAMALLG----PR-
25==            -----------------------------------------------MIAVSG----PS-
26==            ------------------------------------------MANQLSYSSLGW---P--
27==            ------------------------------------------------------------
28==            ------------------------------------------------------------
1==             -----------------------------------------------------MNGT-E-
2==             -----------------------------------------------------MNGT-E-
4=p             -----------------------------------------------------MNGT-E-
5=p             -----------------------------------------------------MNGT-E-
3==             -----------------------------------------------------MNGT-E-
6==             -----------------------------------------------------MKQVPEF
7==             -----------------------------------------------------MRKMSE-
9==             -----------------------------------------MAQQWSLQRLAGRHPQDSY
10==            -----------------------------------------MAQQWSLQRLAGRHPQDSY
8=opsin_        ------------------------------------------------------------
11==            -----------------------------------------MTEAWNVAVFAARRSRDD-
12==            -----------------------------------------MA-AWEAA-FAARRRHEE-
13==            ------------------------------------------------------------
30==            ------------------------------------------------------------
31=p            ------------------------------------------------------------
29==            ---------------------MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDGGADP
32==            -----------------------------------------------MDVL-SPGQ-GNN
33=p            -----------------------------------------------MDVF-SFGQ-GNN
34==            MANFTFGDLALDVARM-GGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFING
35=p            MANFTFGDLALDVARM-GGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFING
36==            ---------------MEGAEGQEELDWEALYLRLP-LQ---------NCSWNSTGWEPNW
                                                                            

14==            RLSA---ETRLLGWN------VPPEELRH-IPEHWLTYPE-PPES--MNYLLGT---LYI
15==            RLSA---ESRLLGWN------VPPDELRH-IPEHWLIYPE-PPES--MNYLLGT---LYI
16==            R-SSGNGDLQFLGWN------VPPDQIQY-IPEHWLTQLE-PPAS--MHYMLGV---FYI
17==            RMSSGSDELQFLGWN------VPPDQIQY-IPEHWLTQLE-PPAS--MHYMLGV---FYI
18==            AYYGAASMDFGYPEGVSIVDFVRPE-IKPYVHQHWYNY---PPVNPMWHYLLGV---IYL
19==            AFYGSGAATFGYPEGMTVADFV-PDRVKHMVLDHWYNY---PPVNPMWHYLLGV---VYL
20==            -F-A-PL------SNGSVVDKVTPD-MAHLISPYWNQF---PAMDPIWAKILTA---YMI
21==            -F-A-PL------SNGSVVDKVTPD-MAHLISPYWNQF---PAMDPIWAKILTA---YMI
22==            -F-AAP-------SNGSVVDKVTPD-MAHLISPYWDQF---PAMDPIWAKILTA---YMI
23==            -FQAQSS------GNGSVLDNVLPD-MAHLVNPYWSRFA--P-MDPMMSKILGL---FTL
24==            -FEAQTG------GNRSVLDNVLPD-MAPLVNPHWSRFA--P-MDPTMSKILGL---FTL
25==            -YEAFSYGGQARFNNQTVVDKVPPD-MLHLIDANWYQY---PPLNPMWHGILG----FVI
26==            -Y--QP--------NASVVDTMPKE-MLYMIHEHWYAF---PPMNPLWYSILGV---AMI
27==            -----MVESTTLV-NQTW--WYNPTVDIH---PHWAKFDPIP--DAVYYS-VG----IFI
28==            -----M--GRDLRDNETW--WYNPSIVVH---PHWREFDQVP--DAVYYS-LG----IFI
1==             GDNFYV-PF----SNKTGLARSPYE------YPQY-YLA------EPWKYSALA---AYM
2==             GPNFYV-PF----SNITGVVRSPFE------QPQY-YLA------EPWQFSMLA---AYM
4=p             GKNFYV-PM----SNRTGLVRSPFE------YPQY-YLA------EPWQFKILA---LYL
5=p             GNNFYV-PL----SNRTGLVRSPFE------YPQY-YLA------EPWQFKLLA---VYM
3==             GINFYV-PM----SNKTGVVRSPFE------YPQY-YLA------EPWKYRLVC---CYI
6==             HEDFYI-PIPLDINNLSAY--SPFL------VPQD-HLG------NQGIFMAMS---VFM
7==             -EEFYLF------KNISSV--GPWD------GPQY-HIA------PVWAFYLQA---AFM
9==             EDSTQSSIFTYTNSNST---RGPFE------GPNY-HIA------PRWVYHLTS---VWM
10==            EDSTQSSIFTYTNSNST---RGPFE------GPNY-HIA------PRWVYHLTS---VWM
8=opsin_        ------------------------------------------------------------
11==            DDTTRGSVFTYTNTNNT---RGPFE------GPNY-HIA------PRWVYNLVS---FFM
12==            EDTTRDSVFTYTNSNNT---RGPFE------GPNY-HIA------PRWVYNLTS---VWM
13==            ----MSSNSSQAPPNGT---PGPFD------GPQWPYQA------PQSTYVGVA---VLM
30==            -----MPHLLSGFLEVTASPAPT----WDAPPDNVSGCGEQINYGRVEKVVIGS----IL
31=p            -----MPHLLSGFLEVTASPAPT----WDAPPDNVSGCGEQINYGRVEKVVIGS----IL
29==            VAGSWAPHLLS---EVTASPAPT----WDAPPDNASGCGEQINYGRVEKVVIGS----IL
32==            TTSPPAPFETGG--NTTGISDVTVS-YQ----------------------VITS---LLL
33=p            TTASQEPFGTGG--NVTSISDVTFS-YQ----------------------VITS---LLL
34==            SHSSRSRDNASA--NDTSATNMTDDRYW------------SLTVYSHEHLVLTS---VIL
35=p            SHSSRSRDNASA--NDTSATNMTDDRYW------------SLTVYSHEHLVLTS---VIL
36==            --------------NVTVVPNTT---WWQA----------SAPFDTPAALVRAAAKAVVL
                                                                            

14==            -FFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDF-MMMVK-TPIFIYNSFHQGY
15==            -FFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDF-MMMIK-TPIFIYNSFHQGY
16==            -FLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL-IMCLK-APIF--NSFHRGF
17==            -FLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDL-IMCLK-APIFIYNSFHRGF
18==            -FLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCFSGG-
19==            -FLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCFSGG-
20==            -MIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYFE--
21==            -MIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYFE--
22==            -IIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYFE--
23==            -AIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYYE--
24==            -VILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYYE--
25==            GMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCYYE--
26==            -ILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCFAE--
27==            GVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMK--
28==            GICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK--
1==             FFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSMNGY-
2==             FLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGY-
4=p             FFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAINGY-
5=p             FFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAINGY-
3==             FFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAWNGY-
6==             FFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFFNRY-
7==             GTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFSVFPV-FVASCNGY-
9==             IFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQVYGY-
10==            IFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQVSGY-
8=opsin_        --------------------------------------DLAETVIA-STISIVNQVSGY-
11==            IIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQIFGY-
12==            IFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQISGY-
13==            GTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNINGF-
30==            TLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGG-
31=p            TLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGG-
29==            TLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGG-
32==            GTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVLN--
33=p            GTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVLN--
34==            GLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEISK--
35=p            GLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEISK--
36==            GLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEVVQ--
                                                      .         .           

14==            A--LGHLGCQIFGIIGSYTGIAAGA-TNAFIAYDRFNVITRPMEG-K-MTHGKAIAMIIF
15==            A--LGHLGCQIFGVIGSYTGIAAGA-TNAFIAYDRYNVITRPMEG-K-MTHGKAIAMIIF
16==            AIYLGNTWCQIFASIGSYSGIGAGM-TNAAIGYDRYNVITKPMNR-N-MTFTKAVIMNII
17==            A--LGNTWCQIFASIGSYSGIGAGM-TNAAIGYDRYNVITKPMNR-N-MTFTKAVIMNII
18==            VWMFSPQYCEIYACLGAITGVC-SIWLLCMISFDRYNIICNGFNG-PKLTTGKAVVFALI
19==            RWMFSGTYCEIYAALGAITGVC-SIWTLCMISFDRYNIICNGFNG-PKLTQGKATFMCGL
20==            TWVLGPMMCDIYAGLGSAFG-CSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKM--
21==            TWVLGPMMCDIYAGLGSAFG-CSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAY
22==            TWVLGPMMCDIYAGLGSAFG-CSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAY
23==            TWVLGPLWCDIYAGCGSLFG-CVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIMKILF
24==            TWVLGPLWCDIYAACGSLFG-CVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIMKIAF
25==            TWVLGPLFCQIYAMLGSLFG-CGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALIRIIA
26==            TWILGPFMCEVYGMAGSLFG-CASIWSMVMITLDRYNVIVRGMAA-APLTHKKATLLLLF
27==            KWIFGKVACQLYGLLGGIFG-FMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIF
28==            KWIFGFAACKVYGFIGGIFG-FMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIF
1==             -FVFGPTMCSIEGFFATLGG-EVALWSLVVLAIERYIVICKPM-GNFRFGNTHAIMGVAF
2==             -FVFGPTGCNLEGFFATLGG-EIGLWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGVAF
4=p             -FVLGPTGCAVEGFMATLGG-EVALWSLVVLAIERYIVVCKPM-GSFKFSSSHAFAGIAF
5=p             -FALGPTGCAVEGFMATLGG-EVALWSLVVLAIERYIVVCKPM-GSFKFSSTHASAGIAF
3==             -FVFGPVGCAVEGFFATLGG-QVALWSLVVLAIERYIVVCKPM-GNFRFSATHAMMGIAF
6==             -FIFGATACKIEGFLATLGG-MVGLWSLAVVAFERWLVICKPL-GNFTFKTPHAIAGCIL
7==             -FVFGRHVCALEGFLGTVAG-LVTGWSLAFLAFERYIVICKPF-GNFRFSSKHALTVVLA
9==             -FVLGHPMCVLEGYTVSLCG-ITGLWSLAIISWERWMVVCKPF-GNVRFDAKLAIVGIAF
10==            -FVLGHPMCVLEGYTVSLCG-ITGLWSLAIISWERWLVVCKPF-GNVRFDAKLAIVGIAF
8=opsin_        -FVLGHPMCVLEGYTVSLCG-ITGLWSLAIISWERWLVVCKPF-GNVRFDAKLAIVGIAF
11==            -FILGHPLCVIEGYVVSSCG-ITGLWSLAIISWERWFVVCKPF-GNIKFDSKLAIIGIVF
12==            -FILGHPMCVVEGYTVSACG-ITALWSLAIISWERWFVVCKPF-GNIKFDGKLAVAGILF
13==            -FVFGRRMCELEGFMVSLTG-IVGLWSLAILALERYVVVCKPL-GDFQFQRRHAVSGCAF
30==            KWIFGHFFCNVFIAMDVMCC-TASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILS
31=p            KWIFGHFFCNVFIAMDVMCC-TASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILS
29==            KWIFGHFFCNVFIAMDVMCC-TASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILS
32==            KWTLGQVTCDLFIALDVLCC-TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISL
33=p            KWTLGQVTCDLFIALDVLCC-TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISL
34==            VWFLHSEVCDMWISVDVLCC-TASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMV
35=p            VWFLHSEVCDMWISVDVLCC-TASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMV
36==            RWTLGPELCDMWTSGDVLCC-TASILHLVAIALDRYWAVTN-IDYIHASTAKRVGMMIAC
                   :    * :                   :  :*:  :   :                 

14==            IYMYATPWV-VACYTETW------GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIFFFS
15==            IYLYATPWV-VACYTESW------GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIFFFS
16==            IWLYCTPWV-VLPLTQFW------DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIFFFS
17==            IWLYCTPWV-VLPLTQFW------DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIFLFS
18==            SWVIAIGCA-LPPFF-GW------GNYILEGILDSCSYDYLT--QDFNTFSYNIFIFVFD
19==            AWVISVGWS-LPPFF-GW------GSYTLEGILDSCSYDYFT--RDMNTITYNICIFIFD
20==            --------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIFYSIFV
21==            IWFMSSIWC-LAPAF-GW------SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYSIFV
22==            IWFMSTIWCCLAPVF-GW------SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYSIFV
23==            IWMMAVFWT-VMPLI-GW------SAYVPEGNLTACSIDYMT--RMWNPRSYLITYSLFV
24==            IWMMAVFWT-IMPLI-GW------SSYVPEGNLTACSIDYMT--RQWNPRSYLITYSLFV
25==            IWLFSLGWT-IAPMF-GW------NRYVPEGNMTACGTDYFN--RGLLSASYLVCYGIWV
26==            VWIWSGGWT-ILPFF-GW------SRYVPEGNLTSCTVDYLT--KDWSSASYVVIYGLAV
27==            VWMWSIVWS-VGPVF-NW------GAYVPEGILTSCSFDYLS--TDPSTRSFILCMYFCG
28==            VWLWSVLWA-IGPIF-GW------GAYTLEGVLCNCSFDYIS--RDSTTRSNILCMFILG
1==             TWIMALACA-APPLV-GW------SRYIPEGMQCSCGPDYYTLNPNFNNESYVVYMFVVH
2==             TWVMALACA-APPLV-GW------SRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVH
4=p             TWVMALACA-APPLF-GW------SRYIPEGMQCSCGPDYYTLNPDYNNESYVIYMFVCH
5=p             TWVMAMACA-APPLV-GW------SRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMFICH
3==             TWVMAFSCA-APPLF-GW------SRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIH
6==             PWISALAAS-LPPLF-GW------SRYIPEGLQCSCGPDWYTTNNKYNNESYVMFLFCFC
7==             TWTIGIGVS-IPPFF-GW------SRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFC
9==             SWIWAAVWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTC
10==            SWIWSAVWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTC
8=opsin_        SWIWAAVWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTC
11==            SWVWAWGWS-APPIF-GW------SRYWPHGLKTSCGPDVFSGSVELGCQSFMLTLMITC
12==            SWLWSCAWT-APPIF-GW------SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTC
13==            TWGWALLWS-APPLL-GW------SSYVPEGLRTSCGPNWYTGGS--NNNSYILSLFVTC
30==            VWLLSASIT-LPPLF-GW-----AQNVNDDKV---CLIS--------QDFGYTIYSTAVA
31=p            VWLLSASIT-LPPLF-GW-----AQNVNDDKV---CLIS--------QDFGYTIYSTAVA
29==            VWLLSASIT-LPPLF-GW-----AQNVNDDKV---CLIS--------QDFGYTIYSTAVA
32==            TWLIGFLIS-IPPML-GWRTPE--DRSDPDA----CTIS--------KDHGYTIYSTFGA
33=p            TWLIGFLIS-IPPML-GWRTPE--DRSDPDA----CTIS--------KDHGYTIYSTFGA
34==            VWIVALFIS-IPPLF-GWRDPN-N---DPDKTG-TCIIS--------QDKGYTIFSTVGA
35=p            VWIVALFIS-IPPLF-GWRDPN-N---DPDKTG-TCIIS--------QDKGYTIFSTVGA
36==            VWTVSFFVC-IAQLL-GWKDPDWNQRVSEDL---RCVVS--------QDVGYQIFATASS
                                             .     *  .                     

14==            FVCPTTMITYYYSQIVGHVFSHEKAL----------------------------------
15==            FVCPTTMITYYYSQIVGHVFSHEKAL----------------------------------
16==            FVCPTLMILYYYSQIVGHVFSHEKAL----------------------------------
17==            FVVPTLMILYYYSQIVGHVFNHEKAL----------------------------------
18==            YFLPAAIIVFSYVFIVKAIFAHEAAM----------------------------------
19==            FFLPASVIVFSYVFIVKAIFAHEAAM----------------------------------
20==            YYIPLFLICYSYWFIIAAVSAHEKAM----------------------------------
21==            YYIPLFLICYSYWFIIAAVSAHEKAM----------------------------------
22==            YYIPLFLICYSYWFIIAAVSAHEKAM----------------------------------
23==            YYTPLFLICYSYWFIIAAVAAHEKAM----------------------------------
24==            YYTPLFMICYSYWFIIATVAAHEKAM----------------------------------
25==            YFVPLFLIIYSYWFIIQAVAAHEKNM----------------------------------
26==            YFLPLITMIYCYFFIVHAVAEHEKQL----------------------------------
27==            FMLPIIIIAFCYFNIVMSVSNHEKEM----------------------------------
28==            FFGPILIIFFCYFNIVMSVSNHEKEM----------------------------------
1==             FLVPFVIIFFCYGRLLCTV-----------------------------------------
2==             FTIPMIVIFFCYGQLVFTV-----------------------------------------
4=p             FILPVAVIFFTYGRLVCTV-----------------------------------------
5=p             FILPVTIIFFTYGRLVCTV-----------------------------------------
3==             FIIPVVVIFFSYGRLICKV-----------------------------------------
6==             FAVPFGTIVFCYGQLLITL-----------------------------------------
7==             FIVPLSLICFSYTQLLRAL-----------------------------------------
9==             CITPLSIIVLCYLQVWLAI-----------------------------------------
10==            CIIPLAIIMLCYLQVWLAI-----------------------------------------
8=opsin_        CITPLSIIVLCYLQVWLAI-----------------------------------------
11==            CFLPLFIIIVCYLQVWMAI-----------------------------------------
12==            CFFPLAIIILCYLQVWLAI-----------------------------------------
13==            FVLPLSLILFSYTNLLLTL-----------------------------------------
30==            FYIPMSVMLFMYYQIYKAARKSAAK--HKF-------------------P----------
31=p            FYIPMSVMLFMYYQIYKAARKSAAK--HKF-------------------P----------
29==            FYIPMSVMLFMYYQIYKAARKSAAK--HKF-------------------P----------
32==            FYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADTRHGASP----APQPKKS----VN
33=p            FYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKKGAGTSLGTSS----APPPKKS----LN
34==            FYLPMLVMMIIYIRIWLVARSRIRK--DKFQ--MTKARLKTEETTLVASPKTEY--SVVS
35=p            FYLPMLVMMIIYIRIWLVARSRIRK--DKFQ--MTKARLKTEETTLVASPKTEY--SVVS
36==            FYVPVLIILILYWRIYQTARKRIRR--RR----GATARGG------VGPPPVPAGGALVA
                   *   :   *  :                                             

14==            ----------------------------RDQAKKM----------------NVES-----
15==            ----------------------------RDQAKKM----------------NVDS-----
16==            ----------------------------REQAKKM----------------NVES-----
17==            ----------------------------REQAKKM----------------NVES-----
18==            ----------------------------RAQAKKM----------------NVST-----
19==            ----------------------------RAQAKKM----------------NVTN-----
20==            ----------------------------REQAKKM----------------NVKS-----
21==            ----------------------------REQAKKM----------------NVKS-----
22==            ----------------------------REQAKKM----------------NVKS-----
23==            ----------------------------REQAKKM----------------NVKS-----
24==            ----------------------------RDQAKKM----------------NVKS-----
25==            ----------------------------REQAKKM----------------NVAS-----
26==            ----------------------------REQAKKM----------------NVAS-----
27==            ----------------------------AAMAKRL----------------NAKE-----
28==            ----------------------------AAMAKRL----------------NAKE-----
1==             ----------------------------KEAAAA--------------------------
2==             ----------------------------KEAAAQ--------------------------
4=p             ----------------------------KAAAAQ--------------------------
5=p             ----------------------------KAAAAQ--------------------------
3==             ----------------------------REAAAQ--------------------------
6==             ----------------------------KLAAKA--------------------------
7==             ----------------------------KAVAAQ--------------------------
9==             ----------------------------RAVAKQ--------------------------
10==            ----------------------------RAVAKQ--------------------------
8=opsin_        ----------------------------RAVAKQ--------------------------
11==            ----------------------------RAVAAQ--------------------------
12==            ----------------------------RAVAAQ--------------------------
13==            ----------------------------RAAAAQ--------------------------
30==            ------------------------G-FPRVQ---------PESVISLNGVVKLQK-----
31=p            ------------------------G-FPRVQ---------PESVISLNGVVKLQK-----
29==            ------------------------G-FPRVE---------PDSVIALNGIVKLQK-----
32==            GESGSRNWRLGVESKAGGALCAN-G-AVRQGDDGAALEVIE-----VHRVGNSKEHLPL-
33=p            GQPGSGDWRRCAENRAVGTPCTN-G-AVRQGDDEATLEVIE-----VHRVGNSKEHLPL-
34==            DCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQI
35=p            DCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQI
36==            ---GGGSGGIAA------AVVAVIG---RP---------LP----------TISE-----
                                                                            

14==            ---------------------LRSNV-DKNKE----------------------------
15==            ---------------------LRSNV-DKSKE----------------------------
16==            ---------------------LRSNV-DKSKE----------------------------
17==            ---------------------LRSNV-DKSKE----------------------------
18==            ---------------------LRSNEADAQR-----------------------------
19==            ---------------------LRSNEAETQR-----------------------------
20==            ---------------------LRSSE-DAEK-----------------------------
21==            ---------------------LRSSE-DAEK-----------------------------
22==            ---------------------LRSSE-DADK-----------------------------
23==            ---------------------LRSSE-DCDK-----------------------------
24==            ---------------------LRSSE-DCDK-----------------------------
25==            ---------------------LRSSE-NQNT-----------------------------
26==            ---------------------LRANA-DQQKQ----------------------------
27==            ---------------------LRKAQ---AGA----------------------------
28==            ---------------------LRKAQ---AGA----------------------------
1==             ----------------------QQESASTQK-----------------------------
2==             ----------------------QQESATTQK-----------------------------
4=p             ----------------------QQDSASTQK-----------------------------
5=p             ----------------------QQDSASTQK-----------------------------
3==             ----------------------QQESATTQK-----------------------------
6==             ----------------------QADSASTQK-----------------------------
7==             ----------------------QQESATTQK-----------------------------
9==             ----------------------QKESESTQK-----------------------------
10==            ----------------------QKESESTQK-----------------------------
8=opsin_        ----------------------QKESESTQK-----------------------------
11==            ----------------------QKESESTQK-----------------------------
12==            ----------------------QKESESTQK-----------------------------
13==            ----------------------QKEADTTQR-----------------------------
30==            ---------------------EVEECAN------------------------LSRLLKHE
31=p            ---------------------EVEECAN------------------------LSRLLKHE
29==            ---------------------EVEECAN------------------------LSRLLKHE
32==            ---PSEAGPTPCA----PASFERKNERNAEA----------------------KR-----
33=p            ---PSESGSNSYA----PACLERKNERNAEA----------------------KR-----
34==            QIETAEAFANGCAEEASIAMLERQ-CNNGKKISSNDTP---Y---------SRTR----E
35=p            QIETAEAFANGCAEEASIAMLERQ-CNNGKKISSNDTP---Y---------SRTR----E
36==            --TTTTGFTNVSSNNTSP---EKQSCANGLE---ADPPTTGYGAVAAAYYPSLVRRKPKE
                                                                            

14==            -------TAEIRIAKAAITICFLFFCSWTPYGVM-SLIGAF----GDKTLLTPGATMIPA
15==            -------AAEIRIAKAAITICFLFFASWTPYGVM-SLIGAF----GDKTLLTPGATMIPA
16==            -------TAEIRIAKAAITICFLFFVSWTPYGVM-SLIGAF----GDKSLLTQGATMIPA
17==            -------TAEIRIAKAAITICFLFFVSWTPYGVM-SLIGAF----GDKSLLTPGATMIPA
18==            --------AEIRIAKTALVNVSLWFICWTPYALI-SLKGVMGDTSG----ITPLVSTLPA
19==            --------AEIRIAKTALVNVSLWFICWTPYAAI-TIQGLLGNAEG----ITPLLTTLPA
20==            -------SAEGKLAKVALVTITLWFMAWTPYLVINCM-GLF-KFEG----LTPLNTIWGA
21==            -------SAEGKLAKVALVTITLWFMAWTPYLVINCM-GLF-KFEG----LTPLNTIWGA
22==            -------SAEGKLAKVALVTISLWFMAWTPYLVINCM-GLF-KFEG----LTPLNTIWGA
23==            -------SAEGKLAKVALTTISLWFMAWTPYLVI-CYFGLF-KIDG----LTPLTTIWGA
24==            -------SAENKLAKVALTTISLWFMAWTPYLII-CYFGLF-KIDG----LTPLTTIWGA
25==            -------SAECKLAKVALMTISLWFMAWTPYLVI-NFSGIF-NLVK----ISPLFTIWGS
26==            -------SAECRLAKVAMMTVGLWFMAWTPYLII-SWAGVF-S-SGTR--LTPLATIWGS
27==            -------SAEMKLAKISMVIITQFMLSWSPYAII-ALLAQF----GPAEWVTPYAAELPV
28==            -------NAEMRLAKISIVIVSQFLLSWSPYAVV-ALLAQF----GPLEWVTPYAAQLPV
1==             --------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFTH---QGSD--FGATFMTLPA
2==             --------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFTH---QGSN--FGPIFMTLPA
4=p             --------AEREVTKMVILMVFGFLIAWTPYATVAAWIFFN---KGAD--FSAKFMAIPA
5=p             --------AEREVTKMVILMVLGFLVAWTPYATVAAWIFFN---KGAA--FSAQFMAIPA
3==             --------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTN---KGAD--FTATLMAVPA
6==             --------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVSH---RGEE--FDLRMATIPS
7==             --------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNN---RNHG--LDLRLVTIPS
9==             --------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAAN---PGYP--FHPLMAALPA
10==            --------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAAN---PGYA--FHPLMAALPA
8=opsin_        --------AEKEVTRMVVVMVLAFC-----------------------------------
11==            --------AEREVSRMVVVMIVAFCICWGPYASFVSFAAAN---PGYA--FHPLAAALPA
12==            --------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAAN---PGYA--FHPLAAALPA
13==            --------AEREVTRMVIVMVMAFLLCWLPYSTFALVVATH---KGII--IQPVLASLPS
30==            RKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPLWVERTCL
31=p            RKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPLWVERTCL
29==            RKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPLWVERTFL
32==            KMAL---ARERKTVKTLGIIMGTFILCWLPFFIVALVLPF---CESSCH-MPTLLGAIIN
33=p            KMAL---ARERKTVKTLGIIMGTFILCWLPFFIVALVLPF---CESSCH-MPALLGAIIN
34==            KLEL---KRERKAARTLAIITGAFLICWLPFFIIALIGPF---VD--PEGIPPFARSFVL
35=p            KLEL---KRERKAARTLAIITGAFLICWLPFFIIALIGPF---VD--PEGIPPFARSFVL
36==            AADS---KRERKAAKTLAIITGAFVACWLPFFVLAILVPT---CD--CE-VSPVLTSLSL
                         * .           :                                    

14==            CACKMVACIDPFVYAISHPRYRMELQKRCP--WLALNE--KAPESSAVASTSTTQEP-QQ
15==            CTCKMVACIDPFVYAISHPRYRMELQKRCP--WLAISE--KAPESRAAISTSTTQEQ-QQ
16==            CTCKLVACIDPFVYAISHPRYRLELQKRCP--WLGVNE--KSGEISSAQST-TTQEQ-QQ
17==            CTCKLVACIEPFVYAISHPRYRMELQKRCP--WLGVNE--KSGEASSAQST-TTQEQTQQ
18==            LLAKSCSCYNPFVYAISHPKYRLAITQHLP--WFCV-H--ETETKSND----DSQSN--S
19==            LLAKSCSCYNPFVYAISHPKFRLAITQHLP--WFCV-H--EKDP--NDV--EENQSS--N
20==            CFAKSAACYNPIVYGISHPKYRLALKEKCP---CCVFG--KVD----DGKSSDAQSQ--A
21==            CFAKSAACYNPIVYGISHPKYRLALKEKCP---CCVFG--KVD----DGKSSDAQSQ--A
22==            CFAKSAACYNPIVYGISHPKYRLALKEKCP---CCVFG--KVD----DGKSSEAQSQ--A
23==            TFAKTSAVYNPIVYGISHPKYRIVLKEKCP---MCVFG--NTDEPKPDAPASDTE-----
24==            TFAKTSAVYNPIVYGISHPNDRLVLKEKCP---MCVCG--TTDEPKPDAPPSDTE-----
25==            LFAKANAVYNPIVYGISHPKYRAALFAKFPS-LACA------AEPSSDA-VSTTSGT--T
26==            VFAKANSCYNPIVYGISHPRYKAALYQRFPS-LACGSG-----ESGSDV---KSEAS--A
27==            LFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQF--DEKE-CEDANDAEEEVVASE
28==            MFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF--DDKE-TEDDKDAETEIPAGE
1==             FFAKSSALYNPVIYILMNKQFRNCMITTLC----CGKNPLGDDE--SGASTSKTEVSSVS
2==             FFAKTASIYNPIIYIMMNKQFRNCMLTSLC----CGKNPLGDDE--ASATASKTE-----
4=p             FFSKSSALYNPVIYVLLNKQFRNCMLTTIF----CGKNPLGDDE-SSTVSTSKTEVSSVS
5=p             FFSKTSALYNPVIYVLLNKQFRSCMLTTLF----CGKNPLGDEE-SSTVSTSKTEVSSVS
3==             FFSKSSSLYNPIIYVLMNKQFRNCMITTIC----CGKNPFGDEDVSSTVSQSKTEVSSVS
6==             CLSKASTVYNPVIYVLMNKQFRSCMMKMV-----CGKN-IEEDE--ASTSSQVTQVSSVA
7==             FFSKSACIYNPIIYCFMNKQFQACIMKMV-----CGKA-MTDES--DTCSSQKTEVSTVS
9==             FFAKSATIYNPVIYVFMNRQFRNCILQLF------G---KKVDDGSELSSASKTEVSSVS
10==            YFAKSATIYNPVIYVFMNRQFRNCILQLF------G---KKVDDGSELSSASKTEVSSVS
8=opsin_        ------------------------------------------------------------
11==            YFAKSATIYNPVIYVFMNRQFRNCIMQLF------G---KKVDDGSEASTTSRTEVSSVS
12==            YFAKSATIYNPIIYVFMNRQFRNCILQLF------G---KKVDDGSEVST-SRTEVSSVS
13==            YFSKTATVYNPIIYVFMNKQFQSCLLEMLC----CGYQPQRTGKASPGTPGPHADVTAAG
30==            WLGYANSLINPFIYAFFNRDLRPTSRSLLQ----CQY-RNINRKLSAAGMHEALKLAERP
31=p            WLGYANSLINPFIYAFFNRDLRTTYRSLLQ----CQY-RNINRKLSAAGMHEALKLAERP
29==            WLGYANSLINPFIYAFFNRDLRTTYRSLLQ----CQY-RNINRKLSAAGMHEALKLAERP
32==            WLGYSNSLLNPVIYAYFNKDFQNAFKKIIK----CKFCRQ--------------------
33=p            WLGYSNSLLNPVIYAYFNKDFQNAFKKIIK----CKFCRR--------------------
34==            WLGYFNSLLNPIIYTIFSPEFRSAFQKIL-----FGKYRRGHR-----------------
35=p            WLGYFNSLLNPIIYTIFSPEFRSAFQKIL-----FGKYRRGHR-----------------
36==            WLGYFNSTLNPVIYTVFSPEFRHAFQRLL-----CG--RRVRRRRAPQ------------
                                                                            

14==            TTAA--------------------------------------------------------
15==            TTAA--------------------------------------------------------
16==            TTAA--------------------------------------------------------
17==            TSAA--------------------------------------------------------
18==            TVAQDKA-----------------------------------------------------
19==            TQTQEKS-----------------------------------------------------
20==            TASEAE-SKA--------------------------------------------------
21==            TASEAE-SKA--------------------------------------------------
22==            TTSEAE-SKA--------------------------------------------------
23==            TTSEAD-SKA--------------------------------------------------
24==            TTSEAE-SKD--------------------------------------------------
25==            TVTDNEKSNA--------------------------------------------------
26==            TTTMEEKPKIPEA-----------------------------------------------
27==            R--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PPQGYPPQGAYPPPQGYPP
28==            SSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPPQGYPPQG-YPP-QGYPP
1==             T-SPVSPA----------------------------------------------------
2==             T-SQVAPA----------------------------------------------------
4=p             ------PA----------------------------------------------------
5=p             ------PA----------------------------------------------------
3==             S-SQVSPA----------------------------------------------------
6==             ------PEK---------------------------------------------------
7==             S-TQVGPN----------------------------------------------------
9==             ---SVSPA----------------------------------------------------
10==            ---SVSPA----------------------------------------------------
8=opsin_        ------------------------------------------------------------
11==            N-SSVAPA----------------------------------------------------
12==            N-SSVSPA----------------------------------------------------
13==            LRNKVMPAHPV-------------------------------------------------
30==            ERSEFVLQNSDHCGKKGHDT----------------------------------------
31=p            ERSEFVLQNSDHCGKKGHDT----------------------------------------
29==            ERPEFVLQNADYCRKKGHDS----------------------------------------
32==            ------------------------------------------------------------
33=p            ------------------------------------------------------------
34==            ------------------------------------------------------------
35=p            ------------------------------------------------------------
36==            ------------------------------------------------------------
                                                                            

14==            ----------------------------------------
15==            ----------------------------------------
16==            ----------------------------------------
17==            ----------------------------------------
18==            ----------------------------------------
19==            ----------------------------------------
20==            ----------------------------------------
21==            ----------------------------------------
22==            ----------------------------------------
23==            ----------------------------------------
24==            ----------------------------------------
25==            ----------------------------------------
26==            ----------------------------------------
27==            QGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA
28==            QGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA
1==             ----------------------------------------
2==             ----------------------------------------
4=p             ----------------------------------------
5=p             ----------------------------------------
3==             ----------------------------------------
6==             ----------------------------------------
7==             ----------------------------------------
9==             ----------------------------------------
10==            ----------------------------------------
8=opsin_        ----------------------------------------
11==            ----------------------------------------
12==            ----------------------------------------
13==            ----------------------------------------
30==            ----------------------------------------
31=p            ----------------------------------------
29==            ----------------------------------------
32==            ----------------------------------------
33=p            ----------------------------------------
34==            ----------------------------------------
35=p            ----------------------------------------
36==            ----------------------------------------