diff test-data/cuffcompare_out6.tracking @ 6:8e534225baa9 draft

Uploaded
author devteam
date Fri, 19 Dec 2014 11:55:55 -0500
parents 9d35cf35634e
children
line wrap: on
line diff
--- a/test-data/cuffcompare_out6.tracking	Thu Jan 09 14:27:37 2014 -0500
+++ b/test-data/cuffcompare_out6.tracking	Fri Dec 19 11:55:55 2014 -0500
@@ -17,9 +17,9 @@
 TCONS_00000017	XLOC_000021	-	u	q1:CUFF.55|CUFF.55.1|100|31.293533|0.000000|75.549272|2.000000|-	-
 TCONS_00000018	XLOC_000022	-	u	q1:CUFF.57|CUFF.57.1|100|15.646767|0.000000|46.940300|1.000000|-	-
 TCONS_00000019	XLOC_000023	-	u	q1:CUFF.59|CUFF.59.1|100|15.646767|0.000000|46.940300|1.000000|-	-
-TCONS_00000020	XLOC_000025	-	u	q1:CUFF.7|CUFF.7.1|100|9.999117|0.000000|19.998234|0.639053|-	-
+TCONS_00000020	XLOC_000025	-	.	q1:CUFF.7|CUFF.7.1|100|9.999117|0.000000|19.998234|0.639053|169	q2:CUFF.23|CUFF.23.1|100|16.205195|0.000000|34.917342|0.920455|88
 TCONS_00000021	XLOC_000026	-	u	q1:CUFF.5|CUFF.5.1|100|31.293533|0.000000|75.549272|2.000000|-	-
-TCONS_00000022	XLOC_000029	-	u	q1:CUFF.9|CUFF.9.1|100|17.776896|9.153835|26.399957|1.136139|-	-
+TCONS_00000022	XLOC_000029	-	.	q1:CUFF.9|CUFF.9.1|100|17.776896|9.153835|26.399957|1.136139|404	q2:CUFF.25|CUFF.25.1|100|35.211287|0.000000|85.007567|2.000000|27
 TCONS_00000023	XLOC_000031	-	u	q1:CUFF.11|CUFF.11.1|100|31.293533|0.000000|75.549272|2.000000|-	-
 TCONS_00000024	XLOC_000034	Xkr4|Xkr4	i	q1:CUFF.15|CUFF.15.1|100|10.695258|0.000000|25.820637|0.683544|-	-
 TCONS_00000025	XLOC_000035	Xkr4|Xkr4	i	q1:CUFF.19|CUFF.19.1|100|29.337687|3.097262|55.578113|1.875000|-	-
@@ -58,43 +58,41 @@
 TCONS_00000058	XLOC_000013	-	u	-	q2:CUFF.15|CUFF.15.1|100|35.211287|0.000000|85.007567|2.000000|-
 TCONS_00000059	XLOC_000018	-	u	-	q2:CUFF.17|CUFF.17.1|100|35.211287|0.000000|85.007567|2.000000|-
 TCONS_00000060	XLOC_000024	-	u	-	q2:CUFF.19|CUFF.19.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000061	XLOC_000025	-	u	-	q2:CUFF.23|CUFF.23.1|100|16.205195|0.000000|34.917342|0.920455|-
-TCONS_00000062	XLOC_000027	-	u	-	q2:CUFF.21|CUFF.21.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000063	XLOC_000028	-	u	-	q2:CUFF.26|CUFF.26.1|100|29.709524|0.000000|71.725135|1.687500|-
-TCONS_00000064	XLOC_000029	-	u	-	q2:CUFF.25|CUFF.25.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000065	XLOC_000030	-	u	-	q2:CUFF.29|CUFF.29.1|100|13.581496|0.000000|32.788633|0.771429|-
-TCONS_00000066	XLOC_000032	-	u	-	q2:CUFF.31|CUFF.31.1|100|22.635827|0.000000|45.271655|1.285714|-
-TCONS_00000067	XLOC_000033	Xkr4|Xkr4	i	-	q2:CUFF.33|CUFF.33.1|100|23.767619|0.000000|57.380108|1.350000|-
-TCONS_00000068	XLOC_000036	Xkr4|Xkr4	i	-	q2:CUFF.35|CUFF.35.1|100|11.317914|0.000000|27.323861|0.642857|-
-TCONS_00000069	XLOC_000037	Xkr4|Xkr4	i	-	q2:CUFF.37|CUFF.37.1|100|11.500461|0.000000|24.780049|0.653226|-
-TCONS_00000070	XLOC_000038	Xkr4|Xkr4	i	-	q2:CUFF.39|CUFF.39.1|100|52.816931|0.000000|113.804669|3.000000|-
-TCONS_00000071	XLOC_000039	Xkr4|Xkr4	i	-	q2:CUFF.41|CUFF.41.1|100|43.213852|0.000000|93.112911|2.454545|-
-TCONS_00000072	XLOC_000041	Xkr4|Xkr4	i	-	q2:CUFF.43|CUFF.43.1|100|23.474191|0.000000|46.948383|1.333333|-
-TCONS_00000073	XLOC_000043	Xkr4|Xkr4	i	-	q2:CUFF.45|CUFF.45.1|100|20.667495|0.000000|49.895746|1.173913|-
-TCONS_00000074	XLOC_000045	Xkr4|Xkr4	i	-	q2:CUFF.47|CUFF.47.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000075	XLOC_000047	Xkr4|Xkr4	i	-	q2:CUFF.49|CUFF.49.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000076	XLOC_000049	Xkr4|Xkr4	i	-	q2:CUFF.51|CUFF.51.1|100|14.948188|7.228977|22.667399|0.849057|-
-TCONS_00000077	XLOC_000050	Xkr4|Xkr4	i	-	q2:CUFF.53|CUFF.53.1|100|52.816931|0.000000|113.804669|3.000000|-
-TCONS_00000078	XLOC_000051	Xkr4|Xkr4	i	-	q2:CUFF.55|CUFF.55.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000079	XLOC_000053	Xkr4|Xkr4	i	-	q2:CUFF.57|CUFF.57.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000080	XLOC_000054	Xkr4|Xkr4	i	-	q2:CUFF.59|CUFF.59.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000081	XLOC_000055	Xkr4|Xkr4	i	-	q2:CUFF.61|CUFF.61.1|100|13.204233|0.000000|31.877838|0.750000|-
-TCONS_00000082	XLOC_000056	Xkr4|Xkr4	i	-	q2:CUFF.63|CUFF.63.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000083	XLOC_000058	Xkr4|Xkr4	i	-	q2:CUFF.65|CUFF.65.1|100|31.170648|0.000000|62.341295|1.770492|-
-TCONS_00000084	XLOC_000059	Xkr4|Xkr4	i	-	q2:CUFF.69|CUFF.69.1|100|18.799247|8.750627|28.847866|1.067797|-
-TCONS_00000085	XLOC_000060	Xkr4|Xkr4	i	-	q2:CUFF.67|CUFF.67.1|100|15.681351|3.378764|27.983938|0.890700|-
-TCONS_00000086	XLOC_000061	Xkr4|Xkr4	i	-	q2:CUFF.71|CUFF.71.1|100|22.635827|0.000000|54.647722|1.285714|-
-TCONS_00000087	XLOC_000063	Xkr4|Xkr4	i	-	q2:CUFF.73|CUFF.73.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000088	XLOC_000064	Xkr4|Xkr4	i	-	q2:CUFF.75|CUFF.75.1|100|52.816931|0.000000|113.804669|3.000000|-
-TCONS_00000089	XLOC_000066	Xkr4|Xkr4	i	-	q2:CUFF.77|CUFF.77.1|100|17.605644|0.000000|52.816931|1.000000|-
-TCONS_00000090	XLOC_000067	Xkr4|Xkr4	i	-	q2:CUFF.79|CUFF.79.1|100|13.390208|0.000000|32.326821|0.760563|-
-TCONS_00000091	XLOC_000068	Xkr4|Xkr4	i	-	q2:CUFF.81|CUFF.81.1|100|11.211141|1.183592|21.238690|0.636792|-
-TCONS_00000092	XLOC_000069	Xkr4|Xkr4	i	-	q2:CUFF.83|CUFF.83.1|100|21.126772|0.000000|51.004540|1.200000|-
-TCONS_00000093	XLOC_000070	Xkr4|Xkr4	i	-	q2:CUFF.85|CUFF.85.1|100|19.014095|0.000000|38.028190|1.080000|-
-TCONS_00000094	XLOC_000072	Xkr4|Xkr4	i	-	q2:CUFF.87|CUFF.87.1|100|24.170460|0.000000|52.080103|1.372881|-
-TCONS_00000095	XLOC_000074	Xkr4|Xkr4	i	-	q2:CUFF.89|CUFF.89.1|100|29.709524|0.000000|64.015126|1.687500|-
-TCONS_00000096	XLOC_000076	Xkr4|Xkr4	i	-	q2:CUFF.91|CUFF.91.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000097	XLOC_000078	Xkr4|Xkr4	i	-	q2:CUFF.93|CUFF.93.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000098	XLOC_000079	Xkr4|Xkr4	i	-	q2:CUFF.95|CUFF.95.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000099	XLOC_000081	Xkr4|Xkr4	i	-	q2:CUFF.97|CUFF.97.1|100|35.211287|0.000000|85.007567|2.000000|-
-TCONS_00000100	XLOC_000082	Xkr4|Xkr4	i	-	q2:CUFF.99|CUFF.99.1|100|19.602160|0.000000|39.204320|1.113402|-
+TCONS_00000061	XLOC_000027	-	u	-	q2:CUFF.21|CUFF.21.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000062	XLOC_000028	-	u	-	q2:CUFF.26|CUFF.26.1|100|29.709524|0.000000|71.725135|1.687500|-
+TCONS_00000063	XLOC_000030	-	u	-	q2:CUFF.29|CUFF.29.1|100|13.581496|0.000000|32.788633|0.771429|-
+TCONS_00000064	XLOC_000032	-	u	-	q2:CUFF.31|CUFF.31.1|100|22.635827|0.000000|45.271655|1.285714|-
+TCONS_00000065	XLOC_000033	Xkr4|Xkr4	i	-	q2:CUFF.33|CUFF.33.1|100|23.767619|0.000000|57.380108|1.350000|-
+TCONS_00000066	XLOC_000036	Xkr4|Xkr4	i	-	q2:CUFF.35|CUFF.35.1|100|11.317914|0.000000|27.323861|0.642857|-
+TCONS_00000067	XLOC_000037	Xkr4|Xkr4	i	-	q2:CUFF.37|CUFF.37.1|100|11.500461|0.000000|24.780049|0.653226|-
+TCONS_00000068	XLOC_000038	Xkr4|Xkr4	i	-	q2:CUFF.39|CUFF.39.1|100|52.816931|0.000000|113.804669|3.000000|-
+TCONS_00000069	XLOC_000039	Xkr4|Xkr4	i	-	q2:CUFF.41|CUFF.41.1|100|43.213852|0.000000|93.112911|2.454545|-
+TCONS_00000070	XLOC_000041	Xkr4|Xkr4	i	-	q2:CUFF.43|CUFF.43.1|100|23.474191|0.000000|46.948383|1.333333|-
+TCONS_00000071	XLOC_000043	Xkr4|Xkr4	i	-	q2:CUFF.45|CUFF.45.1|100|20.667495|0.000000|49.895746|1.173913|-
+TCONS_00000072	XLOC_000045	Xkr4|Xkr4	i	-	q2:CUFF.47|CUFF.47.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000073	XLOC_000047	Xkr4|Xkr4	i	-	q2:CUFF.49|CUFF.49.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000074	XLOC_000049	Xkr4|Xkr4	i	-	q2:CUFF.51|CUFF.51.1|100|14.948188|7.228977|22.667399|0.849057|-
+TCONS_00000075	XLOC_000050	Xkr4|Xkr4	i	-	q2:CUFF.53|CUFF.53.1|100|52.816931|0.000000|113.804669|3.000000|-
+TCONS_00000076	XLOC_000051	Xkr4|Xkr4	i	-	q2:CUFF.55|CUFF.55.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000077	XLOC_000053	Xkr4|Xkr4	i	-	q2:CUFF.57|CUFF.57.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000078	XLOC_000054	Xkr4|Xkr4	i	-	q2:CUFF.59|CUFF.59.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000079	XLOC_000055	Xkr4|Xkr4	i	-	q2:CUFF.61|CUFF.61.1|100|13.204233|0.000000|31.877838|0.750000|-
+TCONS_00000080	XLOC_000056	Xkr4|Xkr4	i	-	q2:CUFF.63|CUFF.63.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000081	XLOC_000058	Xkr4|Xkr4	i	-	q2:CUFF.65|CUFF.65.1|100|31.170648|0.000000|62.341295|1.770492|-
+TCONS_00000082	XLOC_000059	Xkr4|Xkr4	i	-	q2:CUFF.69|CUFF.69.1|100|18.799247|8.750627|28.847866|1.067797|-
+TCONS_00000083	XLOC_000060	Xkr4|Xkr4	i	-	q2:CUFF.67|CUFF.67.1|100|15.681351|3.378764|27.983938|0.890700|-
+TCONS_00000084	XLOC_000061	Xkr4|Xkr4	i	-	q2:CUFF.71|CUFF.71.1|100|22.635827|0.000000|54.647722|1.285714|-
+TCONS_00000085	XLOC_000063	Xkr4|Xkr4	i	-	q2:CUFF.73|CUFF.73.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000086	XLOC_000064	Xkr4|Xkr4	i	-	q2:CUFF.75|CUFF.75.1|100|52.816931|0.000000|113.804669|3.000000|-
+TCONS_00000087	XLOC_000066	Xkr4|Xkr4	i	-	q2:CUFF.77|CUFF.77.1|100|17.605644|0.000000|52.816931|1.000000|-
+TCONS_00000088	XLOC_000067	Xkr4|Xkr4	i	-	q2:CUFF.79|CUFF.79.1|100|13.390208|0.000000|32.326821|0.760563|-
+TCONS_00000089	XLOC_000068	Xkr4|Xkr4	i	-	q2:CUFF.81|CUFF.81.1|100|11.211141|1.183592|21.238690|0.636792|-
+TCONS_00000090	XLOC_000069	Xkr4|Xkr4	i	-	q2:CUFF.83|CUFF.83.1|100|21.126772|0.000000|51.004540|1.200000|-
+TCONS_00000091	XLOC_000070	Xkr4|Xkr4	i	-	q2:CUFF.85|CUFF.85.1|100|19.014095|0.000000|38.028190|1.080000|-
+TCONS_00000092	XLOC_000072	Xkr4|Xkr4	i	-	q2:CUFF.87|CUFF.87.1|100|24.170460|0.000000|52.080103|1.372881|-
+TCONS_00000093	XLOC_000074	Xkr4|Xkr4	i	-	q2:CUFF.89|CUFF.89.1|100|29.709524|0.000000|64.015126|1.687500|-
+TCONS_00000094	XLOC_000076	Xkr4|Xkr4	i	-	q2:CUFF.91|CUFF.91.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000095	XLOC_000078	Xkr4|Xkr4	i	-	q2:CUFF.93|CUFF.93.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000096	XLOC_000079	Xkr4|Xkr4	i	-	q2:CUFF.95|CUFF.95.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000097	XLOC_000081	Xkr4|Xkr4	i	-	q2:CUFF.97|CUFF.97.1|100|35.211287|0.000000|85.007567|2.000000|-
+TCONS_00000098	XLOC_000082	Xkr4|Xkr4	i	-	q2:CUFF.99|CUFF.99.1|100|19.602160|0.000000|39.204320|1.113402|-