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view test-data/cuffcompare_out7.txt @ 2:8b22e9adae34

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Update to the new data table specification.
author Dave Bouvier <dave@bx.psu.edu>
date Wed, 04 Dec 2013 13:24:29 -0500
parents 9d35cf35634e
children 8e534225baa9
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# Cuffcompare v2.0.2 | Command line was:
#cuffcompare -o cc_output -r /Users/jeremy/projects/galaxy-central/database/files/002/dataset_2770.dat -R ./input1 ./input2
#

#= Summary for dataset: ./input1 :
#     Query mRNAs :      50 in      50 loci  (0 multi-exon transcripts)
#            (0 multi-transcript loci, ~1.0 transcripts per locus)
# Reference mRNAs :       1 in       1 loci  (1 multi-exon)
# Corresponding super-loci:              1
#--------------------|   Sn   |  Sp   |  fSn |  fSp  
        Base level: 	  2.2	  2.3	  - 	  - 
        Exon level: 	  0.0	  0.0	  0.0	  0.0
      Intron level: 	  0.0	  nan	  0.0	  nan
Intron chain level: 	  0.0	  nan	  0.0	  nan
  Transcript level: 	  0.0	  0.0	  0.0	  0.0
       Locus level: 	  0.0	  0.0	  0.0	  0.0

Matching intron chains:       0
         Matching loci:       0

          Missed exons:       2/3	( 66.7%)
           Novel exons:      49/50	( 98.0%)
        Missed introns:       2/2	(100.0%)
           Missed loci:       0/1	(  0.0%)
            Novel loci:      49/50	( 98.0%)

#= Summary for dataset: ./input2 :
#     Query mRNAs :      50 in      50 loci  (0 multi-exon transcripts)
#            (0 multi-transcript loci, ~1.0 transcripts per locus)
# Reference mRNAs :       0 in       0 loci  (0 multi-exon)

 Total union super-loci across all input datasets: 87 
  (0 multi-transcript, ~1.1 transcripts per locus)